Protein–RNA interactions for Protein: P22518

Clk1, Dual specificity protein kinase CLK1, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1P22518 Gm45042-201ENSMUST00000207377 211 ntBASIC6.22□□□□□ -1.41
Clk1P22518 Gm44809-201ENSMUST00000208305 993 ntBASIC6.22□□□□□ -1.41
Clk1P22518 Gm35021-202ENSMUST00000210289 961 ntTSL 5 BASIC6.22□□□□□ -1.41
Clk1P22518 Gm45335-201ENSMUST00000210618 401 ntTSL 5 BASIC6.22□□□□□ -1.41
Clk1P22518 Gm18914-201ENSMUST00000214625 616 ntBASIC6.22□□□□□ -1.41
Clk1P22518 AC153528.1-201ENSMUST00000217696 434 ntTSL 3 BASIC6.22□□□□□ -1.41
Clk1P22518 AC131795.1-201ENSMUST00000219632 426 ntBASIC6.22□□□□□ -1.41
Clk1P22518 Gm17849-201ENSMUST00000219788 853 ntBASIC6.22□□□□□ -1.41
Clk1P22518 Gm18955-201ENSMUST00000223173 649 ntBASIC6.22□□□□□ -1.41
Clk1P22518 AC131117.2-202ENSMUST00000224539 547 ntBASIC6.22□□□□□ -1.41
Clk1P22518 AW822073-201ENSMUST00000075305 555 ntBASIC6.22□□□□□ -1.41
Clk1P22518 Gm6887-201ENSMUST00000080945 482 ntBASIC6.22□□□□□ -1.41
Clk1P22518 Gm6455-201ENSMUST00000095015 1072 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Clk1P22518 Olfr618-201ENSMUST00000098197 957 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Clk1P22518 Asap1-210ENSMUST00000176384 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Clk1P22518 Ogdh-201ENSMUST00000003461 4127 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Clk1P22518 Usp17lb-201ENSMUST00000076501 1407 ntAPPRIS P2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Clk1P22518 Chd6-201ENSMUST00000039782 10515 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Clk1P22518 Smarca2-203ENSMUST00000112637 1962 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Clk1P22518 AC121960.2-201ENSMUST00000227349 3446 ntBASIC6.22□□□□□ -1.41
Clk1P22518 Gm14935-201ENSMUST00000121528 1708 ntBASIC6.22□□□□□ -1.41
Clk1P22518 Cyp3a16-201ENSMUST00000031633 1730 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Clk1P22518 Nr6a1-210ENSMUST00000168098 5877 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
Clk1P22518 Foxp2-204ENSMUST00000115472 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Clk1P22518 Gm28112-201ENSMUST00000190898 1875 ntBASIC6.22□□□□□ -1.41
Clk1P22518 Cxcr1-202ENSMUST00000190313 1451 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Clk1P22518 AC156031.1-201ENSMUST00000217288 2555 ntBASIC6.21□□□□□ -1.41
Clk1P22518 Ankfy1-206ENSMUST00000155998 8030 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
Clk1P22518 AC117608.1-201ENSMUST00000225500 3418 ntBASIC6.21□□□□□ -1.41
Clk1P22518 Ralgapa2-205ENSMUST00000131824 5624 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.41
Clk1P22518 Mcm7-208ENSMUST00000148879 1351 ntTSL 5 BASIC6.21□□□□□ -1.41
Clk1P22518 Fmn1-209ENSMUST00000161731 4262 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.41
Clk1P22518 Sorbs2-231ENSMUST00000171337 5651 ntAPPRIS P4 TSL 1 (best) BASIC6.21□□□□□ -1.41
Clk1P22518 Gm18701-201ENSMUST00000188281 1536 ntBASIC6.21□□□□□ -1.42
Clk1P22518 Zfp811-202ENSMUST00000200914 3458 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Clk1P22518 Cntnap3-201ENSMUST00000091554 6344 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
Clk1P22518 Ipo5-201ENSMUST00000032898 4518 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Clk1P22518 Apoa2-202ENSMUST00000111319 458 ntAPPRIS P1 TSL 3 BASIC6.21□□□□□ -1.42
Clk1P22518 Gm11338-201ENSMUST00000120086 1160 ntBASIC6.21□□□□□ -1.42
Clk1P22518 4933401B06Rik-202ENSMUST00000142024 1219 ntBASIC6.21□□□□□ -1.42
Clk1P22518 A430048G15Rik-201ENSMUST00000149965 627 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Clk1P22518 Gm25717-201ENSMUST00000158631 353 ntBASIC6.21□□□□□ -1.42
Clk1P22518 Csnk2b-209ENSMUST00000174779 632 ntTSL 2 BASIC6.21□□□□□ -1.42
Clk1P22518 Gm25640-201ENSMUST00000175378 125 ntBASIC6.21□□□□□ -1.42
Clk1P22518 Gm28991-201ENSMUST00000186584 543 ntTSL 5 BASIC6.21□□□□□ -1.42
Clk1P22518 Gm28117-201ENSMUST00000188472 371 ntBASIC6.21□□□□□ -1.42
Clk1P22518 Gm38204-201ENSMUST00000194835 619 ntTSL 2 BASIC6.21□□□□□ -1.42
Clk1P22518 1700094M23Rik-202ENSMUST00000198047 675 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Clk1P22518 Gm7463-201ENSMUST00000201541 547 ntBASIC6.21□□□□□ -1.42
Clk1P22518 Gm42883-201ENSMUST00000202594 222 ntBASIC6.21□□□□□ -1.42
Clk1P22518 Gm9652-201ENSMUST00000209345 163 ntBASIC6.21□□□□□ -1.42
