Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 AI662270-203ENSMUST00000145461 592 ntTSL 5 BASIC6.86□□□□□ -1.31
Upf3bQ3ULL6 Gm11697-201ENSMUST00000149226 525 ntTSL 2 BASIC6.86□□□□□ -1.31
Upf3bQ3ULL6 Gm12867-201ENSMUST00000151216 457 ntTSL 3 BASIC6.86□□□□□ -1.31
Upf3bQ3ULL6 Gm14507-201ENSMUST00000156169 347 ntTSL 2 BASIC6.86□□□□□ -1.31
Upf3bQ3ULL6 Serpina3d-ps-201ENSMUST00000163110 1272 ntBASIC6.86□□□□□ -1.31
Upf3bQ3ULL6 Gm9127-201ENSMUST00000188041 985 ntBASIC6.86□□□□□ -1.31
Upf3bQ3ULL6 Gm28455-201ENSMUST00000189105 1290 ntBASIC6.86□□□□□ -1.31
Upf3bQ3ULL6 Gm37103-201ENSMUST00000191830 115 ntBASIC6.86□□□□□ -1.31
Upf3bQ3ULL6 Gm44105-201ENSMUST00000204401 308 ntTSL 5 BASIC6.86□□□□□ -1.31
Upf3bQ3ULL6 Gm18600-201ENSMUST00000207205 505 ntBASIC6.86□□□□□ -1.31
Upf3bQ3ULL6 AC122305.2-201ENSMUST00000215148 834 ntBASIC6.86□□□□□ -1.31
Upf3bQ3ULL6 AV026068-218ENSMUST00000223980 575 ntBASIC6.86□□□□□ -1.31
Upf3bQ3ULL6 AC154431.2-201ENSMUST00000225215 1055 ntBASIC6.86□□□□□ -1.31
Upf3bQ3ULL6 AC105324.1-201ENSMUST00000227844 386 ntBASIC6.86□□□□□ -1.31
Upf3bQ3ULL6 AC116319.2-201ENSMUST00000228159 984 ntBASIC6.86□□□□□ -1.31
Upf3bQ3ULL6 Mir138-1-201ENSMUST00000083480 99 ntBASIC6.86□□□□□ -1.31
Upf3bQ3ULL6 Mrgprb5-201ENSMUST00000094389 1037 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
Upf3bQ3ULL6 Gm44039-201ENSMUST00000204192 2246 ntBASIC6.86□□□□□ -1.31
Upf3bQ3ULL6 Gm44046-201ENSMUST00000203145 2678 ntBASIC6.86□□□□□ -1.31
Upf3bQ3ULL6 B230303O12Rik-201ENSMUST00000199119 3645 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Upf3bQ3ULL6 Ccr9-201ENSMUST00000111454 2620 ntTSL 5 BASIC6.86□□□□□ -1.31
Upf3bQ3ULL6 Errfi1-202ENSMUST00000073600 3036 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Upf3bQ3ULL6 Gm16523-202ENSMUST00000203640 4750 ntBASIC6.86□□□□□ -1.31
Upf3bQ3ULL6 Olfr904-202ENSMUST00000216724 5197 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
Upf3bQ3ULL6 AC154576.1-202ENSMUST00000223966 3320 ntBASIC6.86□□□□□ -1.31
Upf3bQ3ULL6 Cenpf-204ENSMUST00000171929 11130 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
Upf3bQ3ULL6 CT010577.1-202ENSMUST00000226187 1903 ntBASIC6.86□□□□□ -1.31
Upf3bQ3ULL6 Gla-201ENSMUST00000033621 3172 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Upf3bQ3ULL6 Gm29274-202ENSMUST00000188814 1498 ntTSL 5 BASIC6.85□□□□□ -1.31
Upf3bQ3ULL6 Gm28472-202ENSMUST00000190133 1499 ntTSL 5 BASIC6.85□□□□□ -1.31
Upf3bQ3ULL6 Gm28789-202ENSMUST00000190429 1499 ntTSL 5 BASIC6.85□□□□□ -1.31
Upf3bQ3ULL6 4732465J04Rik-202ENSMUST00000187483 2744 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Upf3bQ3ULL6 Dock7-202ENSMUST00000075836 6704 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
Upf3bQ3ULL6 Lrrc3b-202ENSMUST00000163937 1424 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Upf3bQ3ULL6 Zfa-ps-201ENSMUST00000180526 2231 ntBASIC6.85□□□□□ -1.31
Upf3bQ3ULL6 Zfp184-201ENSMUST00000006903 2214 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
Upf3bQ3ULL6 Sugt1-201ENSMUST00000054908 7392 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Upf3bQ3ULL6 Hormad1-201ENSMUST00000029754 1385 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
Upf3bQ3ULL6 Scaper-204ENSMUST00000216595 2911 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Upf3bQ3ULL6 AC122263.1-201ENSMUST00000228636 2805 ntBASIC6.85□□□□□ -1.31
Upf3bQ3ULL6 Mgat4a-206ENSMUST00000154819 2796 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Upf3bQ3ULL6 Uevld-201ENSMUST00000094398 4616 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Upf3bQ3ULL6 Gm24989-201ENSMUST00000104461 88 ntBASIC6.85□□□□□ -1.31
Upf3bQ3ULL6 Insl5-202ENSMUST00000106869 438 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
Upf3bQ3ULL6 Gm11472-201ENSMUST00000121305 556 ntBASIC6.85□□□□□ -1.31
Upf3bQ3ULL6 Mir3471-2-201ENSMUST00000174896 102 ntBASIC6.85□□□□□ -1.31
Upf3bQ3ULL6 Gm5225-201ENSMUST00000178572 324 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
Upf3bQ3ULL6 Gm29206-201ENSMUST00000189321 827 ntTSL 5 BASIC6.85□□□□□ -1.31
Upf3bQ3ULL6 Gm43243-201ENSMUST00000199964 278 ntBASIC6.85□□□□□ -1.31
Upf3bQ3ULL6 Klk1b10-ps-201ENSMUST00000205895 783 ntBASIC6.85□□□□□ -1.31
Upf3bQ3ULL6 Gm44861-201ENSMUST00000208325 1220 ntBASIC6.85□□□□□ -1.31
Upf3bQ3ULL6 Gm44787-202ENSMUST00000208339 1069 ntTSL 5 BASIC6.85□□□□□ -1.31
Upf3bQ3ULL6 Gm45064-201ENSMUST00000208619 443 ntTSL 5 BASIC6.85□□□□□ -1.31
Upf3bQ3ULL6 Gm10037-203ENSMUST00000221620 636 ntAPPRIS P5 TSL 3 BASIC6.85□□□□□ -1.31
Upf3bQ3ULL6 AC156576.3-201ENSMUST00000221940 452 ntTSL 5 BASIC6.85□□□□□ -1.31
Upf3bQ3ULL6 AC133598.3-204ENSMUST00000224260 767 ntBASIC6.85□□□□□ -1.31
Upf3bQ3ULL6 4930555F03Rik-201ENSMUST00000033963 717 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Upf3bQ3ULL6 Sult2a3-201ENSMUST00000098809 1018 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
Upf3bQ3ULL6 Htr2a-201ENSMUST00000036653 5606 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Upf3bQ3ULL6 Nlrp10-201ENSMUST00000055745 4504 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Upf3bQ3ULL6 Atp10b-201ENSMUST00000077659 6825 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
Upf3bQ3ULL6 Lncenc1-202ENSMUST00000179324 2764 ntTSL 2 BASIC6.85□□□□□ -1.31
Upf3bQ3ULL6 Gm37234-201ENSMUST00000193259 1441 ntBASIC6.84□□□□□ -1.31
Upf3bQ3ULL6 Ggta1-203ENSMUST00000102794 3606 ntAPPRIS P3 TSL 1 (best) BASIC6.84□□□□□ -1.31
Upf3bQ3ULL6 Ino80d-201ENSMUST00000097718 13675 ntTSL 5 BASIC6.84□□□□□ -1.31
Upf3bQ3ULL6 Ms4a4c-201ENSMUST00000072729 1723 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Upf3bQ3ULL6 Clock-205ENSMUST00000202651 9744 ntAPPRIS P3 TSL 2 BASIC6.84□□□□□ -1.31
Upf3bQ3ULL6 Gm42544-201ENSMUST00000197868 3242 ntBASIC6.84□□□□□ -1.31
Upf3bQ3ULL6 4930431P03Rik-204ENSMUST00000228169 1967 ntBASIC6.84□□□□□ -1.31
Upf3bQ3ULL6 Alkbh8-202ENSMUST00000165105 2256 ntAPPRIS P2 TSL 5 BASIC6.84□□□□□ -1.31
Upf3bQ3ULL6 Rbms3-205ENSMUST00000111772 2234 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
Upf3bQ3ULL6 Gdpd4-202ENSMUST00000170049 1899 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
Upf3bQ3ULL6 Gm11799-201ENSMUST00000116110 460 ntBASIC6.84□□□□□ -1.31
Upf3bQ3ULL6 Gm15164-201ENSMUST00000122203 271 ntBASIC6.84□□□□□ -1.31
Upf3bQ3ULL6 Gm12506-201ENSMUST00000123620 806 ntTSL 5 BASIC6.84□□□□□ -1.31
Upf3bQ3ULL6 Mir1953-201ENSMUST00000157866 89 ntBASIC6.84□□□□□ -1.31
Upf3bQ3ULL6 Gm16226-201ENSMUST00000159950 760 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Upf3bQ3ULL6 Gm16231-201ENSMUST00000160432 319 ntTSL 3 BASIC6.84□□□□□ -1.31
Upf3bQ3ULL6 AA465934-205ENSMUST00000177533 308 ntTSL 2 BASIC6.84□□□□□ -1.31
Upf3bQ3ULL6 Gm4904-201ENSMUST00000178243 1195 ntBASIC6.84□□□□□ -1.31
Upf3bQ3ULL6 Gm26851-201ENSMUST00000181867 918 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Upf3bQ3ULL6 Gm27167-201ENSMUST00000183752 511 ntTSL 3 BASIC6.84□□□□□ -1.31
Upf3bQ3ULL6 1810012K16Rik-201ENSMUST00000190830 547 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Upf3bQ3ULL6 Trav13n-1-201ENSMUST00000198359 331 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
Upf3bQ3ULL6 Gm7554-201ENSMUST00000202282 574 ntBASIC6.84□□□□□ -1.31
Upf3bQ3ULL6 Olfr1509-203ENSMUST00000206100 1161 ntAPPRIS P1 TSL 3 BASIC6.84□□□□□ -1.31
Upf3bQ3ULL6 5430437J10Rik-201ENSMUST00000211750 1234 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Upf3bQ3ULL6 4930486F22Rik-201ENSMUST00000218077 559 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Upf3bQ3ULL6 AC123043.1-201ENSMUST00000221068 645 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Upf3bQ3ULL6 Gm9321-201ENSMUST00000221179 778 ntBASIC6.84□□□□□ -1.31
Upf3bQ3ULL6 AC135086.1-201ENSMUST00000228621 817 ntBASIC6.84□□□□□ -1.31
Upf3bQ3ULL6 Cypt1-201ENSMUST00000024026 672 ntAPPRIS P3 TSL 1 (best) BASIC6.84□□□□□ -1.31
Upf3bQ3ULL6 Calcoco2-202ENSMUST00000097162 968 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.31
Upf3bQ3ULL6 Angptl1-201ENSMUST00000027885 2651 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Upf3bQ3ULL6 Tlr11-202ENSMUST00000185091 3207 ntAPPRIS P2 TSL 2 BASIC6.84□□□□□ -1.31
Upf3bQ3ULL6 Zfp317-203ENSMUST00000213725 2354 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Upf3bQ3ULL6 Olfr691-202ENSMUST00000213290 2327 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
Upf3bQ3ULL6 Vps50-203ENSMUST00000170873 3687 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Upf3bQ3ULL6 Gm37913-201ENSMUST00000192925 2544 ntBASIC6.84□□□□□ -1.31
Upf3bQ3ULL6 Rbmy-201ENSMUST00000100360 1708 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Retrieved 100 of 76,532 protein–RNA pairs in 61.9 ms