Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Gm3519-201ENSMUST00000196113 1676 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Trim35Q8C006 Eml1-202ENSMUST00000109857 2627 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Trim35Q8C006 Utp6-202ENSMUST00000108241 2308 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trim35Q8C006 AC123665.5-201ENSMUST00000226648 1392 ntBASIC9.3□□□□□ -0.92
Trim35Q8C006 Glb1l2-205ENSMUST00000162252 2209 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Trim35Q8C006 Gstm6-205ENSMUST00000106685 1153 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trim35Q8C006 Defb5-201ENSMUST00000110763 207 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trim35Q8C006 Gm7821-201ENSMUST00000117111 788 ntBASIC9.3□□□□□ -0.92
Trim35Q8C006 Gm12053-201ENSMUST00000119022 252 ntBASIC9.3□□□□□ -0.92
Trim35Q8C006 Myl12a-202ENSMUST00000123686 804 ntAPPRIS P1 TSL 5 BASIC9.3□□□□□ -0.92
Trim35Q8C006 Gm11534-202ENSMUST00000129261 470 ntTSL 3 BASIC9.3□□□□□ -0.92
Trim35Q8C006 Gm11842-201ENSMUST00000130117 556 ntTSL 5 BASIC9.3□□□□□ -0.92
Trim35Q8C006 Gm23124-201ENSMUST00000157650 107 ntBASIC9.3□□□□□ -0.92
Trim35Q8C006 Gm23894-201ENSMUST00000158107 313 ntBASIC9.3□□□□□ -0.92
Trim35Q8C006 Gm15812-201ENSMUST00000162331 748 ntBASIC9.3□□□□□ -0.92
Trim35Q8C006 Gm20396-201ENSMUST00000173358 745 ntBASIC9.3□□□□□ -0.92
Trim35Q8C006 Atad3aos-204ENSMUST00000174185 482 ntTSL 3 BASIC9.3□□□□□ -0.92
Trim35Q8C006 Mir6355-201ENSMUST00000183687 106 ntBASIC9.3□□□□□ -0.92
Trim35Q8C006 Mir6934-201ENSMUST00000183965 62 ntBASIC9.3□□□□□ -0.92
Trim35Q8C006 2310043O21Rik-201ENSMUST00000185323 622 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Trim35Q8C006 Gm28406-201ENSMUST00000186516 397 ntTSL 5 BASIC9.3□□□□□ -0.92
Trim35Q8C006 Gm29404-201ENSMUST00000187914 397 ntTSL 5 BASIC9.3□□□□□ -0.92
Trim35Q8C006 Gm28313-201ENSMUST00000191411 397 ntTSL 5 BASIC9.3□□□□□ -0.92
Trim35Q8C006 Gm35670-201ENSMUST00000192493 397 ntTSL 5 BASIC9.3□□□□□ -0.92
Trim35Q8C006 Gm37656-201ENSMUST00000192673 397 ntTSL 5 BASIC9.3□□□□□ -0.92
Trim35Q8C006 Gm43777-201ENSMUST00000197269 376 ntTSL 3 BASIC9.3□□□□□ -0.92
Trim35Q8C006 Gm20940-201ENSMUST00000197308 360 ntBASIC9.3□□□□□ -0.92
Trim35Q8C006 Gm9173-201ENSMUST00000198054 400 ntBASIC9.3□□□□□ -0.92
Trim35Q8C006 Gm43110-201ENSMUST00000198877 226 ntBASIC9.3□□□□□ -0.92
Trim35Q8C006 Spa17-201ENSMUST00000002013 696 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trim35Q8C006 Olfr278-ps1-201ENSMUST00000205676 238 ntBASIC9.3□□□□□ -0.92
Trim35Q8C006 LOC665443-201ENSMUST00000212284 796 ntBASIC9.3□□□□□ -0.92
Trim35Q8C006 Gm29154-203ENSMUST00000213151 905 ntTSL 5 BASIC9.3□□□□□ -0.92
Trim35Q8C006 Gm9662-201ENSMUST00000216748 1206 ntBASIC9.3□□□□□ -0.92
Trim35Q8C006 AC154472.2-201ENSMUST00000221186 288 ntTSL 5 BASIC9.3□□□□□ -0.92
Trim35Q8C006 AC133498.1-206ENSMUST00000223254 385 ntTSL 5 BASIC9.3□□□□□ -0.92
Trim35Q8C006 AC165159.1-201ENSMUST00000223825 631 ntBASIC9.3□□□□□ -0.92
Trim35Q8C006 AC159256.1-201ENSMUST00000224298 1039 ntBASIC9.3□□□□□ -0.92
Trim35Q8C006 1810011H11Rik-202ENSMUST00000227060 496 ntBASIC9.3□□□□□ -0.92
Trim35Q8C006 Olfr250-201ENSMUST00000052085 996 ntAPPRIS P2 BASIC9.3□□□□□ -0.92
Trim35Q8C006 Olfr49-201ENSMUST00000059996 1030 ntAPPRIS P1 BASIC9.3□□□□□ -0.92
Trim35Q8C006 Gm10260-201ENSMUST00000074072 561 ntAPPRIS P1 BASIC9.3□□□□□ -0.92
Trim35Q8C006 Rpl31-ps20-201ENSMUST00000080982 378 ntBASIC9.3□□□□□ -0.92
Trim35Q8C006 C2-205ENSMUST00000148431 1946 ntTSL 5 BASIC9.3□□□□□ -0.92
Trim35Q8C006 Agxt2-201ENSMUST00000022858 1825 ntTSL 2 BASIC9.3□□□□□ -0.92
Trim35Q8C006 Gp1ba-202ENSMUST00000108551 2480 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trim35Q8C006 Def8-202ENSMUST00000065534 3127 ntAPPRIS P3 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trim35Q8C006 AC122357.3-201ENSMUST00000221260 2293 ntBASIC9.3□□□□□ -0.92
Trim35Q8C006 Gabpb2-203ENSMUST00000107204 1539 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Trim35Q8C006 Phactr1-214ENSMUST00000149235 2076 ntAPPRIS P1 TSL 5 BASIC9.3□□□□□ -0.92
Trim35Q8C006 Smcr8-202ENSMUST00000102667 3544 ntBASIC9.3□□□□□ -0.92
Trim35Q8C006 Gm7435-202ENSMUST00000216003 2424 ntBASIC9.3□□□□□ -0.92
Trim35Q8C006 Tollip-203ENSMUST00000130439 1892 ntTSL 5 BASIC9.3□□□□□ -0.92
Trim35Q8C006 Gm8314-201ENSMUST00000208964 1858 ntBASIC9.3□□□□□ -0.92
Trim35Q8C006 Arhgap19-202ENSMUST00000163265 5058 ntTSL 5 BASIC9.3□□□□□ -0.92
Trim35Q8C006 Gm15495-201ENSMUST00000117570 1312 ntBASIC9.3□□□□□ -0.92
Trim35Q8C006 Gm5346-201ENSMUST00000056023 2326 ntAPPRIS P1 BASIC9.3□□□□□ -0.92
Trim35Q8C006 Aasdh-202ENSMUST00000120963 3694 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trim35Q8C006 Gm4798-201ENSMUST00000218024 1699 ntBASIC9.29□□□□□ -0.92
Trim35Q8C006 4930533I22Rik-201ENSMUST00000176290 2564 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Trim35Q8C006 Cdh16-213ENSMUST00000212882 2923 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trim35Q8C006 Stambp-201ENSMUST00000068054 2364 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Trim35Q8C006 D830005E20Rik-201ENSMUST00000217716 1844 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Trim35Q8C006 Gm28226-201ENSMUST00000186916 2169 ntTSL 5 BASIC9.29□□□□□ -0.92
Trim35Q8C006 Gm28250-201ENSMUST00000187025 2168 ntTSL 5 BASIC9.29□□□□□ -0.92
Trim35Q8C006 Gm28945-201ENSMUST00000187780 2165 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Trim35Q8C006 Gm28898-201ENSMUST00000189604 2167 ntTSL 5 BASIC9.29□□□□□ -0.92
Trim35Q8C006 Gm29622-201ENSMUST00000190914 2165 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Trim35Q8C006 Gm37157-201ENSMUST00000192120 2168 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Trim35Q8C006 Gm37547-201ENSMUST00000193277 2165 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Trim35Q8C006 Gm37112-201ENSMUST00000194389 2168 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Trim35Q8C006 Gm38136-201ENSMUST00000194775 2167 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Trim35Q8C006 Gm38296-201ENSMUST00000195205 2167 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Trim35Q8C006 Gm7690-201ENSMUST00000190885 1399 ntBASIC9.29□□□□□ -0.92
Trim35Q8C006 Olfr812-203ENSMUST00000205013 1718 ntAPPRIS P1 TSL 5 BASIC9.29□□□□□ -0.92
Trim35Q8C006 Sept2-215ENSMUST00000179353 3219 ntAPPRIS P1 TSL 5 BASIC9.29□□□□□ -0.92
Trim35Q8C006 Gm26018-201ENSMUST00000104406 128 ntBASIC9.29□□□□□ -0.92
Trim35Q8C006 Gm13623-201ENSMUST00000118359 625 ntBASIC9.29□□□□□ -0.92
Trim35Q8C006 Gm8661-201ENSMUST00000118688 992 ntBASIC9.29□□□□□ -0.92
Trim35Q8C006 Gm11693-201ENSMUST00000119625 565 ntBASIC9.29□□□□□ -0.92
Trim35Q8C006 Gm14792-201ENSMUST00000119725 258 ntBASIC9.29□□□□□ -0.92
Trim35Q8C006 Gm12518-201ENSMUST00000122075 779 ntBASIC9.29□□□□□ -0.92
Trim35Q8C006 1700025O08Rik-201ENSMUST00000123729 456 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Trim35Q8C006 Gm16145-201ENSMUST00000128807 583 ntTSL 2 BASIC9.29□□□□□ -0.92
Trim35Q8C006 Gm15892-203ENSMUST00000156149 1001 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Trim35Q8C006 9230117E06Rik-201ENSMUST00000159309 497 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Trim35Q8C006 Gm16537-201ENSMUST00000161529 702 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Trim35Q8C006 Gm25071-201ENSMUST00000175232 70 ntBASIC9.29□□□□□ -0.92
Trim35Q8C006 Pkib-211ENSMUST00000177473 525 ntAPPRIS P1 TSL 3 BASIC9.29□□□□□ -0.92
Trim35Q8C006 Gm9830-201ENSMUST00000178509 357 ntBASIC9.29□□□□□ -0.92
Trim35Q8C006 Gm4929-201ENSMUST00000182021 992 ntBASIC9.29□□□□□ -0.92
Trim35Q8C006 Platr10-201ENSMUST00000190602 1026 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Trim35Q8C006 Gm29388-201ENSMUST00000190718 284 ntTSL 3 BASIC9.29□□□□□ -0.92
Trim35Q8C006 D030025E07Rik-205ENSMUST00000198478 418 ntTSL 3 BASIC9.29□□□□□ -0.92
Trim35Q8C006 Trav15n-3-201ENSMUST00000200498 168 ntBASIC9.29□□□□□ -0.92
Trim35Q8C006 Gm9711-201ENSMUST00000208857 327 ntBASIC9.29□□□□□ -0.92
Trim35Q8C006 AC118476.1-201ENSMUST00000216237 349 ntTSL 3 BASIC9.29□□□□□ -0.92
Trim35Q8C006 Zkscan7-205ENSMUST00000216462 990 ntBASIC9.29□□□□□ -0.92
Trim35Q8C006 AC165164.1-202ENSMUST00000219324 649 ntTSL 3 BASIC9.29□□□□□ -0.92
Trim35Q8C006 4930442G10Rik-202ENSMUST00000221968 1096 ntTSL 5 BASIC9.29□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 126.5 ms