Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC6.56□□□□□ -1.36
HttP42859 Gstz1-201ENSMUST00000063117 1656 ntAPPRIS P2 TSL 1 (best) BASIC6.56□□□□□ -1.36
HttP42859 Gm8878-201ENSMUST00000173552 1725 ntBASIC6.56□□□□□ -1.36
HttP42859 Celf2-226ENSMUST00000183209 3852 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
HttP42859 Mug-ps1-202ENSMUST00000189975 3293 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
HttP42859 Adh7-201ENSMUST00000090171 3432 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
HttP42859 Gm14098-201ENSMUST00000119295 623 ntBASIC6.56□□□□□ -1.36
HttP42859 Gm17511-201ENSMUST00000172206 342 ntBASIC6.56□□□□□ -1.36
HttP42859 4933416M07Rik-201ENSMUST00000181424 624 ntTSL 5 BASIC6.56□□□□□ -1.36
HttP42859 Gm28238-201ENSMUST00000188102 383 ntTSL 5 BASIC6.56□□□□□ -1.36
HttP42859 Gm28564-201ENSMUST00000190864 240 ntTSL 5 BASIC6.56□□□□□ -1.36
HttP42859 Olfr923-204ENSMUST00000219798 1068 ntBASIC6.56□□□□□ -1.36
HttP42859 AC156016.5-201ENSMUST00000228742 355 ntBASIC6.56□□□□□ -1.36
HttP42859 Ccl11-201ENSMUST00000000342 1082 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
HttP42859 Olfr923-201ENSMUST00000051238 1068 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
HttP42859 Nme5-201ENSMUST00000079287 843 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
HttP42859 Ddx58-201ENSMUST00000037907 3874 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
HttP42859 Gm28824-201ENSMUST00000187496 2167 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
HttP42859 Gm29472-201ENSMUST00000188599 2167 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
HttP42859 Ppp1r3b-202ENSMUST00000210337 4349 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
HttP42859 Cfap70-202ENSMUST00000022349 3549 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
HttP42859 Gtf3c3-201ENSMUST00000041638 4582 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
HttP42859 Pkd1l3-203ENSMUST00000212537 6576 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
HttP42859 Il1rapl2-201ENSMUST00000075471 2061 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
HttP42859 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
HttP42859 Gm29825-201ENSMUST00000214237 3775 ntTSL 5 BASIC6.56□□□□□ -1.36
HttP42859 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
HttP42859 Gm12127-201ENSMUST00000123278 706 ntTSL 3 BASIC6.56□□□□□ -1.36
HttP42859 Gm13175-201ENSMUST00000139479 466 ntTSL 3 BASIC6.56□□□□□ -1.36
HttP42859 Lgals8-208ENSMUST00000144283 1148 ntTSL 5 BASIC6.56□□□□□ -1.36
HttP42859 Gm29611-201ENSMUST00000186132 1011 ntTSL 5 BASIC6.56□□□□□ -1.36
HttP42859 Gm17934-201ENSMUST00000192818 422 ntBASIC6.56□□□□□ -1.36
HttP42859 4930597L12Rik-201ENSMUST00000196286 911 ntBASIC6.56□□□□□ -1.36
HttP42859 Gm6543-201ENSMUST00000197353 808 ntBASIC6.56□□□□□ -1.36
HttP42859 Gm2614-201ENSMUST00000223227 403 ntBASIC6.56□□□□□ -1.36
HttP42859 Gm28392-201ENSMUST00000077630 393 ntBASIC6.56□□□□□ -1.36
HttP42859 Wdr17-209ENSMUST00000150488 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
HttP42859 Ms4a4c-201ENSMUST00000072729 1723 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
HttP42859 Iqgap3-201ENSMUST00000071812 5756 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
HttP42859 Apobec3-209ENSMUST00000176325 2765 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
HttP42859 Gm15903-202ENSMUST00000199631 3518 ntBASIC6.56□□□□□ -1.36
HttP42859 Usp7-207ENSMUST00000160405 4745 ntTSL 5 BASIC6.55□□□□□ -1.36
HttP42859 Cx3cr1-202ENSMUST00000177637 3156 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
HttP42859 Adam28-202ENSMUST00000111072 3025 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
HttP42859 Amotl1-201ENSMUST00000013220 8957 ntAPPRIS P2 TSL 1 (best) BASIC6.55□□□□□ -1.36
HttP42859 Zfp317-203ENSMUST00000213725 2354 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
HttP42859 Zc3h12c-201ENSMUST00000165519 6133 ntAPPRIS P2 TSL 5 BASIC6.55□□□□□ -1.36
HttP42859 Fam227b-204ENSMUST00000178118 1599 ntAPPRIS P2 TSL 5 BASIC6.55□□□□□ -1.36
HttP42859 Ubtfl1-203ENSMUST00000169398 4430 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
HttP42859 Abhd2-201ENSMUST00000037315 6877 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