Clk1P22518 Spata19-204ENSMUST00000214287 642 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
Clk1P22518 AC166902.2-201ENSMUST00000215193 837 ntTSL 5 BASIC6.21□□□□□ -1.42
Clk1P22518 AC155709.1-201ENSMUST00000218794 162 ntBASIC6.21□□□□□ -1.42
Clk1P22518 Gm34047-201ENSMUST00000223547 606 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Clk1P22518 AC125064.1-201ENSMUST00000225801 295 ntBASIC6.21□□□□□ -1.42
Clk1P22518 AC106830.2-201ENSMUST00000226624 943 ntBASIC6.21□□□□□ -1.42
Clk1P22518 AC154640.1-202ENSMUST00000227828 496 ntBASIC6.21□□□□□ -1.42
Clk1P22518 Olfr1135-201ENSMUST00000099853 933 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Clk1P22518 Slmap-204ENSMUST00000112330 3962 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
Clk1P22518 Gm12057-201ENSMUST00000117244 1427 ntBASIC6.21□□□□□ -1.42
Clk1P22518 Vmn2r-ps133-201ENSMUST00000176979 2569 ntBASIC6.21□□□□□ -1.42
Clk1P22518 Pkd1l3-202ENSMUST00000109242 6606 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
Clk1P22518 Gm43469-201ENSMUST00000196084 4634 ntBASIC6.21□□□□□ -1.42
Clk1P22518 Prr14l-201ENSMUST00000120129 9959 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
Clk1P22518 Usp14-202ENSMUST00000116669 2019 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Clk1P22518 Mybpc1-202ENSMUST00000121629 3922 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
Clk1P22518 Gm15583-201ENSMUST00000116191 3510 ntBASIC6.21□□□□□ -1.42
Clk1P22518 AC165260.6-206ENSMUST00000223884 3698 ntBASIC6.21□□□□□ -1.42
Clk1P22518 Gm31049-201ENSMUST00000201516 1302 ntBASIC6.21□□□□□ -1.42
Clk1P22518 Lilrb4a-201ENSMUST00000217706 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
Clk1P22518 Trp53bp1-201ENSMUST00000110647 9405 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
Clk1P22518 Gm28407-201ENSMUST00000185630 1497 ntTSL 5 BASIC6.21□□□□□ -1.42
Clk1P22518 Gm28108-201ENSMUST00000186747 1497 ntTSL 5 BASIC6.21□□□□□ -1.42
Clk1P22518 Gm28218-202ENSMUST00000186782 1498 ntTSL 5 BASIC6.21□□□□□ -1.42
Clk1P22518 Gm29511-201ENSMUST00000187580 1497 ntTSL 5 BASIC6.21□□□□□ -1.42
Clk1P22518 Gm28367-201ENSMUST00000187942 1496 ntTSL 5 BASIC6.21□□□□□ -1.42
Clk1P22518 Gm29549-202ENSMUST00000189569 1497 ntTSL 5 BASIC6.21□□□□□ -1.42
Clk1P22518 Gm45183-201ENSMUST00000207937 1497 ntBASIC6.21□□□□□ -1.42
Clk1P22518 Slc17a4-201ENSMUST00000021769 1604 ntAPPRIS P2 TSL 5 BASIC6.21□□□□□ -1.42
Clk1P22518 Gm43317-201ENSMUST00000197924 2544 ntBASIC6.21□□□□□ -1.42
Clk1P22518 Olfr532-203ENSMUST00000213801 4232 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Clk1P22518 Nsun4-202ENSMUST00000030475 2439 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Clk1P22518 Olfr972-203ENSMUST00000216167 1522 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Clk1P22518 Slc24a2-203ENSMUST00000107157 10531 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Clk1P22518 Skil-201ENSMUST00000029194 6717 ntAPPRIS P3 TSL 5 BASIC6.2□□□□□ -1.42
Clk1P22518 Zfp607a-202ENSMUST00000205534 3511 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Clk1P22518 Bnip3l-201ENSMUST00000022634 3238 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Clk1P22518 C630031E19Rik-201ENSMUST00000218114 3059 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Clk1P22518 Nlrp1c-ps-202ENSMUST00000174668 3422 ntBASIC6.2□□□□□ -1.42
Clk1P22518 Eif4a2-203ENSMUST00000115341 1875 ntAPPRIS ALT1 TSL 5 BASIC6.2□□□□□ -1.42
Clk1P22518 Ints12-201ENSMUST00000029650 3101 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Clk1P22518 Zfp78-206ENSMUST00000208390 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
Clk1P22518 Olfr1338-203ENSMUST00000216559 2829 ntAPPRIS ALT1 TSL 5 BASIC6.2□□□□□ -1.42
Clk1P22518 Slc4a4-203ENSMUST00000130041 3335 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Clk1P22518 Olfr1032-202ENSMUST00000079298 1442 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Clk1P22518 Scn1a-201ENSMUST00000077489 8116 ntAPPRIS P3 TSL 5 BASIC6.2□□□□□ -1.42
Clk1P22518 Gm13030-201ENSMUST00000105805 655 ntAPPRIS P1 TSL 3 BASIC6.2□□□□□ -1.42
Clk1P22518 4930402F06Rik-201ENSMUST00000113009 1150 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
Clk1P22518 Gm11864-201ENSMUST00000116179 1220 ntBASIC6.2□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 88.2 ms