Protein–RNA interactions for Protein: A0A075B5Z8

Trav6-1, T cell receptor alpha variable 6-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-1A0A075B5Z8 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
Trav6-1A0A075B5Z8 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC14.59□□□□□ -0.07
Trav6-1A0A075B5Z8 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC14.59□□□□□ -0.07
Trav6-1A0A075B5Z8 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC14.59□□□□□ -0.07
Trav6-1A0A075B5Z8 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
Trav6-1A0A075B5Z8 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav6-1A0A075B5Z8 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav6-1A0A075B5Z8 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav6-1A0A075B5Z8 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Trav6-1A0A075B5Z8 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav6-1A0A075B5Z8 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav6-1A0A075B5Z8 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trav6-1A0A075B5Z8 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trav6-1A0A075B5Z8 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trav6-1A0A075B5Z8 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav6-1A0A075B5Z8 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Trav6-1A0A075B5Z8 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trav6-1A0A075B5Z8 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav6-1A0A075B5Z8 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trav6-1A0A075B5Z8 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav6-1A0A075B5Z8 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav6-1A0A075B5Z8 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav6-1A0A075B5Z8 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trav6-1A0A075B5Z8 Gm26833-201ENSMUST00000180899 440 ntBASIC14.58□□□□□ -0.08
Trav6-1A0A075B5Z8 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Trav6-1A0A075B5Z8 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC14.58□□□□□ -0.08
Trav6-1A0A075B5Z8 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trav6-1A0A075B5Z8 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav6-1A0A075B5Z8 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Trav6-1A0A075B5Z8 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Trav6-1A0A075B5Z8 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav6-1A0A075B5Z8 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav6-1A0A075B5Z8 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Trav6-1A0A075B5Z8 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav6-1A0A075B5Z8 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav6-1A0A075B5Z8 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav6-1A0A075B5Z8 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav6-1A0A075B5Z8 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trav6-1A0A075B5Z8 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav6-1A0A075B5Z8 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav6-1A0A075B5Z8 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav6-1A0A075B5Z8 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
Trav6-1A0A075B5Z8 Gm21956-201ENSMUST00000179946 522 ntBASIC14.57□□□□□ -0.08
Trav6-1A0A075B5Z8 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav6-1A0A075B5Z8 CT010467.1-202ENSMUST00000205406 714 ntBASIC14.57□□□□□ -0.08
Trav6-1A0A075B5Z8 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
Trav6-1A0A075B5Z8 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
Trav6-1A0A075B5Z8 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC14.57□□□□□ -0.08
Trav6-1A0A075B5Z8 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav6-1A0A075B5Z8 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trav6-1A0A075B5Z8 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav6-1A0A075B5Z8 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav6-1A0A075B5Z8 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trav6-1A0A075B5Z8 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav6-1A0A075B5Z8 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav6-1A0A075B5Z8 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC14.56□□□□□ -0.08
Trav6-1A0A075B5Z8 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav6-1A0A075B5Z8 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav6-1A0A075B5Z8 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav6-1A0A075B5Z8 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav6-1A0A075B5Z8 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC14.56□□□□□ -0.08
Trav6-1A0A075B5Z8 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC14.56□□□□□ -0.08
Trav6-1A0A075B5Z8 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav6-1A0A075B5Z8 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav6-1A0A075B5Z8 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav6-1A0A075B5Z8 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Trav6-1A0A075B5Z8 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav6-1A0A075B5Z8 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav6-1A0A075B5Z8 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav6-1A0A075B5Z8 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav6-1A0A075B5Z8 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav6-1A0A075B5Z8 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Trav6-1A0A075B5Z8 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trav6-1A0A075B5Z8 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC14.56□□□□□ -0.08
Trav6-1A0A075B5Z8 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav6-1A0A075B5Z8 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav6-1A0A075B5Z8 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trav6-1A0A075B5Z8 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC14.55□□□□□ -0.08
Trav6-1A0A075B5Z8 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trav6-1A0A075B5Z8 Gm37374-201ENSMUST00000194954 1829 ntBASIC14.55□□□□□ -0.08
Trav6-1A0A075B5Z8 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trav6-1A0A075B5Z8 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav6-1A0A075B5Z8 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trav6-1A0A075B5Z8 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav6-1A0A075B5Z8 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav6-1A0A075B5Z8 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trav6-1A0A075B5Z8 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav6-1A0A075B5Z8 Gm40848-201ENSMUST00000221998 324 ntBASIC14.55□□□□□ -0.08
Trav6-1A0A075B5Z8 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trav6-1A0A075B5Z8 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav6-1A0A075B5Z8 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav6-1A0A075B5Z8 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav6-1A0A075B5Z8 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav6-1A0A075B5Z8 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav6-1A0A075B5Z8 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav6-1A0A075B5Z8 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav6-1A0A075B5Z8 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav6-1A0A075B5Z8 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trav6-1A0A075B5Z8 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav6-1A0A075B5Z8 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms