Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Gm29312-201ENSMUST00000188724 696 ntBASIC7.46□□□□□ -1.22
Sox1P53783 Gm29451-201ENSMUST00000188862 696 ntBASIC7.46□□□□□ -1.22
Sox1P53783 Gm29637-201ENSMUST00000188877 696 ntBASIC7.46□□□□□ -1.22
Sox1P53783 Gm29033-201ENSMUST00000189114 696 ntBASIC7.46□□□□□ -1.22
Sox1P53783 Gm29614-201ENSMUST00000189263 694 ntBASIC7.46□□□□□ -1.22
Sox1P53783 Gm28751-201ENSMUST00000189287 696 ntBASIC7.46□□□□□ -1.22
Sox1P53783 Gm29559-201ENSMUST00000189412 696 ntBASIC7.46□□□□□ -1.22
Sox1P53783 Gm28272-201ENSMUST00000189512 696 ntBASIC7.46□□□□□ -1.22
Sox1P53783 Gm28483-201ENSMUST00000189519 696 ntBASIC7.46□□□□□ -1.22
Sox1P53783 Gm28123-201ENSMUST00000189725 696 ntBASIC7.46□□□□□ -1.22
Sox1P53783 Gm28368-201ENSMUST00000189804 696 ntBASIC7.46□□□□□ -1.22
Sox1P53783 Gm29119-201ENSMUST00000189973 696 ntBASIC7.46□□□□□ -1.22
Sox1P53783 Gm28716-201ENSMUST00000190217 696 ntBASIC7.46□□□□□ -1.22
Sox1P53783 Gm29239-201ENSMUST00000190304 696 ntBASIC7.46□□□□□ -1.22
Sox1P53783 4930548G14Rik-202ENSMUST00000190364 1185 ntTSL 2 BASIC7.46□□□□□ -1.22
Sox1P53783 Gm28837-201ENSMUST00000190397 696 ntBASIC7.46□□□□□ -1.22
Sox1P53783 Gm28531-201ENSMUST00000190529 696 ntBASIC7.46□□□□□ -1.22
Sox1P53783 Gm28165-201ENSMUST00000190669 694 ntBASIC7.46□□□□□ -1.22
Sox1P53783 Gm29181-201ENSMUST00000191288 696 ntBASIC7.46□□□□□ -1.22
Sox1P53783 4930403P22Rik-201ENSMUST00000192234 713 ntBASIC7.46□□□□□ -1.22
Sox1P53783 Gm32347-201ENSMUST00000192944 696 ntBASIC7.46□□□□□ -1.22
Sox1P53783 Gm37637-201ENSMUST00000195540 1256 ntBASIC7.46□□□□□ -1.22
Sox1P53783 Gm5694-201ENSMUST00000195648 641 ntBASIC7.46□□□□□ -1.22
Sox1P53783 Gm37990-201ENSMUST00000195821 696 ntBASIC7.46□□□□□ -1.22
Sox1P53783 Csn1s2a-209ENSMUST00000200322 797 ntAPPRIS ALT2 TSL 2 BASIC7.46□□□□□ -1.22
Sox1P53783 Traf1-209ENSMUST00000201690 386 ntTSL 3 BASIC7.46□□□□□ -1.22
Sox1P53783 Gm43459-201ENSMUST00000202093 331 ntBASIC7.46□□□□□ -1.22
Sox1P53783 Speer9-ps1-201ENSMUST00000203447 775 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
Sox1P53783 Olfr396-ps1-202ENSMUST00000205791 633 ntBASIC7.46□□□□□ -1.22
Sox1P53783 Gm45514-201ENSMUST00000211531 689 ntBASIC7.46□□□□□ -1.22
Sox1P53783 Ctla2b-201ENSMUST00000021884 842 ntAPPRIS P4 TSL 1 (best) BASIC7.46□□□□□ -1.22
Sox1P53783 CT030657.2-201ENSMUST00000220710 792 ntTSL 5 BASIC7.46□□□□□ -1.22
Sox1P53783 Gnrh1-202ENSMUST00000223929 428 ntBASIC7.46□□□□□ -1.22
Sox1P53783 AC174797.2-203ENSMUST00000224017 716 ntBASIC7.46□□□□□ -1.22
Sox1P53783 AC154724.1-201ENSMUST00000225782 821 ntBASIC7.46□□□□□ -1.22
Sox1P53783 AC124395.1-201ENSMUST00000225940 707 ntBASIC7.46□□□□□ -1.22
