Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 4930563E22Rik-201ENSMUST00000066087 3313 ntBASIC8.32□□□□□ -1.08
Trim47Q8C0E3 Zfp85os-201ENSMUST00000049518 2624 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Trim47Q8C0E3 Crnkl1-201ENSMUST00000001818 3428 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Trim47Q8C0E3 Atp5h-203ENSMUST00000106537 682 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
Trim47Q8C0E3 Gm13871-201ENSMUST00000107318 936 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
Trim47Q8C0E3 Gm11757-201ENSMUST00000107320 936 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
Trim47Q8C0E3 Gm11758-201ENSMUST00000107326 936 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
Trim47Q8C0E3 Klra3-202ENSMUST00000111998 1238 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Trim47Q8C0E3 Fate1-202ENSMUST00000114569 1053 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
Trim47Q8C0E3 Gm14981-201ENSMUST00000117325 943 ntBASIC8.32□□□□□ -1.08
Trim47Q8C0E3 Gm13130-201ENSMUST00000119195 1166 ntBASIC8.32□□□□□ -1.08
Trim47Q8C0E3 Gm15763-201ENSMUST00000120136 403 ntBASIC8.32□□□□□ -1.08
Trim47Q8C0E3 Gm13525-201ENSMUST00000120607 478 ntBASIC8.32□□□□□ -1.08
Trim47Q8C0E3 Cyp4a29-ps1-201ENSMUST00000120882 171 ntBASIC8.32□□□□□ -1.08
Trim47Q8C0E3 Gm15762-201ENSMUST00000126447 333 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Trim47Q8C0E3 Gm12239-201ENSMUST00000134285 500 ntTSL 5 BASIC8.32□□□□□ -1.08
Trim47Q8C0E3 1700011I03Rik-204ENSMUST00000135806 831 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Trim47Q8C0E3 9130015L21Rik-201ENSMUST00000140319 606 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Trim47Q8C0E3 Gm14376-201ENSMUST00000145297 297 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Trim47Q8C0E3 Gm16096-202ENSMUST00000149386 819 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Trim47Q8C0E3 Sox5os2-201ENSMUST00000156443 627 ntTSL 3 BASIC8.32□□□□□ -1.08
Trim47Q8C0E3 Gm8895-201ENSMUST00000172300 1223 ntBASIC8.32□□□□□ -1.08
Trim47Q8C0E3 Olfr296-ps1-201ENSMUST00000173904 1102 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
Trim47Q8C0E3 Obox3-ps4-201ENSMUST00000176026 1005 ntBASIC8.32□□□□□ -1.08
Trim47Q8C0E3 Gm6556-201ENSMUST00000181118 362 ntTSL 5 BASIC8.32□□□□□ -1.08
Trim47Q8C0E3 Gm21430-201ENSMUST00000182998 998 ntBASIC8.32□□□□□ -1.08
Trim47Q8C0E3 Gm28997-201ENSMUST00000188759 429 ntBASIC8.32□□□□□ -1.08
Trim47Q8C0E3 Gm18865-201ENSMUST00000193011 1171 ntBASIC8.32□□□□□ -1.08
Trim47Q8C0E3 Csn2-209ENSMUST00000199624 890 ntAPPRIS P3 TSL 5 BASIC8.32□□□□□ -1.08
Trim47Q8C0E3 Gm44418-201ENSMUST00000204219 705 ntTSL 3 BASIC8.32□□□□□ -1.08
Trim47Q8C0E3 Gm45198-201ENSMUST00000206796 591 ntBASIC8.32□□□□□ -1.08
Trim47Q8C0E3 Gm17992-201ENSMUST00000207346 1072 ntBASIC8.32□□□□□ -1.08
Trim47Q8C0E3 Olfr566-202ENSMUST00000209952 1066 ntAPPRIS ALT1 TSL 3 BASIC8.32□□□□□ -1.08
Trim47Q8C0E3 Gm45435-201ENSMUST00000211147 475 ntTSL 5 BASIC8.32□□□□□ -1.08
Trim47Q8C0E3 Gm31045-201ENSMUST00000211266 922 ntTSL 5 BASIC8.32□□□□□ -1.08
Trim47Q8C0E3 Olfr291-201ENSMUST00000211582 1159 ntAPPRIS P2 TSL 2 BASIC8.32□□□□□ -1.08
Trim47Q8C0E3 5330439M10Rik-201ENSMUST00000218667 348 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Trim47Q8C0E3 AC079644.1-201ENSMUST00000220586 405 ntBASIC8.32□□□□□ -1.08
Trim47Q8C0E3 CT009713.5-201ENSMUST00000224508 909 ntBASIC8.32□□□□□ -1.08
Trim47Q8C0E3 AC140267.1-201ENSMUST00000226485 213 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
Trim47Q8C0E3 Myl12a-201ENSMUST00000024846 980 ntAPPRIS P1 TSL 2 BASIC8.32□□□□□ -1.08
Trim47Q8C0E3 Fate1-201ENSMUST00000066116 938 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Trim47Q8C0E3 Olfr566-201ENSMUST00000071393 951 ntAPPRIS P2 BASIC8.32□□□□□ -1.08
Trim47Q8C0E3 Olfr741-201ENSMUST00000071932 936 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
Trim47Q8C0E3 Olfr295-201ENSMUST00000078447 930 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
Trim47Q8C0E3 Sval3-201ENSMUST00000080742 550 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Trim47Q8C0E3 Cd40-203ENSMUST00000081310 668 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Trim47Q8C0E3 Olfr390-201ENSMUST00000092919 936 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
Trim47Q8C0E3 Olfr1271-201ENSMUST00000099751 918 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
Trim47Q8C0E3 Olfr1162-201ENSMUST00000099837 945 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
Trim47Q8C0E3 Plb1-205ENSMUST00000202201 3539 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Trim47Q8C0E3 Ptgfr-202ENSMUST00000106126 1535 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Trim47Q8C0E3 Cyp4a30b-201ENSMUST00000119958 1527 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
Trim47Q8C0E3 Arl15-201ENSMUST00000091201 3364 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Trim47Q8C0E3 Rufy3-201ENSMUST00000031229 4049 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Trim47Q8C0E3 Mettl21e-201ENSMUST00000054801 3211 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Trim47Q8C0E3 Sptssb-201ENSMUST00000051239 1795 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Trim47Q8C0E3 Gm43686-201ENSMUST00000197351 2439 ntBASIC8.32□□□□□ -1.08
Trim47Q8C0E3 Adgrl2-202ENSMUST00000106128 6052 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
Trim47Q8C0E3 Olfr381-204ENSMUST00000215358 2658 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
Trim47Q8C0E3 Gm37109-201ENSMUST00000195475 2254 ntBASIC8.32□□□□□ -1.08
Trim47Q8C0E3 Ccdc150-201ENSMUST00000027128 3807 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Trim47Q8C0E3 Gm43519-201ENSMUST00000197239 1872 ntBASIC8.32□□□□□ -1.08
Trim47Q8C0E3 Acad11-201ENSMUST00000047799 3444 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Trim47Q8C0E3 4921525O09Rik-201ENSMUST00000220691 3270 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Trim47Q8C0E3 Prpf18-201ENSMUST00000035721 3522 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Trim47Q8C0E3 Dbhos-201ENSMUST00000150024 4020 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Trim47Q8C0E3 Ggta1-205ENSMUST00000113002 3391 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
Trim47Q8C0E3 Pan2-203ENSMUST00000218315 4379 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
Trim47Q8C0E3 E330013P04Rik-203ENSMUST00000190698 2996 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Trim47Q8C0E3 Gm16638-202ENSMUST00000208892 8508 ntTSL 5 BASIC8.31□□□□□ -1.08
Trim47Q8C0E3 Gm5286-201ENSMUST00000159524 1593 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
Trim47Q8C0E3 Unc45b-202ENSMUST00000108160 4152 ntAPPRIS ALT1 TSL 5 BASIC8.31□□□□□ -1.08
Trim47Q8C0E3 Zfp882-201ENSMUST00000110002 3152 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Trim47Q8C0E3 4921509C19Rik-201ENSMUST00000080132 2684 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Trim47Q8C0E3 Fam19a1-201ENSMUST00000075080 2411 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Trim47Q8C0E3 Gm43665-201ENSMUST00000198672 1659 ntBASIC8.31□□□□□ -1.08
Trim47Q8C0E3 Crisp2-201ENSMUST00000024724 1438 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Trim47Q8C0E3 5330416C01Rik-203ENSMUST00000144993 3287 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Trim47Q8C0E3 Celf5-204ENSMUST00000120856 3861 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Trim47Q8C0E3 Muc6-203ENSMUST00000190907 8757 ntAPPRIS P5 TSL 5 BASIC8.31□□□□□ -1.08
Trim47Q8C0E3 Gm18537-202ENSMUST00000206215 1503 ntBASIC8.31□□□□□ -1.08
Trim47Q8C0E3 AC138221.1-201ENSMUST00000216180 4944 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
Trim47Q8C0E3 Gm25614-201ENSMUST00000104013 133 ntBASIC8.31□□□□□ -1.08
Trim47Q8C0E3 Rpl22-ps1-201ENSMUST00000118652 386 ntBASIC8.31□□□□□ -1.08
Trim47Q8C0E3 Gm13463-201ENSMUST00000119020 233 ntBASIC8.31□□□□□ -1.08
Trim47Q8C0E3 Gm13877-201ENSMUST00000120614 417 ntBASIC8.31□□□□□ -1.08
Trim47Q8C0E3 Gm16057-201ENSMUST00000120811 759 ntBASIC8.31□□□□□ -1.08
Trim47Q8C0E3 Gm12754-201ENSMUST00000121908 454 ntBASIC8.31□□□□□ -1.08
Trim47Q8C0E3 Gm13602-201ENSMUST00000122405 493 ntBASIC8.31□□□□□ -1.08
Trim47Q8C0E3 Ccdc142os-201ENSMUST00000125657 891 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Trim47Q8C0E3 Gm7546-201ENSMUST00000146119 966 ntTSL 3 BASIC8.31□□□□□ -1.08
Trim47Q8C0E3 Gm15787-207ENSMUST00000152014 885 ntTSL 2 BASIC8.31□□□□□ -1.08
Trim47Q8C0E3 Gm13923-201ENSMUST00000153283 288 ntTSL 3 BASIC8.31□□□□□ -1.08
Trim47Q8C0E3 Gm15790-201ENSMUST00000161109 1251 ntBASIC8.31□□□□□ -1.08
Trim47Q8C0E3 Mgst2-206ENSMUST00000161590 481 ntTSL 3 BASIC8.31□□□□□ -1.08
Trim47Q8C0E3 Gm15914-201ENSMUST00000161922 309 ntBASIC8.31□□□□□ -1.08
Trim47Q8C0E3 Gm17085-201ENSMUST00000165425 502 ntBASIC8.31□□□□□ -1.08
Trim47Q8C0E3 Vmn1r88-201ENSMUST00000171783 951 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
Trim47Q8C0E3 Gm11392-201ENSMUST00000181419 710 ntBASIC8.31□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 152.7 ms