Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Gm20597-201ENSMUST00000218774 5486 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Scn3aA2ASI5 Olfr1232-202ENSMUST00000213860 2413 ntAPPRIS P1 TSL 3 BASIC7.1□□□□□ -1.27
Scn3aA2ASI5 Bbs12-201ENSMUST00000057975 2433 ntAPPRIS P1 TSL 2 BASIC7.1□□□□□ -1.27
Scn3aA2ASI5 Olfr994-202ENSMUST00000214679 1648 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
Scn3aA2ASI5 Etv1-201ENSMUST00000095767 6576 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Scn3aA2ASI5 Gm44229-201ENSMUST00000203211 2487 ntBASIC7.1□□□□□ -1.27
Scn3aA2ASI5 Pecam1-204ENSMUST00000106796 3441 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
Scn3aA2ASI5 Gm5427-201ENSMUST00000217680 2591 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Scn3aA2ASI5 Fcgr2b-201ENSMUST00000027966 3544 ntAPPRIS P4 TSL 1 (best) BASIC7.1□□□□□ -1.27
Scn3aA2ASI5 Tm9sf4-201ENSMUST00000089027 3896 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Scn3aA2ASI5 Akr1c19-202ENSMUST00000118663 5832 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
Scn3aA2ASI5 Olfr1199-202ENSMUST00000124021 2967 ntAPPRIS P1 TSL 3 BASIC7.1□□□□□ -1.27
Scn3aA2ASI5 Olfr491-203ENSMUST00000214605 2136 ntAPPRIS P1 TSL 2 BASIC7.1□□□□□ -1.27
Scn3aA2ASI5 Tlr11-202ENSMUST00000185091 3207 ntAPPRIS P2 TSL 2 BASIC7.1□□□□□ -1.27
Scn3aA2ASI5 Gm13291-201ENSMUST00000143527 655 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Scn3aA2ASI5 Gm27210-201ENSMUST00000184263 402 ntBASIC7.1□□□□□ -1.27
Scn3aA2ASI5 1700023F02Rik-202ENSMUST00000188279 412 ntTSL 2 BASIC7.1□□□□□ -1.27
Scn3aA2ASI5 1700124L16Rik-202ENSMUST00000189308 546 ntTSL 5 BASIC7.1□□□□□ -1.27
Scn3aA2ASI5 2310008N11Rik-201ENSMUST00000189978 568 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Scn3aA2ASI5 Gm5065-202ENSMUST00000207531 807 ntAPPRIS P1 TSL 3 BASIC7.1□□□□□ -1.27
Scn3aA2ASI5 2310008N11Rik-203ENSMUST00000210732 601 ntTSL 5 BASIC7.1□□□□□ -1.27
Scn3aA2ASI5 CT010456.3-201ENSMUST00000221210 523 ntTSL 5 BASIC7.1□□□□□ -1.27
Scn3aA2ASI5 Gm34557-201ENSMUST00000223115 375 ntTSL 3 BASIC7.1□□□□□ -1.27
Scn3aA2ASI5 Ppp1r1c-201ENSMUST00000040863 629 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Scn3aA2ASI5 Mir484-201ENSMUST00000093566 67 ntBASIC7.1□□□□□ -1.27
Scn3aA2ASI5 Kcnj15-205ENSMUST00000113858 5309 ntTSL 5 BASIC7.1□□□□□ -1.27
Scn3aA2ASI5 BC003331-201ENSMUST00000006167 1716 ntAPPRIS ALT2 TSL 5 BASIC7.1□□□□□ -1.27
Scn3aA2ASI5 Peak1-201ENSMUST00000061552 6996 ntAPPRIS P2 TSL 1 (best) BASIC7.1□□□□□ -1.27
Scn3aA2ASI5 Cep135-201ENSMUST00000049060 5313 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Scn3aA2ASI5 Zfp317-203ENSMUST00000213725 2354 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Scn3aA2ASI5 Dixdc1-201ENSMUST00000034566 5709 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Scn3aA2ASI5 Zfp791-202ENSMUST00000211109 2946 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Scn3aA2ASI5 Kif4-ps-201ENSMUST00000184686 3665 ntBASIC7.1□□□□□ -1.27
Scn3aA2ASI5 Gm15475-201ENSMUST00000137673 3757 ntTSL 2 BASIC7.1□□□□□ -1.27
Scn3aA2ASI5 Tcf12-221ENSMUST00000185117 3986 ntAPPRIS ALT1 TSL 5 BASIC7.1□□□□□ -1.27
Scn3aA2ASI5 Oscp1-201ENSMUST00000035497 5013 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Scn3aA2ASI5 Zfp971-201ENSMUST00000108925 923 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Scn3aA2ASI5 Gm11105-201ENSMUST00000112781 478 ntBASIC7.09□□□□□ -1.27
Scn3aA2ASI5 Gm22710-201ENSMUST00000116892 125 ntBASIC7.09□□□□□ -1.27
Scn3aA2ASI5 Chchd7-204ENSMUST00000119403 695 ntAPPRIS P1 TSL 2 BASIC7.09□□□□□ -1.27
Scn3aA2ASI5 Gm15801-201ENSMUST00000120920 522 ntBASIC7.09□□□□□ -1.27
Scn3aA2ASI5 Gm15006-201ENSMUST00000121419 1122 ntBASIC7.09□□□□□ -1.27
Scn3aA2ASI5 Gm9428-201ENSMUST00000127214 769 ntBASIC7.09□□□□□ -1.27
Scn3aA2ASI5 Gm23225-201ENSMUST00000158121 114 ntBASIC7.09□□□□□ -1.27
Scn3aA2ASI5 Gm8783-201ENSMUST00000159764 522 ntBASIC7.09□□□□□ -1.27
Scn3aA2ASI5 Lrrc3b-202ENSMUST00000163937 1424 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Scn3aA2ASI5 Gm21772-201ENSMUST00000169213 478 ntBASIC7.09□□□□□ -1.27
Scn3aA2ASI5 Vmn2r9-201ENSMUST00000170419 2547 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
Scn3aA2ASI5 Gm17126-201ENSMUST00000172276 523 ntBASIC7.09□□□□□ -1.27
Scn3aA2ASI5 Mir7211-201ENSMUST00000184071 63 ntBASIC7.09□□□□□ -1.27
Scn3aA2ASI5 Gm28443-201ENSMUST00000189081 698 ntBASIC7.09□□□□□ -1.27
Scn3aA2ASI5 Gm30122-202ENSMUST00000218662 1556 ntTSL 5 BASIC7.09□□□□□ -1.27
Scn3aA2ASI5 4930529N20Rik-201ENSMUST00000220538 639 ntTSL 3 BASIC7.09□□□□□ -1.27
Scn3aA2ASI5 Tbc1d5-201ENSMUST00000024717 5435 ntAPPRIS P2 TSL 1 (best) BASIC7.09□□□□□ -1.27
Scn3aA2ASI5 Gm5582-201ENSMUST00000075251 522 ntBASIC7.09□□□□□ -1.27
Scn3aA2ASI5 Gm24405-201ENSMUST00000083033 167 ntBASIC7.09□□□□□ -1.27
Scn3aA2ASI5 Psd3-203ENSMUST00000093468 1739 ntAPPRIS P3 TSL 1 (best) BASIC7.09□□□□□ -1.27
Scn3aA2ASI5 Zfp970-201ENSMUST00000099002 794 ntTSL 2 BASIC7.09□□□□□ -1.27
Scn3aA2ASI5 Gm14391-201ENSMUST00000099028 473 ntTSL 5 BASIC7.09□□□□□ -1.27
Scn3aA2ASI5 D030068K23Rik-202ENSMUST00000180524 3677 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Scn3aA2ASI5 Pcmtd2-201ENSMUST00000029116 3569 ntAPPRIS P3 TSL 1 (best) BASIC7.09□□□□□ -1.27
Scn3aA2ASI5 Epb41-201ENSMUST00000030739 6565 ntAPPRIS P3 TSL 5 BASIC7.09□□□□□ -1.27
Scn3aA2ASI5 RMST_1.1-210ENSMUST00000219606 2891 ntTSL 5 BASIC7.09□□□□□ -1.27
Scn3aA2ASI5 Xrn1-201ENSMUST00000034981 5499 ntAPPRIS P3 TSL 1 (best) BASIC7.09□□□□□ -1.27
Scn3aA2ASI5 Pnpla8-202ENSMUST00000122902 2728 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.27
Scn3aA2ASI5 Gm44046-201ENSMUST00000203145 2678 ntBASIC7.09□□□□□ -1.27
Scn3aA2ASI5 Vmn1r22-206ENSMUST00000228905 2394 ntBASIC7.09□□□□□ -1.27
Scn3aA2ASI5 Gm4994-201ENSMUST00000118379 2187 ntBASIC7.09□□□□□ -1.27
Scn3aA2ASI5 Tnfrsf22-201ENSMUST00000075588 4170 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.27
Scn3aA2ASI5 Gm43982-201ENSMUST00000204995 1829 ntBASIC7.09□□□□□ -1.27
Scn3aA2ASI5 Gm37086-201ENSMUST00000193082 3452 ntBASIC7.09□□□□□ -1.27
Scn3aA2ASI5 Vmn2r121-201ENSMUST00000094491 3062 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
Scn3aA2ASI5 Shprh-202ENSMUST00000054814 7225 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.27
Scn3aA2ASI5 Tmem68-201ENSMUST00000029891 2690 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Scn3aA2ASI5 AC166358.5-201ENSMUST00000220706 1302 ntBASIC7.09□□□□□ -1.27
Scn3aA2ASI5 Trps1-206ENSMUST00000184458 5293 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.27
Scn3aA2ASI5 Mir678-201ENSMUST00000102114 84 ntBASIC7.09□□□□□ -1.27
Scn3aA2ASI5 Gm22372-201ENSMUST00000104589 136 ntBASIC7.09□□□□□ -1.27
Scn3aA2ASI5 Gm12040-201ENSMUST00000118357 537 ntBASIC7.09□□□□□ -1.27
Scn3aA2ASI5 Gm25459-201ENSMUST00000157953 114 ntBASIC7.09□□□□□ -1.27
Scn3aA2ASI5 Clec4a2-204ENSMUST00000161365 918 ntAPPRIS P3 TSL 1 (best) BASIC7.09□□□□□ -1.27
Scn3aA2ASI5 Gm24081-201ENSMUST00000175177 125 ntBASIC7.09□□□□□ -1.27
Scn3aA2ASI5 Gm5947-201ENSMUST00000179156 714 ntBASIC7.09□□□□□ -1.27
Scn3aA2ASI5 Gm5645-201ENSMUST00000179597 714 ntBASIC7.09□□□□□ -1.27
Scn3aA2ASI5 Gm38303-201ENSMUST00000192603 536 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
Scn3aA2ASI5 Gm32950-201ENSMUST00000193336 232 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Scn3aA2ASI5 Gm42916-201ENSMUST00000197142 1042 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Scn3aA2ASI5 Gm42205-201ENSMUST00000199244 804 ntTSL 3 BASIC7.09□□□□□ -1.27
Scn3aA2ASI5 Gm18467-201ENSMUST00000208805 434 ntBASIC7.09□□□□□ -1.27
Scn3aA2ASI5 AC121788.1-201ENSMUST00000218514 1046 ntTSL 5 BASIC7.09□□□□□ -1.27
Scn3aA2ASI5 Gm32172-201ENSMUST00000220029 633 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Scn3aA2ASI5 AC159622.2-201ENSMUST00000221592 983 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Scn3aA2ASI5 Olfr410-201ENSMUST00000052254 948 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
Scn3aA2ASI5 Tti1-202ENSMUST00000109522 3765 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Scn3aA2ASI5 Olfr1500-207ENSMUST00000219674 2287 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.28
Scn3aA2ASI5 Gm36981-201ENSMUST00000192340 4485 ntBASIC7.08□□□□□ -1.28
Scn3aA2ASI5 Csde1-214ENSMUST00000199240 3457 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Scn3aA2ASI5 Vmn1r8-203ENSMUST00000228690 1699 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
Scn3aA2ASI5 Gm6614-203ENSMUST00000181791 2450 ntAPPRIS P2 TSL 5 BASIC7.08□□□□□ -1.28
Scn3aA2ASI5 Zc2hc1a-201ENSMUST00000051064 3292 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 82.7 ms