Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Isy1-201ENSMUST00000089497 5837 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Hoxd3P09027 Wdfy4-201ENSMUST00000061753 9681 ntAPPRIS P2 TSL 5 BASIC6.37□□□□□ -1.39
Hoxd3P09027 Tlr5-201ENSMUST00000110997 3199 ntAPPRIS P2 TSL 1 (best) BASIC6.37□□□□□ -1.39
Hoxd3P09027 Abcb11-204ENSMUST00000180142 4963 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
Hoxd3P09027 Rps6ka1-206ENSMUST00000168974 2982 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Hoxd3P09027 Tro-205ENSMUST00000151403 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
Hoxd3P09027 Pax6-208ENSMUST00000111088 4427 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Hoxd3P09027 Zscan26-202ENSMUST00000110485 4366 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Hoxd3P09027 Ppp1r3b-202ENSMUST00000210337 4349 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
Hoxd3P09027 Nudt13-201ENSMUST00000022343 2494 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Hoxd3P09027 Dlk1-208ENSMUST00000173539 3914 ntTSL 5 BASIC6.37□□□□□ -1.39
Hoxd3P09027 Add1-201ENSMUST00000001108 3898 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
Hoxd3P09027 Gm45292-201ENSMUST00000211232 2207 ntBASIC6.37□□□□□ -1.39
Hoxd3P09027 AL589871.1-201ENSMUST00000221299 3561 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Hoxd3P09027 Rbm43-202ENSMUST00000102768 2106 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Hoxd3P09027 Acad11-207ENSMUST00000189998 2030 ntTSL 5 BASIC6.37□□□□□ -1.39
Hoxd3P09027 Adgrl2-214ENSMUST00000199238 4670 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
Hoxd3P09027 Slc5a4b-201ENSMUST00000120757 3202 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Hoxd3P09027 Ston1-205ENSMUST00000150023 3231 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
Hoxd3P09027 Zfp426-210ENSMUST00000167457 4262 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Hoxd3P09027 Gm44249-201ENSMUST00000204538 1805 ntBASIC6.36□□□□□ -1.39
Hoxd3P09027 Erc2-210ENSMUST00000211145 2874 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Hoxd3P09027 Nme8-201ENSMUST00000039340 1704 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Hoxd3P09027 Rrm1-201ENSMUST00000033283 3997 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Hoxd3P09027 D630039A03Rik-201ENSMUST00000063816 2830 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Hoxd3P09027 Gbp9-202ENSMUST00000100961 2701 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Hoxd3P09027 Clcn3-205ENSMUST00000110302 3768 ntTSL 5 BASIC6.36□□□□□ -1.39
Hoxd3P09027 G630018N14Rik-203ENSMUST00000221171 5888 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Hoxd3P09027 Itgam-205ENSMUST00000120355 3701 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
Hoxd3P09027 Gm9871-203ENSMUST00000204837 1560 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Hoxd3P09027 Arhgap32-201ENSMUST00000168954 8703 ntTSL 5 BASIC6.36□□□□□ -1.39
Hoxd3P09027 Virma-202ENSMUST00000059914 6506 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Hoxd3P09027 Lgals8-207ENSMUST00000143693 2457 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Hoxd3P09027 AC160118.1-201ENSMUST00000214497 2457 ntBASIC6.36□□□□□ -1.39
Hoxd3P09027 Gnpnat1-206ENSMUST00000227468 1490 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Hoxd3P09027 Tex52-202ENSMUST00000130785 1424 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Hoxd3P09027 Gm8127-201ENSMUST00000163655 1427 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Hoxd3P09027 Pcdhga1-202ENSMUST00000194888 3247 ntAPPRIS ALT2 BASIC6.36□□□□□ -1.39
Hoxd3P09027 Vmn1r41-201ENSMUST00000204949 1378 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
Hoxd3P09027 Serpina1a-202ENSMUST00000085056 1360 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
Hoxd3P09027 Olfr521-202ENSMUST00000219663 2277 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Hoxd3P09027 Olfr521-203ENSMUST00000220001 2254 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Hoxd3P09027 Usp37-205ENSMUST00000189257 4974 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Hoxd3P09027 Trav5-4-201ENSMUST00000103664 343 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Hoxd3P09027 Cep112-203ENSMUST00000106718 839 ntTSL 5 BASIC6.36□□□□□ -1.39
