Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Rpl28-ps4-201ENSMUST00000170447 377 ntBASIC7.25□□□□□ -1.25
Col2a1P28481 Gm8297-201ENSMUST00000171636 997 ntAPPRIS ALT2 TSL 5 BASIC7.25□□□□□ -1.25
Col2a1P28481 Gm19560-201ENSMUST00000177510 514 ntBASIC7.25□□□□□ -1.25
Col2a1P28481 Gm5624-202ENSMUST00000178184 492 ntAPPRIS ALT2 TSL 5 BASIC7.25□□□□□ -1.25
Col2a1P28481 Gm2058-201ENSMUST00000178791 560 ntBASIC7.25□□□□□ -1.25
Col2a1P28481 Gm7952-201ENSMUST00000180540 984 ntBASIC7.25□□□□□ -1.25
Col2a1P28481 Mir6952-201ENSMUST00000185092 61 ntBASIC7.25□□□□□ -1.25
Col2a1P28481 Gm28237-201ENSMUST00000186563 641 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Col2a1P28481 Gm36939-201ENSMUST00000194889 439 ntBASIC7.25□□□□□ -1.25
Col2a1P28481 Gm44251-201ENSMUST00000204963 442 ntBASIC7.25□□□□□ -1.25
Col2a1P28481 Gm45798-201ENSMUST00000212370 511 ntTSL 5 BASIC7.25□□□□□ -1.25
Col2a1P28481 4933404K13Rik-201ENSMUST00000214651 937 ntTSL 3 BASIC7.25□□□□□ -1.25
Col2a1P28481 Gm18405-201ENSMUST00000220743 511 ntBASIC7.25□□□□□ -1.25
Col2a1P28481 Gstk1-201ENSMUST00000031897 930 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Col2a1P28481 Olfr516-201ENSMUST00000071410 945 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
Col2a1P28481 Ceacam13-201ENSMUST00000081703 946 ntAPPRIS P3 TSL 1 (best) BASIC7.25□□□□□ -1.25
Col2a1P28481 Psg16-202ENSMUST00000118367 2282 ntAPPRIS P3 TSL 1 (best) BASIC7.25□□□□□ -1.25
Col2a1P28481 Gm16503-201ENSMUST00000104964 3283 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
Col2a1P28481 Sh3d19-203ENSMUST00000182666 6886 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
Col2a1P28481 Gm10258-201ENSMUST00000091270 2123 ntBASIC7.25□□□□□ -1.25
Col2a1P28481 Cmtr2-201ENSMUST00000056972 3545 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Col2a1P28481 Vmn2r98-201ENSMUST00000170424 2574 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
Col2a1P28481 Yy2-201ENSMUST00000065806 2867 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
Col2a1P28481 Adarb2-201ENSMUST00000064473 6721 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Col2a1P28481 Tlr11-202ENSMUST00000185091 3207 ntAPPRIS P2 TSL 2 BASIC7.25□□□□□ -1.25
Col2a1P28481 Vmn1r54-202ENSMUST00000226921 3234 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
Col2a1P28481 Scn3b-203ENSMUST00000171835 4024 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Col2a1P28481 Nsrp1-201ENSMUST00000102494 3114 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Col2a1P28481 Slc5a7-201ENSMUST00000095712 5176 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Col2a1P28481 AC158596.1-201ENSMUST00000217315 2265 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Col2a1P28481 AC132596.1-201ENSMUST00000223043 2263 ntTSL 5 BASIC7.25□□□□□ -1.25
Col2a1P28481 Gm37086-201ENSMUST00000193082 3452 ntBASIC7.25□□□□□ -1.25
Col2a1P28481 Mgam-206ENSMUST00000202779 3821 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Col2a1P28481 Wdr44-201ENSMUST00000035766 4167 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Col2a1P28481 Fam90a1b-203ENSMUST00000113903 1760 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Col2a1P28481 Hormad1-201ENSMUST00000029754 1385 ntAPPRIS ALT2 TSL 1 (best) BASIC7.25□□□□□ -1.25
Col2a1P28481 Gm37420-201ENSMUST00000195332 2912 ntBASIC7.25□□□□□ -1.25
Col2a1P28481 Zc2hc1a-201ENSMUST00000051064 3292 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Col2a1P28481 Grip1-208ENSMUST00000138410 3532 ntAPPRIS P3 TSL 1 (best) BASIC7.24□□□□□ -1.25
Col2a1P28481 Gm25917-201ENSMUST00000104267 130 ntBASIC7.24□□□□□ -1.25
Col2a1P28481 Gm12040-201ENSMUST00000118357 537 ntBASIC7.24□□□□□ -1.25
Col2a1P28481 Gm13818-201ENSMUST00000119441 511 ntBASIC7.24□□□□□ -1.25
Col2a1P28481 Gm8317-201ENSMUST00000121261 471 ntBASIC7.24□□□□□ -1.25
Col2a1P28481 Gm27210-201ENSMUST00000184263 402 ntBASIC7.24□□□□□ -1.25
Col2a1P28481 Gm28179-202ENSMUST00000189029 327 ntTSL 5 BASIC7.24□□□□□ -1.25
Col2a1P28481 4933404I11Rik-201ENSMUST00000190294 1202 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Col2a1P28481 Gm28532-201ENSMUST00000190408 572 ntTSL 5 BASIC7.24□□□□□ -1.25
Col2a1P28481 Trav3n-2-201ENSMUST00000197693 334 ntBASIC7.24□□□□□ -1.25
Col2a1P28481 Gm43132-201ENSMUST00000199106 792 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Col2a1P28481 Gm42205-201ENSMUST00000199244 804 ntTSL 3 BASIC7.24□□□□□ -1.25
Col2a1P28481 Trav3d-2-201ENSMUST00000199874 334 ntBASIC7.24□□□□□ -1.25
Col2a1P28481 Gm44239-201ENSMUST00000204228 271 ntBASIC7.24□□□□□ -1.25
Col2a1P28481 Gm19653-201ENSMUST00000204326 1039 ntBASIC7.24□□□□□ -1.25
Col2a1P28481 Gm18863-201ENSMUST00000217004 1299 ntBASIC7.24□□□□□ -1.25
Col2a1P28481 AC079681.1-201ENSMUST00000219437 639 ntTSL 3 BASIC7.24□□□□□ -1.25
Col2a1P28481 Ctag2-201ENSMUST00000033524 854 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Col2a1P28481 Olfr250-201ENSMUST00000052085 996 ntAPPRIS P2 BASIC7.24□□□□□ -1.25
Col2a1P28481 Gm831-201ENSMUST00000149942 4517 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Col2a1P28481 Gm10447-201ENSMUST00000084653 2307 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
Col2a1P28481 Dgkb-203ENSMUST00000220990 4085 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Col2a1P28481 Sla-202ENSMUST00000164163 2952 ntAPPRIS P3 TSL 5 BASIC7.24□□□□□ -1.25
Col2a1P28481 Zrsr1-201ENSMUST00000049506 3282 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
Col2a1P28481 Tnik-211ENSMUST00000161964 3807 ntAPPRIS ALT2 TSL 5 BASIC7.24□□□□□ -1.25
Col2a1P28481 Ktn1-202ENSMUST00000185343 3846 ntAPPRIS ALT2 TSL 5 BASIC7.24□□□□□ -1.25
Col2a1P28481 Ktn1-205ENSMUST00000186627 3840 ntAPPRIS ALT2 TSL 5 BASIC7.24□□□□□ -1.25
Col2a1P28481 Ktn1-213ENSMUST00000188330 3819 ntAPPRIS ALT2 TSL 5 BASIC7.24□□□□□ -1.25
Col2a1P28481 Eps15-207ENSMUST00000175776 2802 ntAPPRIS ALT2 TSL 5 BASIC7.24□□□□□ -1.25
Col2a1P28481 Coro2a-201ENSMUST00000030021 4112 ntAPPRIS P3 TSL 1 (best) BASIC7.24□□□□□ -1.25
Col2a1P28481 Gm44436-201ENSMUST00000204200 1494 ntBASIC7.24□□□□□ -1.25
Col2a1P28481 Shprh-203ENSMUST00000159541 6679 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
Col2a1P28481 Cyp2c69-201ENSMUST00000168838 1770 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Col2a1P28481 Gm18313-201ENSMUST00000221036 1784 ntBASIC7.24□□□□□ -1.25
Col2a1P28481 Syn3-202ENSMUST00000121789 4006 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Col2a1P28481 AC121504.1-201ENSMUST00000221385 2705 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Col2a1P28481 Agl-203ENSMUST00000159742 4344 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Col2a1P28481 Vwa3a-201ENSMUST00000033180 4575 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
Col2a1P28481 Akap13-201ENSMUST00000166315 12543 ntAPPRIS P2 TSL 5 BASIC7.24□□□□□ -1.25
Col2a1P28481 Utp14b-201ENSMUST00000053760 7393 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Col2a1P28481 Zdhhc9-202ENSMUST00000088935 2815 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Col2a1P28481 Gm9519-201ENSMUST00000206108 1337 ntBASIC7.24□□□□□ -1.25
Col2a1P28481 BC055402-201ENSMUST00000190488 3301 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Col2a1P28481 4931406P16Rik-210ENSMUST00000206399 4158 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Col2a1P28481 AC153152.1-201ENSMUST00000221105 2742 ntBASIC7.24□□□□□ -1.25
Col2a1P28481 Kif24-202ENSMUST00000108055 5593 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Col2a1P28481 Gm14755-201ENSMUST00000118037 384 ntBASIC7.24□□□□□ -1.25
Col2a1P28481 Chchd7-204ENSMUST00000119403 695 ntAPPRIS P1 TSL 2 BASIC7.24□□□□□ -1.25
Col2a1P28481 Atp6v1c2-207ENSMUST00000156727 1279 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Col2a1P28481 Gm5218-201ENSMUST00000172270 465 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
Col2a1P28481 Obox6-ps1-201ENSMUST00000176658 1042 ntBASIC7.24□□□□□ -1.25
Col2a1P28481 9530026P05Rik-202ENSMUST00000181145 2968 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
Col2a1P28481 Igkv19-93-201ENSMUST00000183936 344 ntAPPRIS ALT2 BASIC7.24□□□□□ -1.25
Col2a1P28481 Gm28358-201ENSMUST00000187860 636 ntTSL 5 BASIC7.24□□□□□ -1.25
Col2a1P28481 Gm37511-201ENSMUST00000192901 294 ntBASIC7.24□□□□□ -1.25
Col2a1P28481 Gm35013-201ENSMUST00000197218 832 ntBASIC7.24□□□□□ -1.25
Col2a1P28481 Specc1-217ENSMUST00000202905 3841 ntAPPRIS ALT2 TSL 5 BASIC7.24□□□□□ -1.25
Col2a1P28481 Gm44837-201ENSMUST00000206863 717 ntBASIC7.24□□□□□ -1.25
Col2a1P28481 Gm45646-201ENSMUST00000210983 441 ntTSL 5 BASIC7.24□□□□□ -1.25
Col2a1P28481 AC165256.1-201ENSMUST00000216687 670 ntTSL 2 BASIC7.24□□□□□ -1.25
Col2a1P28481 Gm33037-201ENSMUST00000217927 642 ntTSL 3 BASIC7.24□□□□□ -1.25
Col2a1P28481 AC154527.1-201ENSMUST00000225809 242 ntBASIC7.24□□□□□ -1.25
Retrieved 100 of 76,532 protein–RNA pairs in 67.7 ms