Protein–RNA interactions for Protein: Q03358

Msx2, Homeobox protein MSX-2, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx2Q03358 Scn3a-201ENSMUST00000066432 9560 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
Msx2Q03358 Srgap1-201ENSMUST00000020322 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Msx2Q03358 Gm42930-201ENSMUST00000200872 3260 ntBASIC6.85□□□□□ -1.31
Msx2Q03358 Gm43876-201ENSMUST00000203831 3229 ntBASIC6.85□□□□□ -1.31
Msx2Q03358 Gm8836-201ENSMUST00000198196 1348 ntBASIC6.85□□□□□ -1.31
Msx2Q03358 Eci3-201ENSMUST00000021853 1347 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Msx2Q03358 Trps1-204ENSMUST00000183757 6202 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
Msx2Q03358 Plekhh2-201ENSMUST00000047206 6886 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Msx2Q03358 Med12-203ENSMUST00000117203 6816 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
Msx2Q03358 Gm22150-201ENSMUST00000104447 135 ntBASIC6.85□□□□□ -1.31
Msx2Q03358 Gm14786-201ENSMUST00000117127 944 ntBASIC6.85□□□□□ -1.31
Msx2Q03358 Gm11928-201ENSMUST00000119323 437 ntBASIC6.85□□□□□ -1.31
Msx2Q03358 Gm15186-201ENSMUST00000119345 563 ntBASIC6.85□□□□□ -1.31
Msx2Q03358 Sel1l2-201ENSMUST00000120133 579 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Msx2Q03358 Gm15166-201ENSMUST00000120790 385 ntBASIC6.85□□□□□ -1.31
Msx2Q03358 Gm12819-201ENSMUST00000122223 629 ntBASIC6.85□□□□□ -1.31
Msx2Q03358 Gm1947-201ENSMUST00000122451 910 ntBASIC6.85□□□□□ -1.31
Msx2Q03358 Gm2800-201ENSMUST00000122988 641 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Msx2Q03358 Gm8865-201ENSMUST00000125697 430 ntBASIC6.85□□□□□ -1.31
Msx2Q03358 Pabpn1-203ENSMUST00000139985 903 ntAPPRIS ALT2 TSL 2 BASIC6.85□□□□□ -1.31
Msx2Q03358 Nr6a1os-202ENSMUST00000151229 525 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Msx2Q03358 Gm15351-203ENSMUST00000153095 406 ntTSL 3 BASIC6.85□□□□□ -1.31
Msx2Q03358 Gm22186-201ENSMUST00000157822 122 ntBASIC6.85□□□□□ -1.31
Msx2Q03358 Dab2-209ENSMUST00000161040 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
Msx2Q03358 Gm17097-201ENSMUST00000166414 714 ntBASIC6.85□□□□□ -1.31
Msx2Q03358 Cldn34c1-206ENSMUST00000169445 705 ntAPPRIS P3 TSL 5 BASIC6.85□□□□□ -1.31
Msx2Q03358 Nup205-202ENSMUST00000170234 1120 ntTSL 5 BASIC6.85□□□□□ -1.31
Msx2Q03358 Gm17198-201ENSMUST00000171792 1154 ntBASIC6.85□□□□□ -1.31
Msx2Q03358 Gm25692-201ENSMUST00000175444 125 ntBASIC6.85□□□□□ -1.31
Msx2Q03358 Trav7-3-201ENSMUST00000177622 402 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
Msx2Q03358 Cldn34c3-201ENSMUST00000178148 702 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
Msx2Q03358 Cldn34c2-201ENSMUST00000178457 702 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
Msx2Q03358 Gm26436-201ENSMUST00000180325 132 ntBASIC6.85□□□□□ -1.31
Msx2Q03358 Gm7299-201ENSMUST00000194441 581 ntBASIC6.85□□□□□ -1.31
Msx2Q03358 Gm38204-201ENSMUST00000194835 619 ntTSL 2 BASIC6.85□□□□□ -1.31
Msx2Q03358 Gm8925-201ENSMUST00000197212 763 ntBASIC6.85□□□□□ -1.31
Msx2Q03358 Iglc3-201ENSMUST00000200235 452 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
Msx2Q03358 Gm42976-201ENSMUST00000200313 222 ntBASIC6.85□□□□□ -1.31
Msx2Q03358 Gm43810-201ENSMUST00000201018 232 ntBASIC6.85□□□□□ -1.31
Msx2Q03358 Gm17768-201ENSMUST00000201257 378 ntTSL 5 BASIC6.85□□□□□ -1.31
Msx2Q03358 6720469O03Rik-201ENSMUST00000206785 1201 ntBASIC6.85□□□□□ -1.31
Msx2Q03358 Gm45627-201ENSMUST00000210130 977 ntTSL 5 BASIC6.85□□□□□ -1.31
Msx2Q03358 Olfr654-202ENSMUST00000210457 1156 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
Msx2Q03358 AC124778.1-201ENSMUST00000216013 162 ntBASIC6.85□□□□□ -1.31
Msx2Q03358 AC166052.1-201ENSMUST00000217028 397 ntTSL 2 BASIC6.85□□□□□ -1.31
Msx2Q03358 Gm32281-202ENSMUST00000217220 691 ntTSL 3 BASIC6.85□□□□□ -1.31
Msx2Q03358 AC131912.1-201ENSMUST00000217527 290 ntTSL 5 BASIC6.85□□□□□ -1.31
Msx2Q03358 Gm8633-201ENSMUST00000218457 558 ntTSL 3 BASIC6.85□□□□□ -1.31
Msx2Q03358 AC154506.2-201ENSMUST00000225481 1276 ntBASIC6.85□□□□□ -1.31
Msx2Q03358 Yipf7-201ENSMUST00000031045 1219 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Msx2Q03358 Tsx-201ENSMUST00000033691 812 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Msx2Q03358 Dppa3-201ENSMUST00000049644 833 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Msx2Q03358 Olfr867-201ENSMUST00000060780 996 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
Msx2Q03358 Olfr888-201ENSMUST00000075228 945 ntBASIC6.85□□□□□ -1.31
Msx2Q03358 Mir135b-201ENSMUST00000083501 97 ntBASIC6.85□□□□□ -1.31
Msx2Q03358 Olfr1179-201ENSMUST00000099825 924 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
Msx2Q03358 Olfr239-203ENSMUST00000214406 3773 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
Msx2Q03358 Lilra6-202ENSMUST00000090689 1977 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Msx2Q03358 Olfr305-204ENSMUST00000216700 3734 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
Msx2Q03358 Gm33167-201ENSMUST00000201933 2643 ntBASIC6.85□□□□□ -1.31
Msx2Q03358 AC124680.1-201ENSMUST00000223923 1585 ntBASIC6.85□□□□□ -1.31
Msx2Q03358 Impg2-204ENSMUST00000160116 3992 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
Msx2Q03358 Gm9403-201ENSMUST00000196299 2181 ntBASIC6.85□□□□□ -1.31
Msx2Q03358 Oprk1-203ENSMUST00000160339 2481 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
Msx2Q03358 Pcdh15-205ENSMUST00000105429 6719 ntTSL 5 BASIC6.85□□□□□ -1.31
Msx2Q03358 Spam1-203ENSMUST00000202569 2107 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Msx2Q03358 Ptpra-202ENSMUST00000077303 3066 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Msx2Q03358 Ktn1-210ENSMUST00000187839 7945 ntAPPRIS P3 TSL 5 BASIC6.85□□□□□ -1.31
Msx2Q03358 Prkacb-204ENSMUST00000106138 3999 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Msx2Q03358 Smurf2-206ENSMUST00000167787 2358 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Msx2Q03358 Elmo1-202ENSMUST00000180626 2020 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Msx2Q03358 Gm29461-201ENSMUST00000189232 4176 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Msx2Q03358 Bmp10-201ENSMUST00000032125 4490 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Msx2Q03358 Tmem27-202ENSMUST00000112280 1389 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
Msx2Q03358 C230079O03Rik-201ENSMUST00000209560 1385 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Msx2Q03358 Il18r1-205ENSMUST00000193793 1652 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Msx2Q03358 3830408C21Rik-202ENSMUST00000223895 1689 ntBASIC6.84□□□□□ -1.31
Msx2Q03358 Nexn-201ENSMUST00000046045 2564 ntAPPRIS P2 TSL 1 (best) BASIC6.84□□□□□ -1.31
Msx2Q03358 Gm43483-201ENSMUST00000196724 2860 ntBASIC6.84□□□□□ -1.31
Msx2Q03358 Trpm8-204ENSMUST00000171176 3723 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Msx2Q03358 7420700N18Rik-201ENSMUST00000209524 1644 ntTSL 5 BASIC6.84□□□□□ -1.31
Msx2Q03358 Tshr-204ENSMUST00000221216 1638 ntTSL 5 BASIC6.84□□□□□ -1.31
Msx2Q03358 4932414J04Rik-201ENSMUST00000152483 3059 ntTSL 2 BASIC6.84□□□□□ -1.31
Msx2Q03358 Adgrl2-205ENSMUST00000196526 5615 ntTSL 5 BASIC6.84□□□□□ -1.31
Msx2Q03358 AC152922.2-201ENSMUST00000213353 3879 ntBASIC6.84□□□□□ -1.31
Msx2Q03358 Gm37382-201ENSMUST00000193032 1596 ntBASIC6.84□□□□□ -1.31
Msx2Q03358 4933409F18Rik-202ENSMUST00000222026 1584 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Msx2Q03358 Gmfg-202ENSMUST00000108289 477 ntTSL 3 BASIC6.84□□□□□ -1.31
Msx2Q03358 1700060C20Rik-201ENSMUST00000109506 605 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Msx2Q03358 Amelx-203ENSMUST00000112119 841 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.31
Msx2Q03358 Cd47-202ENSMUST00000114496 867 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Msx2Q03358 Celf2-203ENSMUST00000114923 529 ntTSL 3 BASIC6.84□□□□□ -1.31
Msx2Q03358 Gm5915-201ENSMUST00000116136 454 ntBASIC6.84□□□□□ -1.31
Msx2Q03358 Gm25315-201ENSMUST00000116823 121 ntBASIC6.84□□□□□ -1.31
Msx2Q03358 Gm12393-201ENSMUST00000117084 848 ntBASIC6.84□□□□□ -1.31
Msx2Q03358 Rpl23a-ps2-201ENSMUST00000119375 474 ntBASIC6.84□□□□□ -1.31
Msx2Q03358 Pramef12os-201ENSMUST00000133334 767 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Msx2Q03358 Zfp652os-201ENSMUST00000155531 537 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Msx2Q03358 Gm23229-201ENSMUST00000157297 105 ntBASIC6.84□□□□□ -1.31
Msx2Q03358 Cabcoco1-202ENSMUST00000166919 1016 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.31
Retrieved 100 of 76,532 protein–RNA pairs in 65.3 ms