Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Olfr1065-201ENSMUST00000213789 2154 ntAPPRIS P1 TSL 3 BASIC8.56□□□□□ -1.04
Col18a1P39061 Rbm12-202ENSMUST00000109604 6635 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Col18a1P39061 Gm44046-201ENSMUST00000203145 2678 ntBASIC8.56□□□□□ -1.04
Col18a1P39061 Elf1-204ENSMUST00000227192 3765 ntAPPRIS ALT2 BASIC8.56□□□□□ -1.04
Col18a1P39061 Smc2-201ENSMUST00000102915 5404 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Col18a1P39061 Slamf7-202ENSMUST00000192024 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
Col18a1P39061 Gm30075-201ENSMUST00000205509 3005 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Col18a1P39061 Slco5a1-207ENSMUST00000188454 8463 ntAPPRIS P2 TSL 5 BASIC8.56□□□□□ -1.04
Col18a1P39061 Cndp1-201ENSMUST00000070139 2818 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Col18a1P39061 Atxn7l1-208ENSMUST00000136644 3155 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Col18a1P39061 Cmtr2-201ENSMUST00000056972 3545 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Col18a1P39061 Sfmbt1-204ENSMUST00000227303 2960 ntBASIC8.56□□□□□ -1.04
Col18a1P39061 Gm32742-201ENSMUST00000210433 8516 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
Col18a1P39061 Rian-209ENSMUST00000182406 3476 ntBASIC8.56□□□□□ -1.04
Col18a1P39061 Sytl5-202ENSMUST00000086165 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
Col18a1P39061 Vmn1r37-202ENSMUST00000226311 1305 ntBASIC8.56□□□□□ -1.04
Col18a1P39061 Vmn1r37-203ENSMUST00000226886 1308 ntBASIC8.56□□□□□ -1.04
Col18a1P39061 Pira2-202ENSMUST00000119469 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
Col18a1P39061 Lhx4-201ENSMUST00000027740 5514 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Col18a1P39061 Cldn2-201ENSMUST00000054889 3044 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Col18a1P39061 Slc12a6-201ENSMUST00000028549 6105 ntAPPRIS P4 TSL 1 (best) BASIC8.56□□□□□ -1.04
Col18a1P39061 Gm14444-202ENSMUST00000109070 1281 ntAPPRIS P1 TSL 3 BASIC8.56□□□□□ -1.04
Col18a1P39061 Gm12399-201ENSMUST00000121475 446 ntBASIC8.56□□□□□ -1.04
Col18a1P39061 Gm16135-201ENSMUST00000129470 568 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Col18a1P39061 Gm11466-201ENSMUST00000148017 291 ntTSL 3 BASIC8.56□□□□□ -1.04
Col18a1P39061 Gm3307-201ENSMUST00000176164 632 ntBASIC8.56□□□□□ -1.04
Col18a1P39061 Gm45196-201ENSMUST00000206751 825 ntBASIC8.56□□□□□ -1.04
Col18a1P39061 Gm19900-201ENSMUST00000207285 576 ntBASIC8.56□□□□□ -1.04
Col18a1P39061 Gm44681-201ENSMUST00000208447 842 ntBASIC8.56□□□□□ -1.04
Col18a1P39061 AC156801.1-201ENSMUST00000216158 493 ntTSL 5 BASIC8.56□□□□□ -1.04
Col18a1P39061 Olfr694-201ENSMUST00000052535 1123 ntAPPRIS P1 TSL 3 BASIC8.56□□□□□ -1.04
Col18a1P39061 Tas2r104-201ENSMUST00000072404 909 ntAPPRIS P1 BASIC8.56□□□□□ -1.04
Col18a1P39061 Nme5-201ENSMUST00000079287 843 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Col18a1P39061 Olfr694-202ENSMUST00000082091 948 ntAPPRIS P1 BASIC8.56□□□□□ -1.04
Col18a1P39061 Rpl29-ps2-201ENSMUST00000086508 478 ntBASIC8.56□□□□□ -1.04
Col18a1P39061 Efl1-205ENSMUST00000179489 3608 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Col18a1P39061 Efl1-201ENSMUST00000039881 3610 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Col18a1P39061 Olfr947-ps1-202ENSMUST00000214936 2168 ntAPPRIS P1 TSL 2 BASIC8.55□□□□□ -1.04
Col18a1P39061 Cyp2j7-201ENSMUST00000162514 1515 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
Col18a1P39061 Ifi207-201ENSMUST00000042610 3422 ntAPPRIS P2 TSL 5 BASIC8.55□□□□□ -1.04
Col18a1P39061 Rassf6-201ENSMUST00000031317 1958 ntAPPRIS P3 TSL 5 BASIC8.55□□□□□ -1.04
Col18a1P39061 Olfr1410-202ENSMUST00000216553 5433 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
Col18a1P39061 Slx4ip-202ENSMUST00000099311 5089 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Col18a1P39061 Olfr202-203ENSMUST00000217485 1321 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
Col18a1P39061 Gm15462-201ENSMUST00000133653 4580 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Col18a1P39061 Pde10a-206ENSMUST00000115720 3328 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
Col18a1P39061 Ttll6-201ENSMUST00000107680 3485 ntAPPRIS ALT2 TSL 5 BASIC8.55□□□□□ -1.04
Col18a1P39061 Tmprss11f-201ENSMUST00000116553 3605 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Col18a1P39061 D030045P18Rik-203ENSMUST00000214947 1938 ntTSL 5 BASIC8.55□□□□□ -1.04
Col18a1P39061 Fmr1-206ENSMUST00000114657 4076 ntTSL 5 BASIC8.55□□□□□ -1.04
Col18a1P39061 Vps39-202ENSMUST00000102501 4384 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Col18a1P39061 Olfr557-202ENSMUST00000215423 2680 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
Col18a1P39061 Cep350-204ENSMUST00000138762 13307 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
Col18a1P39061 Slc5a9-203ENSMUST00000102721 4484 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Col18a1P39061 Ptchd4-201ENSMUST00000048691 6890 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
Col18a1P39061 Gm21637-201ENSMUST00000105124 778 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
Col18a1P39061 Gm12073-201ENSMUST00000117382 524 ntBASIC8.55□□□□□ -1.04
Col18a1P39061 Zswim9-202ENSMUST00000119139 3986 ntAPPRIS P5 TSL 1 (best) BASIC8.55□□□□□ -1.04
Col18a1P39061 Rpl23a-ps4-201ENSMUST00000121008 455 ntBASIC8.55□□□□□ -1.04
Col18a1P39061 Gm26023-201ENSMUST00000122722 313 ntBASIC8.55□□□□□ -1.04
Col18a1P39061 Pard3bos2-201ENSMUST00000127498 770 ntTSL 3 BASIC8.55□□□□□ -1.04
Col18a1P39061 Tnfsf13os-202ENSMUST00000144033 578 ntTSL 5 BASIC8.55□□□□□ -1.04
Col18a1P39061 Gm13179-202ENSMUST00000151994 978 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Col18a1P39061 Gm23149-201ENSMUST00000158837 230 ntBASIC8.55□□□□□ -1.04
Col18a1P39061 Sptssb-202ENSMUST00000171529 772 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Col18a1P39061 Gm27004-201ENSMUST00000183300 727 ntBASIC8.55□□□□□ -1.04
Col18a1P39061 Gm43554-201ENSMUST00000199987 186 ntBASIC8.55□□□□□ -1.04
Col18a1P39061 Gm2011-203ENSMUST00000203750 435 ntBASIC8.55□□□□□ -1.04
Col18a1P39061 Gm30694-201ENSMUST00000209278 1230 ntBASIC8.55□□□□□ -1.04
Col18a1P39061 AC124687.2-201ENSMUST00000221927 1228 ntTSL 5 BASIC8.55□□□□□ -1.04
Col18a1P39061 Tpbpa-202ENSMUST00000225275 642 ntAPPRIS ALT2 BASIC8.55□□□□□ -1.04
Col18a1P39061 CT030254.1-201ENSMUST00000225450 1078 ntBASIC8.55□□□□□ -1.04
Col18a1P39061 Pramel7-201ENSMUST00000026957 1861 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Col18a1P39061 Olfr309-201ENSMUST00000055690 927 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
Col18a1P39061 Zfp518b-201ENSMUST00000057258 6804 ntAPPRIS P1 TSL 3 BASIC8.55□□□□□ -1.04
Col18a1P39061 Sh3rf2-202ENSMUST00000074679 4444 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Col18a1P39061 Gm24200-201ENSMUST00000082955 157 ntBASIC8.55□□□□□ -1.04
Col18a1P39061 Phc1-208ENSMUST00000160696 4213 ntAPPRIS P3 TSL 1 (best) BASIC8.55□□□□□ -1.04
Col18a1P39061 Gm43534-201ENSMUST00000197685 2853 ntBASIC8.55□□□□□ -1.04
Col18a1P39061 Vmn2r118-201ENSMUST00000168440 2562 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
Col18a1P39061 Ctnnd1-206ENSMUST00000111675 5089 ntTSL 5 BASIC8.55□□□□□ -1.04
Col18a1P39061 CT030185.1-201ENSMUST00000222940 2289 ntBASIC8.55□□□□□ -1.04
Col18a1P39061 Scp2-ps2-203ENSMUST00000216438 1370 ntBASIC8.55□□□□□ -1.04
Col18a1P39061 Nmrk1-201ENSMUST00000042392 1357 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Col18a1P39061 Olfr366-202ENSMUST00000214897 5333 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
Col18a1P39061 Elmod2-201ENSMUST00000053902 4319 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Col18a1P39061 Arpp21-202ENSMUST00000070218 3181 ntTSL 5 BASIC8.54□□□□□ -1.04
Col18a1P39061 Fmn1-203ENSMUST00000102547 4967 ntAPPRIS P3 TSL 1 (best) BASIC8.54□□□□□ -1.04
Col18a1P39061 Ap1g1-201ENSMUST00000034171 3692 ntAPPRIS ALT1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Col18a1P39061 Gm3591-201ENSMUST00000164408 1745 ntAPPRIS P5 TSL 5 BASIC8.54□□□□□ -1.04
Col18a1P39061 Pknox2-207ENSMUST00000177218 3393 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Col18a1P39061 Olfr1080-201ENSMUST00000213185 1582 ntAPPRIS P1 TSL 2 BASIC8.54□□□□□ -1.04
Col18a1P39061 Gm37924-201ENSMUST00000195470 3647 ntBASIC8.54□□□□□ -1.04
Col18a1P39061 Slc38a9-201ENSMUST00000052514 8910 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Col18a1P39061 Ctnnd1-204ENSMUST00000099941 5783 ntTSL 5 BASIC8.54□□□□□ -1.04
Col18a1P39061 Birc2-204ENSMUST00000190341 3331 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
Col18a1P39061 Gm42881-201ENSMUST00000198636 3344 ntBASIC8.54□□□□□ -1.04
Col18a1P39061 4930594C11Rik-201ENSMUST00000192316 2755 ntBASIC8.54□□□□□ -1.04
Col18a1P39061 Gpr165-201ENSMUST00000033554 3170 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Col18a1P39061 Gm16440-201ENSMUST00000100900 1089 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
Retrieved 100 of 76,532 protein–RNA pairs in 70.3 ms