Hoxd3P09027 Cga-202ENSMUST00000108130 609 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Hoxd3P09027 Eif2s3x-202ENSMUST00000113922 1103 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Hoxd3P09027 Gm14711-201ENSMUST00000117056 217 ntBASIC6.36□□□□□ -1.39
Hoxd3P09027 Gm15087-201ENSMUST00000117465 1172 ntBASIC6.36□□□□□ -1.39
Hoxd3P09027 Gm12354-201ENSMUST00000124319 554 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Hoxd3P09027 Gm16373-201ENSMUST00000129517 303 ntBASIC6.36□□□□□ -1.39
Hoxd3P09027 Gm11659-201ENSMUST00000137561 466 ntTSL 3 BASIC6.36□□□□□ -1.39
Hoxd3P09027 Gm12055-201ENSMUST00000143643 793 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Hoxd3P09027 Gm11482-201ENSMUST00000147067 719 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Hoxd3P09027 Gm13727-201ENSMUST00000154480 424 ntTSL 3 BASIC6.36□□□□□ -1.39
Hoxd3P09027 Gm22811-201ENSMUST00000157468 154 ntBASIC6.36□□□□□ -1.39
Hoxd3P09027 Gm22076-201ENSMUST00000158601 84 ntBASIC6.36□□□□□ -1.39
Hoxd3P09027 Gm8065-201ENSMUST00000164048 605 ntBASIC6.36□□□□□ -1.39
Hoxd3P09027 Gm20453-201ENSMUST00000173968 226 ntBASIC6.36□□□□□ -1.39
Hoxd3P09027 Gm19932-201ENSMUST00000177033 313 ntBASIC6.36□□□□□ -1.39
Hoxd3P09027 Trav5d-4-201ENSMUST00000179701 343 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Hoxd3P09027 Trav5n-4-201ENSMUST00000179997 343 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Hoxd3P09027 Mir3473f-201ENSMUST00000183743 136 ntBASIC6.36□□□□□ -1.39
Hoxd3P09027 Gm14214-201ENSMUST00000184654 678 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Hoxd3P09027 Gm37247-201ENSMUST00000192549 730 ntBASIC6.36□□□□□ -1.39
Hoxd3P09027 Gm10472-201ENSMUST00000193014 2102 ntBASIC6.36□□□□□ -1.39
Hoxd3P09027 Gm38289-201ENSMUST00000194273 597 ntTSL 5 BASIC6.36□□□□□ -1.39
Hoxd3P09027 Gm37095-201ENSMUST00000195421 205 ntBASIC6.36□□□□□ -1.39
Hoxd3P09027 Gm5660-201ENSMUST00000197453 1149 ntBASIC6.36□□□□□ -1.39
Hoxd3P09027 Gm4873-201ENSMUST00000199402 1203 ntBASIC6.36□□□□□ -1.39
Hoxd3P09027 Gm43468-201ENSMUST00000199769 397 ntTSL 3 BASIC6.36□□□□□ -1.39
Hoxd3P09027 Ighv1-79-201ENSMUST00000200152 350 ntBASIC6.36□□□□□ -1.39
Hoxd3P09027 Gm44221-201ENSMUST00000203552 388 ntBASIC6.36□□□□□ -1.39
Hoxd3P09027 Gm44060-201ENSMUST00000204440 410 ntBASIC6.36□□□□□ -1.39
Hoxd3P09027 Klk1b2-ps-201ENSMUST00000206099 786 ntBASIC6.36□□□□□ -1.39
Hoxd3P09027 Gm17987-201ENSMUST00000206902 603 ntBASIC6.36□□□□□ -1.39
Hoxd3P09027 Olfr1309-201ENSMUST00000207885 964 ntBASIC6.36□□□□□ -1.39
Hoxd3P09027 Gm5086-201ENSMUST00000210022 1297 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Hoxd3P09027 Gm45388-202ENSMUST00000211101 815 ntTSL 5 BASIC6.36□□□□□ -1.39
Hoxd3P09027 Gm3690-201ENSMUST00000211341 262 ntBASIC6.36□□□□□ -1.39
Hoxd3P09027 Gm7692-201ENSMUST00000213534 409 ntBASIC6.36□□□□□ -1.39
Hoxd3P09027 Gm8767-201ENSMUST00000215786 1070 ntBASIC6.36□□□□□ -1.39
Hoxd3P09027 AC160635.1-201ENSMUST00000216731 474 ntBASIC6.36□□□□□ -1.39
Hoxd3P09027 AC132304.1-201ENSMUST00000218860 135 ntBASIC6.36□□□□□ -1.39
Hoxd3P09027 CT009546.3-201ENSMUST00000220914 208 ntBASIC6.36□□□□□ -1.39
Hoxd3P09027 AC113198.1-201ENSMUST00000226353 832 ntBASIC6.36□□□□□ -1.39
Hoxd3P09027 AC107453.3-201ENSMUST00000228205 639 ntBASIC6.36□□□□□ -1.39
Hoxd3P09027 AC122877.1-201ENSMUST00000228873 218 ntBASIC6.36□□□□□ -1.39
Hoxd3P09027 Pmch-201ENSMUST00000048621 749 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Hoxd3P09027 Fcer1a-201ENSMUST00000049706 998 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Hoxd3P09027 Tprkb-201ENSMUST00000067137 2103 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Hoxd3P09027 Olfr969-201ENSMUST00000074566 936 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Hoxd3P09027 Gm10283-201ENSMUST00000093494 354 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Hoxd3P09027 Gm6455-201ENSMUST00000095015 1072 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Hoxd3P09027 Gfpt2-201ENSMUST00000020629 2947 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Hoxd3P09027 Gm29128-201ENSMUST00000186448 2858 ntTSL 5 BASIC6.36□□□□□ -1.39
Hoxd3P09027 Vmn1r44-208ENSMUST00000227456 2031 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Hoxd3P09027 Vmn1r44-213ENSMUST00000228700 2004 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Hoxd3P09027 Olfr1414-201ENSMUST00000062353 6017 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
Hoxd3P09027 Zcchc6-201ENSMUST00000071703 5869 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 83.1 ms