HttP42859 Gm13222-201ENSMUST00000119638 138 ntBASIC6.55□□□□□ -1.36
HttP42859 4930558G05Rik-201ENSMUST00000122848 494 ntTSL 5 BASIC6.55□□□□□ -1.36
HttP42859 Gm12066-201ENSMUST00000123592 443 ntTSL 3 BASIC6.55□□□□□ -1.36
HttP42859 Gm26106-201ENSMUST00000157254 228 ntBASIC6.55□□□□□ -1.36
HttP42859 Gm17102-201ENSMUST00000170929 906 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
HttP42859 Gm38303-201ENSMUST00000192603 536 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
HttP42859 Gm18100-201ENSMUST00000200897 452 ntBASIC6.55□□□□□ -1.36
HttP42859 Gm31510-202ENSMUST00000206795 239 ntTSL 3 BASIC6.55□□□□□ -1.36
HttP42859 CT030254.1-201ENSMUST00000225450 1078 ntBASIC6.55□□□□□ -1.36
HttP42859 Olfr68-201ENSMUST00000072513 948 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
HttP42859 Scgb2b27-201ENSMUST00000085620 512 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
HttP42859 Olfr547-201ENSMUST00000098229 936 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
HttP42859 Clasp2-201ENSMUST00000111838 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
HttP42859 Txndc9-201ENSMUST00000162031 3381 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
HttP42859 Gm42609-201ENSMUST00000196362 3306 ntTSL 2 BASIC6.55□□□□□ -1.36
HttP42859 Vmn1r84-204ENSMUST00000227427 2880 ntAPPRIS ALT2 BASIC6.55□□□□□ -1.36
HttP42859 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
HttP42859 CT025619.1-201ENSMUST00000214294 2331 ntTSL 5 BASIC6.55□□□□□ -1.36
HttP42859 Olfr1389-203ENSMUST00000217595 3549 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
HttP42859 3732407C23Rik-201ENSMUST00000222770 3540 ntBASIC6.55□□□□□ -1.36
HttP42859 Gm15107-201ENSMUST00000112796 2028 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
HttP42859 Ott-201ENSMUST00000177554 2028 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
HttP42859 Ott-202ENSMUST00000177606 2028 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
HttP42859 Gm15085-201ENSMUST00000178169 2028 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
HttP42859 Ott-203ENSMUST00000179348 2028 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
HttP42859 Gm42607-201ENSMUST00000200221 3393 ntBASIC6.55□□□□□ -1.36
HttP42859 Scd4-201ENSMUST00000058856 3306 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
HttP42859 Gm43421-201ENSMUST00000200044 2905 ntBASIC6.55□□□□□ -1.36
HttP42859 Tardbp-206ENSMUST00000105702 6425 ntTSL 5 BASIC6.55□□□□□ -1.36
HttP42859 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
HttP42859 Olfr47-202ENSMUST00000215569 1603 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
HttP42859 A330008L17Rik-202ENSMUST00000153366 2614 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
HttP42859 2810414N06Rik-201ENSMUST00000186444 1381 ntTSL 2 BASIC6.55□□□□□ -1.36
HttP42859 A930038B10Rik-201ENSMUST00000180412 4084 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
HttP42859 Nxf7-202ENSMUST00000113163 2233 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
HttP42859 Gm13930-201ENSMUST00000118569 368 ntBASIC6.55□□□□□ -1.36
HttP42859 Gm16057-201ENSMUST00000120811 759 ntBASIC6.55□□□□□ -1.36
HttP42859 Gm15735-201ENSMUST00000136187 514 ntTSL 3 BASIC6.55□□□□□ -1.36
HttP42859 G630016G05Rik-201ENSMUST00000152412 796 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
HttP42859 Gm6520-201ENSMUST00000200636 410 ntBASIC6.55□□□□□ -1.36
HttP42859 Gm10709-201ENSMUST00000213318 480 ntBASIC6.55□□□□□ -1.36
HttP42859 AC115793.1-201ENSMUST00000216605 215 ntBASIC6.55□□□□□ -1.36
HttP42859 Olfr827-201ENSMUST00000058123 1058 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
HttP42859 D330045A20Rik-202ENSMUST00000113030 3736 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
HttP42859 Dpp6-202ENSMUST00000101471 4491 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
HttP42859 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
HttP42859 Gm14391-203ENSMUST00000109056 1956 ntTSL 3 BASIC6.55□□□□□ -1.36
HttP42859 Xrn1-201ENSMUST00000034981 5499 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
HttP42859 Gbp4-201ENSMUST00000100962 4538 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
HttP42859 Mef2c-228ENSMUST00000199450 2862 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms