Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Gm21821-202ENSMUST00000187288 175 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Col6a3E9PWQ3 Gm28886-201ENSMUST00000187350 174 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Col6a3E9PWQ3 Gm21599-202ENSMUST00000187381 174 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Col6a3E9PWQ3 Gm28128-201ENSMUST00000187403 174 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Col6a3E9PWQ3 Gm21450-201ENSMUST00000187408 174 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Col6a3E9PWQ3 Gm28194-201ENSMUST00000187412 484 ntBASIC6.16□□□□□ -1.42
Col6a3E9PWQ3 Gm28689-201ENSMUST00000187441 174 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Col6a3E9PWQ3 Gm28851-201ENSMUST00000187800 174 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Col6a3E9PWQ3 Gm28886-202ENSMUST00000187889 484 ntBASIC6.16□□□□□ -1.42
Col6a3E9PWQ3 Gm28554-201ENSMUST00000187964 174 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Col6a3E9PWQ3 Gm28984-201ENSMUST00000188202 174 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Col6a3E9PWQ3 Gm21529-202ENSMUST00000188473 174 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Col6a3E9PWQ3 Gm28604-202ENSMUST00000188638 174 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Col6a3E9PWQ3 Gm21588-202ENSMUST00000188721 174 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Col6a3E9PWQ3 Gm21539-202ENSMUST00000188764 174 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Col6a3E9PWQ3 Gm28216-201ENSMUST00000188785 174 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Col6a3E9PWQ3 Gm29645-201ENSMUST00000189117 174 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Col6a3E9PWQ3 Gm28554-202ENSMUST00000189175 484 ntBASIC6.16□□□□□ -1.42
Col6a3E9PWQ3 Gm21413-201ENSMUST00000189224 174 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Col6a3E9PWQ3 Gm21723-202ENSMUST00000189444 174 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Col6a3E9PWQ3 Gm36782-201ENSMUST00000189459 174 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Col6a3E9PWQ3 Gm21419-201ENSMUST00000189495 173 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Col6a3E9PWQ3 Gm28566-202ENSMUST00000189532 174 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Col6a3E9PWQ3 Gm29213-202ENSMUST00000189703 484 ntBASIC6.16□□□□□ -1.42
Col6a3E9PWQ3 Gm21626-202ENSMUST00000189751 174 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Col6a3E9PWQ3 Gm28851-202ENSMUST00000189757 484 ntBASIC6.16□□□□□ -1.42
Col6a3E9PWQ3 Gm28656-201ENSMUST00000190017 174 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Col6a3E9PWQ3 Gm28461-201ENSMUST00000190023 484 ntBASIC6.16□□□□□ -1.42
Col6a3E9PWQ3 Gm21562-202ENSMUST00000190314 174 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Col6a3E9PWQ3 Gm28517-201ENSMUST00000190343 174 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Col6a3E9PWQ3 Gm29531-201ENSMUST00000190569 174 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Col6a3E9PWQ3 Gm21914-202ENSMUST00000190577 174 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Col6a3E9PWQ3 Gm20978-201ENSMUST00000190688 174 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Col6a3E9PWQ3 Gm20963-201ENSMUST00000190880 174 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Col6a3E9PWQ3 Gm29316-201ENSMUST00000190953 174 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Col6a3E9PWQ3 Gm29351-201ENSMUST00000191052 174 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Col6a3E9PWQ3 Gm29466-201ENSMUST00000191077 174 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Col6a3E9PWQ3 Gm20987-201ENSMUST00000191165 174 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Col6a3E9PWQ3 Gm28194-202ENSMUST00000191217 174 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Col6a3E9PWQ3 Gm28461-202ENSMUST00000191406 174 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Col6a3E9PWQ3 Gm37927-201ENSMUST00000192238 174 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Col6a3E9PWQ3 Gm37544-201ENSMUST00000192803 174 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Col6a3E9PWQ3 Gm37635-201ENSMUST00000193129 174 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Col6a3E9PWQ3 Gm21809-202ENSMUST00000194072 174 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Col6a3E9PWQ3 Gm10709-201ENSMUST00000213318 480 ntBASIC6.16□□□□□ -1.42
Col6a3E9PWQ3 Olfr956-ps1-201ENSMUST00000216492 867 ntBASIC6.16□□□□□ -1.42
Col6a3E9PWQ3 Vmn1r41-202ENSMUST00000226337 888 ntBASIC6.16□□□□□ -1.42
Col6a3E9PWQ3 Vmn1r41-203ENSMUST00000226562 1046 ntBASIC6.16□□□□□ -1.42
Col6a3E9PWQ3 Gm23737-201ENSMUST00000082547 159 ntBASIC6.16□□□□□ -1.42
Col6a3E9PWQ3 Gm38077-201ENSMUST00000193657 3245 ntBASIC6.16□□□□□ -1.42
Col6a3E9PWQ3 Hivep3-209ENSMUST00000166542 7253 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Col6a3E9PWQ3 Lss-201ENSMUST00000048678 4667 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Col6a3E9PWQ3 Olfr1-201ENSMUST00000120303 3433 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Col6a3E9PWQ3 Gimap4-201ENSMUST00000067506 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
Col6a3E9PWQ3 Zfp607a-202ENSMUST00000205534 3511 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Col6a3E9PWQ3 Col6a4-201ENSMUST00000121963 7371 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Col6a3E9PWQ3 4921528I07Rik-202ENSMUST00000213446 3798 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Col6a3E9PWQ3 Elf1-204ENSMUST00000227192 3765 ntAPPRIS ALT2 BASIC6.16□□□□□ -1.42
Col6a3E9PWQ3 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
Col6a3E9PWQ3 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
Col6a3E9PWQ3 Plag1-201ENSMUST00000003369 4774 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Col6a3E9PWQ3 Catsperg1-201ENSMUST00000047846 3566 ntTSL 5 BASIC6.16□□□□□ -1.42
Col6a3E9PWQ3 Kif9-202ENSMUST00000084952 2713 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Col6a3E9PWQ3 Gnb1-208ENSMUST00000176637 2832 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Col6a3E9PWQ3 Ddx58-201ENSMUST00000037907 3874 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Col6a3E9PWQ3 Gm37142-201ENSMUST00000193718 3110 ntBASIC6.16□□□□□ -1.42
Col6a3E9PWQ3 Gm42427-201ENSMUST00000200473 5292 ntBASIC6.16□□□□□ -1.42
Col6a3E9PWQ3 Casr-202ENSMUST00000114847 4303 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Col6a3E9PWQ3 Cad-211ENSMUST00000202795 6559 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Col6a3E9PWQ3 Zbtb18-201ENSMUST00000077225 4944 ntAPPRIS P3 BASIC6.16□□□□□ -1.42
Col6a3E9PWQ3 Sh2d1b2-202ENSMUST00000162752 2542 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Col6a3E9PWQ3 Gm14745-201ENSMUST00000118480 1096 ntBASIC6.16□□□□□ -1.42
Col6a3E9PWQ3 Gm22867-201ENSMUST00000157499 109 ntBASIC6.16□□□□□ -1.42
Col6a3E9PWQ3 1700031A10Rik-201ENSMUST00000174380 656 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Col6a3E9PWQ3 Gm29345-201ENSMUST00000189213 399 ntTSL 3 BASIC6.16□□□□□ -1.42
Col6a3E9PWQ3 Gm45209-201ENSMUST00000207122 353 ntBASIC6.16□□□□□ -1.42
Col6a3E9PWQ3 Gm36372-201ENSMUST00000221011 778 ntTSL 5 BASIC6.16□□□□□ -1.42
Col6a3E9PWQ3 AC154248.1-201ENSMUST00000222072 495 ntTSL 5 BASIC6.16□□□□□ -1.42
Col6a3E9PWQ3 1700129C05Rik-201ENSMUST00000022548 1067 ntAPPRIS P2 TSL 1 (best) BASIC6.16□□□□□ -1.42
Col6a3E9PWQ3 Rpl21-ps4-201ENSMUST00000080237 438 ntBASIC6.16□□□□□ -1.42
Col6a3E9PWQ3 Pex5l-211ENSMUST00000194016 4206 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Col6a3E9PWQ3 Gm37114-201ENSMUST00000195065 1804 ntBASIC6.16□□□□□ -1.42
Col6a3E9PWQ3 Rbfox1-201ENSMUST00000056416 4084 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Col6a3E9PWQ3 Akap12-201ENSMUST00000045730 6195 ntAPPRIS P2 TSL 1 (best) BASIC6.16□□□□□ -1.42
Col6a3E9PWQ3 Fam205a1-201ENSMUST00000107979 4146 ntAPPRIS P1 TSL 3 BASIC6.16□□□□□ -1.42
Col6a3E9PWQ3 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Col6a3E9PWQ3 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Col6a3E9PWQ3 Glrx2-204ENSMUST00000129653 3515 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
Col6a3E9PWQ3 Gm14743-201ENSMUST00000114026 759 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Col6a3E9PWQ3 Gm12427-201ENSMUST00000117719 302 ntBASIC6.16□□□□□ -1.42
Col6a3E9PWQ3 Gm12610-201ENSMUST00000139272 581 ntTSL 3 BASIC6.16□□□□□ -1.42
Col6a3E9PWQ3 Rfpl4-202ENSMUST00000179971 1445 ntAPPRIS P2 TSL 1 (best) BASIC6.16□□□□□ -1.42
Col6a3E9PWQ3 Peak1os-201ENSMUST00000181444 1264 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Col6a3E9PWQ3 Gm38053-201ENSMUST00000193938 160 ntBASIC6.16□□□□□ -1.42
Col6a3E9PWQ3 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC6.16□□□□□ -1.42
Col6a3E9PWQ3 Gm38843-201ENSMUST00000209189 323 ntTSL 5 BASIC6.16□□□□□ -1.42
Col6a3E9PWQ3 Olfr587-ps1-202ENSMUST00000209201 477 ntBASIC6.16□□□□□ -1.42
Col6a3E9PWQ3 Gm6145-203ENSMUST00000210557 835 ntTSL 5 BASIC6.16□□□□□ -1.42
Col6a3E9PWQ3 Olfr1026-202ENSMUST00000217615 1538 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Col6a3E9PWQ3 Olfr521-203ENSMUST00000220001 2254 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms