Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Psg20-201ENSMUST00000076677 1428 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Trim41Q5NCC3 Rpl31-ps17-201ENSMUST00000097040 378 ntBASIC13.09□□□□□ -0.31
Trim41Q5NCC3 Ikbkg-217ENSMUST00000164101 6788 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Trim41Q5NCC3 Ikbkg-218ENSMUST00000180230 6785 ntAPPRIS P3 TSL 5 BASIC13.09□□□□□ -0.31
Trim41Q5NCC3 Gm3203-201ENSMUST00000197670 2389 ntBASIC13.09□□□□□ -0.31
Trim41Q5NCC3 Cyp2c29-201ENSMUST00000003137 1783 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim41Q5NCC3 Olfr972-202ENSMUST00000215303 1641 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
Trim41Q5NCC3 Lbhd1-202ENSMUST00000187504 3164 ntAPPRIS P1 TSL 3 BASIC13.09□□□□□ -0.31
Trim41Q5NCC3 Cdh23-202ENSMUST00000105461 11096 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Trim41Q5NCC3 Slc38a1-203ENSMUST00000100262 7752 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim41Q5NCC3 Olfr449-202ENSMUST00000204072 1974 ntAPPRIS P1 TSL 3 BASIC13.09□□□□□ -0.31
Trim41Q5NCC3 Rps6ka6-201ENSMUST00000065976 3867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trim41Q5NCC3 CT009734.1-201ENSMUST00000227657 1687 ntBASIC13.08□□□□□ -0.31
Trim41Q5NCC3 Gm7972-203ENSMUST00000209180 2184 ntTSL 3 BASIC13.08□□□□□ -0.31
Trim41Q5NCC3 A730085K08Rik-201ENSMUST00000177015 2013 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Trim41Q5NCC3 Olfr225-202ENSMUST00000213169 2658 ntAPPRIS P5 TSL 5 BASIC13.08□□□□□ -0.31
Trim41Q5NCC3 Myo6-201ENSMUST00000035889 7871 ntTSL 5 BASIC13.08□□□□□ -0.32
Trim41Q5NCC3 Rgs4-202ENSMUST00000111357 2575 ntTSL 5 BASIC13.08□□□□□ -0.32
Trim41Q5NCC3 Lpcat2b-201ENSMUST00000166599 2782 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.32
Trim41Q5NCC3 Igkv4-68-201ENSMUST00000103350 394 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Trim41Q5NCC3 Igkv4-59-201ENSMUST00000103354 368 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Trim41Q5NCC3 Tpmt-202ENSMUST00000110118 881 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trim41Q5NCC3 Gm22676-201ENSMUST00000116972 129 ntBASIC13.08□□□□□ -0.32
Trim41Q5NCC3 Gm15001-201ENSMUST00000117657 795 ntBASIC13.08□□□□□ -0.32
Trim41Q5NCC3 Gm13489-201ENSMUST00000121234 971 ntBASIC13.08□□□□□ -0.32
Trim41Q5NCC3 Spanxn4-201ENSMUST00000172433 424 ntBASIC13.08□□□□□ -0.32
Trim41Q5NCC3 Gm20612-201ENSMUST00000176318 236 ntBASIC13.08□□□□□ -0.32
Trim41Q5NCC3 Gm6472-201ENSMUST00000178147 651 ntBASIC13.08□□□□□ -0.32
Trim41Q5NCC3 Gm26713-201ENSMUST00000181827 627 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trim41Q5NCC3 Gm9423-201ENSMUST00000183173 997 ntBASIC13.08□□□□□ -0.32
Trim41Q5NCC3 Gm9114-201ENSMUST00000188558 997 ntBASIC13.08□□□□□ -0.32
Trim41Q5NCC3 Gm29477-201ENSMUST00000189860 499 ntTSL 5 BASIC13.08□□□□□ -0.32
Trim41Q5NCC3 Gm36993-201ENSMUST00000192983 2980 ntBASIC13.08□□□□□ -0.32
Trim41Q5NCC3 Gm20128-201ENSMUST00000196189 417 ntBASIC13.08□□□□□ -0.32
Trim41Q5NCC3 Gpn1-206ENSMUST00000202394 631 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trim41Q5NCC3 AC121793.1-201ENSMUST00000214211 633 ntTSL 5 BASIC13.08□□□□□ -0.32
Trim41Q5NCC3 AC163651.1-201ENSMUST00000222500 372 ntBASIC13.08□□□□□ -0.32
Trim41Q5NCC3 AC154642.1-201ENSMUST00000224173 740 ntBASIC13.08□□□□□ -0.32
Trim41Q5NCC3 Reg3g-201ENSMUST00000032089 771 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim41Q5NCC3 Ssxb5-201ENSMUST00000089370 602 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trim41Q5NCC3 Bex6-201ENSMUST00000099990 764 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Trim41Q5NCC3 7420700N18Rik-201ENSMUST00000209524 1644 ntTSL 5 BASIC13.08□□□□□ -0.32
Trim41Q5NCC3 Fbxw27-208ENSMUST00000212725 1483 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Trim41Q5NCC3 Gm19176-201ENSMUST00000222149 1831 ntBASIC13.08□□□□□ -0.32
Trim41Q5NCC3 Gm28824-201ENSMUST00000187496 2167 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trim41Q5NCC3 Gm28948-201ENSMUST00000188447 2167 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trim41Q5NCC3 Gm29472-201ENSMUST00000188599 2167 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trim41Q5NCC3 Gm28561-201ENSMUST00000189366 2167 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trim41Q5NCC3 Gm28732-201ENSMUST00000189632 2167 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trim41Q5NCC3 Gm38136-201ENSMUST00000194775 2167 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trim41Q5NCC3 Gm38296-201ENSMUST00000195205 2167 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trim41Q5NCC3 Grhl1-201ENSMUST00000020985 3070 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trim41Q5NCC3 Gm42455-201ENSMUST00000199761 2736 ntBASIC13.08□□□□□ -0.32
Trim41Q5NCC3 Olfr770-202ENSMUST00000203887 1658 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.32
Trim41Q5NCC3 Gm44581-201ENSMUST00000206227 1693 ntTSL 5 BASIC13.08□□□□□ -0.32
Trim41Q5NCC3 Ston1-201ENSMUST00000064035 3287 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
Trim41Q5NCC3 Vmn1r66-201ENSMUST00000060374 1524 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Trim41Q5NCC3 Epb41l5-203ENSMUST00000163147 3370 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trim41Q5NCC3 Vmn1r49-202ENSMUST00000203791 1356 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
Trim41Q5NCC3 Gm18491-201ENSMUST00000192492 1594 ntBASIC13.07□□□□□ -0.32
Trim41Q5NCC3 Cylc1-202ENSMUST00000210720 1969 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Trim41Q5NCC3 Mapk14-203ENSMUST00000114752 3148 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trim41Q5NCC3 Gm26720-201ENSMUST00000181260 3538 ntTSL 5 BASIC13.07□□□□□ -0.32
Trim41Q5NCC3 Coq8a-217ENSMUST00000170472 3928 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim41Q5NCC3 Gm8107-201ENSMUST00000117477 2009 ntBASIC13.07□□□□□ -0.32
Trim41Q5NCC3 Olfr569-202ENSMUST00000217024 4741 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Trim41Q5NCC3 Mettl21e-201ENSMUST00000054801 3211 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim41Q5NCC3 Gm12392-201ENSMUST00000118014 938 ntBASIC13.07□□□□□ -0.32
Trim41Q5NCC3 Gm14747-201ENSMUST00000149888 984 ntBASIC13.07□□□□□ -0.32
Trim41Q5NCC3 Gm17024-201ENSMUST00000165676 634 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trim41Q5NCC3 Crip3-206ENSMUST00000165993 735 ntTSL 2 BASIC13.07□□□□□ -0.32
Trim41Q5NCC3 Mir7028-201ENSMUST00000185016 64 ntBASIC13.07□□□□□ -0.32
Trim41Q5NCC3 Mlip-214ENSMUST00000185039 1295 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trim41Q5NCC3 1700028D13Rik-202ENSMUST00000187272 675 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trim41Q5NCC3 Mrgpra14-201ENSMUST00000189782 913 ntBASIC13.07□□□□□ -0.32
Trim41Q5NCC3 Gm29282-201ENSMUST00000190720 473 ntTSL 5 BASIC13.07□□□□□ -0.32
Trim41Q5NCC3 Spink8-202ENSMUST00000198988 768 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim41Q5NCC3 Gm33626-201ENSMUST00000206790 828 ntBASIC13.07□□□□□ -0.32
Trim41Q5NCC3 Olfr1452-ps1-201ENSMUST00000208396 925 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Trim41Q5NCC3 Olfr1455-ps1-201ENSMUST00000208608 771 ntBASIC13.07□□□□□ -0.32
Trim41Q5NCC3 Gm45478-201ENSMUST00000209472 211 ntBASIC13.07□□□□□ -0.32
Trim41Q5NCC3 Olfr490-202ENSMUST00000211345 1275 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Trim41Q5NCC3 Olfr369-ps1-201ENSMUST00000212589 836 ntBASIC13.07□□□□□ -0.32
Trim41Q5NCC3 4933404K13Rik-201ENSMUST00000214651 937 ntTSL 3 BASIC13.07□□□□□ -0.32
Trim41Q5NCC3 Gm46124-202ENSMUST00000217260 860 ntTSL 5 BASIC13.07□□□□□ -0.32
Trim41Q5NCC3 AC132384.8-201ENSMUST00000218152 1204 ntBASIC13.07□□□□□ -0.32
Trim41Q5NCC3 AC110176.1-201ENSMUST00000226219 504 ntBASIC13.07□□□□□ -0.32
Trim41Q5NCC3 Gm15421-201ENSMUST00000051985 443 ntTSL 3 BASIC13.07□□□□□ -0.32
Trim41Q5NCC3 Olfr218-201ENSMUST00000057548 942 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Trim41Q5NCC3 Krtap26-1-201ENSMUST00000095934 973 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Trim41Q5NCC3 Olfr679-201ENSMUST00000098158 952 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Trim41Q5NCC3 Nolc1-203ENSMUST00000223728 3523 ntAPPRIS ALT2 BASIC13.07□□□□□ -0.32
Trim41Q5NCC3 Zfp58-204ENSMUST00000171518 2300 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim41Q5NCC3 Daam1-202ENSMUST00000221317 5790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim41Q5NCC3 AC147639.2-202ENSMUST00000224834 1545 ntBASIC13.07□□□□□ -0.32
Trim41Q5NCC3 Med1-201ENSMUST00000018304 5845 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim41Q5NCC3 Acsm5-201ENSMUST00000066465 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim41Q5NCC3 AC158622.2-201ENSMUST00000217363 2552 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trim41Q5NCC3 Lcorl-201ENSMUST00000016026 4884 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trim41Q5NCC3 Musk-203ENSMUST00000098057 3422 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 89.2 ms