Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 AC132596.1-201ENSMUST00000223043 2263 ntTSL 5 BASIC7.74□□□□□ -1.17
Sox18P43680 Ctxn3-201ENSMUST00000091892 1441 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Sox18P43680 A830010M20Rik-201ENSMUST00000060553 2439 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Sox18P43680 Cpsf2-201ENSMUST00000047357 5732 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Sox18P43680 Gm38243-201ENSMUST00000194737 1567 ntBASIC7.74□□□□□ -1.17
Sox18P43680 Hk1-203ENSMUST00000116238 3851 ntAPPRIS P4 TSL 1 (best) BASIC7.74□□□□□ -1.17
Sox18P43680 Ccnt1-201ENSMUST00000012104 2175 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Sox18P43680 Grhl3-201ENSMUST00000105855 2789 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Sox18P43680 Pxmp4-201ENSMUST00000000896 2789 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Sox18P43680 Unc45b-201ENSMUST00000018989 3549 ntAPPRIS P2 TSL 1 (best) BASIC7.74□□□□□ -1.17
Sox18P43680 Ap3b2-201ENSMUST00000082090 3804 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Sox18P43680 Gm31049-201ENSMUST00000201516 1302 ntBASIC7.74□□□□□ -1.17
Sox18P43680 Gm13108-201ENSMUST00000122287 1455 ntBASIC7.74□□□□□ -1.17
Sox18P43680 Vwa3b-203ENSMUST00000117172 1636 ntAPPRIS P5 TSL 2 BASIC7.74□□□□□ -1.17
Sox18P43680 Zfp354a-203ENSMUST00000109119 2078 ntAPPRIS ALT2 TSL 5 BASIC7.74□□□□□ -1.17
Sox18P43680 Ccdc38-203ENSMUST00000132214 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC7.74□□□□□ -1.17
Sox18P43680 Hmgxb4-201ENSMUST00000041759 4191 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Sox18P43680 Zc3h12c-201ENSMUST00000165519 6133 ntAPPRIS P2 TSL 5 BASIC7.74□□□□□ -1.17
Sox18P43680 Trpm3-206ENSMUST00000099569 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC7.74□□□□□ -1.17
Sox18P43680 Dlk1-208ENSMUST00000173539 3914 ntTSL 5 BASIC7.73□□□□□ -1.17
Sox18P43680 Synpo2-207ENSMUST00000198584 9203 ntAPPRIS ALT2 TSL 5 BASIC7.73□□□□□ -1.17
Sox18P43680 Gm7435-202ENSMUST00000216003 2424 ntBASIC7.73□□□□□ -1.17
Sox18P43680 Map3k7-204ENSMUST00000108184 5491 ntTSL 5 BASIC7.73□□□□□ -1.17
Sox18P43680 Gm13302-201ENSMUST00000119405 1849 ntBASIC7.73□□□□□ -1.17
Sox18P43680 Ces1c-201ENSMUST00000034189 1828 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Sox18P43680 Zfp40-201ENSMUST00000037057 4103 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Sox18P43680 Gm32486-201ENSMUST00000209810 3816 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Sox18P43680 Gm38404-201ENSMUST00000202005 2496 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Sox18P43680 Gm2108-201ENSMUST00000165058 2177 ntBASIC7.73□□□□□ -1.17
Sox18P43680 Gm29077-201ENSMUST00000185784 2169 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Sox18P43680 Gm28696-201ENSMUST00000189187 2169 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Sox18P43680 Gm28206-201ENSMUST00000190437 2169 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Sox18P43680 Gm37657-201ENSMUST00000195425 2169 ntTSL 5 BASIC7.73□□□□□ -1.17
Sox18P43680 Gm42837-201ENSMUST00000197071 2829 ntBASIC7.73□□□□□ -1.17
Sox18P43680 1700024B05Rik-201ENSMUST00000064162 1576 ntAPPRIS P5 TSL 1 (best) BASIC7.73□□□□□ -1.17
Sox18P43680 D030047H15Rik-201ENSMUST00000148318 2536 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Sox18P43680 AC166341.5-201ENSMUST00000222206 1400 ntBASIC7.73□□□□□ -1.17
Sox18P43680 March7-201ENSMUST00000067542 2244 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Sox18P43680 Gm24462-201ENSMUST00000102430 106 ntBASIC7.73□□□□□ -1.17
Sox18P43680 Atp5j-203ENSMUST00000114193 680 ntAPPRIS P1 TSL 2 BASIC7.73□□□□□ -1.17
Sox18P43680 Gm8855-201ENSMUST00000118888 878 ntBASIC7.73□□□□□ -1.17
Sox18P43680 Gm7058-201ENSMUST00000119209 902 ntBASIC7.73□□□□□ -1.17
Sox18P43680 Gm13444-201ENSMUST00000119445 522 ntBASIC7.73□□□□□ -1.17
Sox18P43680 Gm12611-201ENSMUST00000119452 1037 ntBASIC7.73□□□□□ -1.17
Sox18P43680 Hmgn2-ps1-201ENSMUST00000120716 279 ntBASIC7.73□□□□□ -1.17
Sox18P43680 Gm12642-201ENSMUST00000121098 876 ntBASIC7.73□□□□□ -1.17
Sox18P43680 Gm13409-201ENSMUST00000122072 546 ntBASIC7.73□□□□□ -1.17
Sox18P43680 Amy2-ps1-201ENSMUST00000122117 1117 ntBASIC7.73□□□□□ -1.17
Sox18P43680 Gm15915-201ENSMUST00000147379 908 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Sox18P43680 Gm16064-201ENSMUST00000154997 464 ntTSL 2 BASIC7.73□□□□□ -1.17
Sox18P43680 Gm25909-201ENSMUST00000157619 121 ntBASIC7.73□□□□□ -1.17
Sox18P43680 Gm24853-201ENSMUST00000158026 121 ntBASIC7.73□□□□□ -1.17
Sox18P43680 Traj54-201ENSMUST00000165071 54 ntBASIC7.73□□□□□ -1.17
Sox18P43680 Gm10182-201ENSMUST00000178676 273 ntBASIC7.73□□□□□ -1.17
Sox18P43680 1700016G22Rik-202ENSMUST00000186843 594 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Sox18P43680 Gm29556-201ENSMUST00000187591 696 ntBASIC7.73□□□□□ -1.17
Sox18P43680 Shisa5-214ENSMUST00000198708 771 ntTSL 5 BASIC7.73□□□□□ -1.17
Sox18P43680 Tex26-207ENSMUST00000202920 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC7.73□□□□□ -1.17
Sox18P43680 Gm32772-201ENSMUST00000205898 594 ntTSL 3 BASIC7.73□□□□□ -1.17
Sox18P43680 AC122428.4-201ENSMUST00000213494 589 ntTSL 3 BASIC7.73□□□□□ -1.17
Sox18P43680 4930503E24Rik-202ENSMUST00000219657 942 ntBASIC7.73□□□□□ -1.17
Sox18P43680 AC104832.1-201ENSMUST00000222938 550 ntBASIC7.73□□□□□ -1.17
Sox18P43680 CT030705.2-201ENSMUST00000225301 556 ntBASIC7.73□□□□□ -1.17
Sox18P43680 AC113031.5-201ENSMUST00000227116 606 ntBASIC7.73□□□□□ -1.17
Sox18P43680 Gm23846-201ENSMUST00000083835 107 ntBASIC7.73□□□□□ -1.17
Sox18P43680 Gm16434-201ENSMUST00000100888 2066 ntAPPRIS P5 TSL 1 (best) BASIC7.73□□□□□ -1.17
Sox18P43680 Gm6676-201ENSMUST00000166493 2066 ntAPPRIS P5 TSL 1 (best) BASIC7.73□□□□□ -1.17
Sox18P43680 Olfr1512-202ENSMUST00000214980 2082 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
Sox18P43680 Zfp248-201ENSMUST00000069292 3683 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Sox18P43680 Nt5dc1-201ENSMUST00000047885 2743 ntAPPRIS P2 TSL 1 (best) BASIC7.73□□□□□ -1.17
Sox18P43680 Gm16316-201ENSMUST00000154065 3393 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Sox18P43680 Arpp21-230ENSMUST00000172380 3366 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Sox18P43680 Gm6356-201ENSMUST00000166618 1757 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
Sox18P43680 Gm38263-201ENSMUST00000195879 3059 ntBASIC7.73□□□□□ -1.17
Sox18P43680 Tmcc1-209ENSMUST00000173548 1622 ntAPPRIS ALT2 TSL 5 BASIC7.73□□□□□ -1.17
Sox18P43680 Col12a1-201ENSMUST00000071750 11511 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
Sox18P43680 Zfp952-201ENSMUST00000087666 2950 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Sox18P43680 Il18bp-201ENSMUST00000094134 1311 ntAPPRIS P2 TSL 1 (best) BASIC7.73□□□□□ -1.17
Sox18P43680 Fmn1-203ENSMUST00000102547 4967 ntAPPRIS P3 TSL 1 (best) BASIC7.73□□□□□ -1.17
Sox18P43680 Mrpl17-202ENSMUST00000124482 7300 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Sox18P43680 Gm26523-201ENSMUST00000180713 1658 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Sox18P43680 Olfr825-203ENSMUST00000216530 3502 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
Sox18P43680 Tenm4-202ENSMUST00000107165 10930 ntAPPRIS P4 TSL 1 (best) BASIC7.73□□□□□ -1.17
Sox18P43680 Wrn-204ENSMUST00000211498 4856 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Sox18P43680 Gm45001-201ENSMUST00000208279 2515 ntBASIC7.73□□□□□ -1.17
Sox18P43680 Arsj-201ENSMUST00000093976 3859 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Sox18P43680 Gm18880-201ENSMUST00000223333 1541 ntBASIC7.73□□□□□ -1.17
Sox18P43680 Mab21l3-201ENSMUST00000061831 3558 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Sox18P43680 Myo1e-201ENSMUST00000034745 4625 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Sox18P43680 Gm37569-201ENSMUST00000192111 1722 ntBASIC7.72□□□□□ -1.17
Sox18P43680 Elmo2-205ENSMUST00000103091 4695 ntAPPRIS P2 TSL 1 (best) BASIC7.72□□□□□ -1.17
Sox18P43680 Spag17os-201ENSMUST00000137776 2437 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Sox18P43680 Rbmx-201ENSMUST00000098470 3107 ntTSL 5 BASIC7.72□□□□□ -1.17
Sox18P43680 Lama3-202ENSMUST00000188815 5551 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Sox18P43680 Tmem63c-201ENSMUST00000110187 3327 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Sox18P43680 Smg7-201ENSMUST00000043560 5792 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
Sox18P43680 Ece2-207ENSMUST00000079600 3349 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
Sox18P43680 Tlr5-201ENSMUST00000110997 3199 ntAPPRIS P2 TSL 1 (best) BASIC7.72□□□□□ -1.17
Sox18P43680 Mkl2-201ENSMUST00000009713 5815 ntAPPRIS ALT2 TSL 5 BASIC7.72□□□□□ -1.17
Sox18P43680 Eif4enif1-201ENSMUST00000020734 3565 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Retrieved 100 of 76,532 protein–RNA pairs in 83 ms