Sox1P53783 E330017A01Rik-201ENSMUST00000053249 1108 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
Sox1P53783 BC048671-201ENSMUST00000054799 1212 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
Sox1P53783 Olfr836-201ENSMUST00000074986 955 ntAPPRIS P2 BASIC7.46□□□□□ -1.22
Sox1P53783 Gm24451-201ENSMUST00000083353 133 ntBASIC7.46□□□□□ -1.22
Sox1P53783 Rpl21-ps5-201ENSMUST00000095940 483 ntBASIC7.46□□□□□ -1.22
Sox1P53783 Gm16294-201ENSMUST00000070382 1459 ntTSL 2 BASIC7.46□□□□□ -1.22
Sox1P53783 Galnt13-201ENSMUST00000068595 1671 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
Sox1P53783 Gm46123-201ENSMUST00000217447 6424 ntTSL 5 BASIC7.46□□□□□ -1.22
Sox1P53783 Copg1-202ENSMUST00000113607 4140 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
Sox1P53783 Olfr376-202ENSMUST00000120401 3342 ntAPPRIS P3 TSL 2 BASIC7.46□□□□□ -1.22
Sox1P53783 Il5ra-201ENSMUST00000167925 1704 ntAPPRIS P1 TSL 5 BASIC7.46□□□□□ -1.22
Sox1P53783 Gm16427-202ENSMUST00000200745 1749 ntAPPRIS P5 TSL 2 BASIC7.46□□□□□ -1.22
Sox1P53783 Abcb11-204ENSMUST00000180142 4963 ntAPPRIS ALT2 TSL 5 BASIC7.46□□□□□ -1.22
Sox1P53783 Gm38276-201ENSMUST00000192446 1343 ntBASIC7.46□□□□□ -1.22
Sox1P53783 Gucy2c-201ENSMUST00000032338 3959 ntAPPRIS ALT2 TSL 1 (best) BASIC7.46□□□□□ -1.22
Sox1P53783 Gm42811-201ENSMUST00000201951 2768 ntBASIC7.46□□□□□ -1.22
Sox1P53783 Fbxw14-203ENSMUST00000198844 1786 ntAPPRIS P3 TSL 1 (best) BASIC7.46□□□□□ -1.22
Sox1P53783 Cyp2c29-201ENSMUST00000003137 1783 ntAPPRIS P2 TSL 1 (best) BASIC7.46□□□□□ -1.22
Sox1P53783 Myof-211ENSMUST00000226068 6633 ntAPPRIS ALT2 BASIC7.46□□□□□ -1.22
Sox1P53783 Sox2ot-215ENSMUST00000199171 3486 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
Sox1P53783 Gm38277-201ENSMUST00000195172 1367 ntBASIC7.46□□□□□ -1.22
Sox1P53783 Ccdc14-201ENSMUST00000023532 4107 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
Sox1P53783 Creb1-201ENSMUST00000049932 5009 ntTSL 5 BASIC7.45□□□□□ -1.22
Sox1P53783 6430562O15Rik-202ENSMUST00000180808 3997 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Sox1P53783 Fam102b-201ENSMUST00000046924 5368 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Sox1P53783 Mrpl48-201ENSMUST00000064334 1865 ntBASIC7.45□□□□□ -1.22
Sox1P53783 Adhfe1-203ENSMUST00000144177 3239 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Sox1P53783 Psma8-201ENSMUST00000040860 1693 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Sox1P53783 Asb17-201ENSMUST00000044089 2553 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Sox1P53783 Lig3-201ENSMUST00000021039 5957 ntAPPRIS ALT2 TSL 5 BASIC7.45□□□□□ -1.22
Sox1P53783 Nol12-203ENSMUST00000138880 3717 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Sox1P53783 Kcnj15-203ENSMUST00000113855 5128 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Sox1P53783 9430034N14Rik-201ENSMUST00000193532 3785 ntBASIC7.45□□□□□ -1.22
Sox1P53783 Cbx3-204ENSMUST00000114446 1719 ntAPPRIS P1 TSL 5 BASIC7.45□□□□□ -1.22
Sox1P53783 Gm31805-201ENSMUST00000211921 4031 ntTSL 3 BASIC7.45□□□□□ -1.22
Sox1P53783 AC154681.1-201ENSMUST00000225876 1735 ntBASIC7.45□□□□□ -1.22
Sox1P53783 AC122769.1-201ENSMUST00000226930 1714 ntBASIC7.45□□□□□ -1.22
Sox1P53783 Sult2a1-201ENSMUST00000108522 1020 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Sox1P53783 Gm7173-202ENSMUST00000114021 1083 ntAPPRIS ALT2 TSL 5 BASIC7.45□□□□□ -1.22
Sox1P53783 Gm9427-201ENSMUST00000116187 651 ntBASIC7.45□□□□□ -1.22
Sox1P53783 Spin2-ps1-201ENSMUST00000116643 875 ntBASIC7.45□□□□□ -1.22
Sox1P53783 Gm13141-201ENSMUST00000117417 456 ntBASIC7.45□□□□□ -1.22
Sox1P53783 Gm15971-201ENSMUST00000119372 211 ntBASIC7.45□□□□□ -1.22
Sox1P53783 Rpl5-ps1-201ENSMUST00000121367 894 ntBASIC7.45□□□□□ -1.22
Sox1P53783 Gm3757-201ENSMUST00000125878 675 ntBASIC7.45□□□□□ -1.22
Sox1P53783 Bloodlinc-201ENSMUST00000126237 679 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Sox1P53783 1700042G15Rik-203ENSMUST00000152001 583 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Sox1P53783 Gm16231-201ENSMUST00000160432 319 ntTSL 3 BASIC7.45□□□□□ -1.22
Sox1P53783 Gm17078-201ENSMUST00000167617 668 ntAPPRIS P1 TSL 5 BASIC7.45□□□□□ -1.22
Sox1P53783 Obox3-204ENSMUST00000173912 1244 ntAPPRIS P1 TSL 5 BASIC7.45□□□□□ -1.22
Sox1P53783 Gm21909-201ENSMUST00000178260 439 ntBASIC7.45□□□□□ -1.22
Sox1P53783 Spin2-ps6-201ENSMUST00000178459 525 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
Sox1P53783 1810053B23Rik-201ENSMUST00000185242 634 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Sox1P53783 Gm28594-201ENSMUST00000187022 661 ntBASIC7.45□□□□□ -1.22
Sox1P53783 Gm28448-201ENSMUST00000188547 428 ntTSL 5 BASIC7.45□□□□□ -1.22
Sox1P53783 Gm29525-201ENSMUST00000189844 699 ntBASIC7.45□□□□□ -1.22
Sox1P53783 Gm29523-201ENSMUST00000191415 699 ntBASIC7.45□□□□□ -1.22
Sox1P53783 Gm6558-202ENSMUST00000192046 180 ntTSL 5 BASIC7.45□□□□□ -1.22
Sox1P53783 Gm36965-201ENSMUST00000193797 394 ntBASIC7.45□□□□□ -1.22
Sox1P53783 Gm42707-202ENSMUST00000196668 618 ntTSL 3 BASIC7.45□□□□□ -1.22
Sox1P53783 Gm42865-201ENSMUST00000197981 613 ntTSL 3 BASIC7.45□□□□□ -1.22
Sox1P53783 Gm43846-201ENSMUST00000200502 932 ntBASIC7.45□□□□□ -1.22
Sox1P53783 Gm43659-201ENSMUST00000200894 628 ntBASIC7.45□□□□□ -1.22
Sox1P53783 Gm7435-201ENSMUST00000214039 486 ntTSL 2 BASIC7.45□□□□□ -1.22
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms