Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Ncoa7-210ENSMUST00000217138 2192 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Ube3bQ9ES34 Sp1-204ENSMUST00000165924 4081 ntAPPRIS P2 TSL 1 (best) BASIC8.89□□□□□ -0.99
Ube3bQ9ES34 Cebpz-201ENSMUST00000024885 4074 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Ube3bQ9ES34 Afap1l2-203ENSMUST00000122359 3667 ntAPPRIS P3 TSL 1 (best) BASIC8.89□□□□□ -0.99
Ube3bQ9ES34 Gm16427-202ENSMUST00000200745 1749 ntAPPRIS P5 TSL 2 BASIC8.89□□□□□ -0.99
Ube3bQ9ES34 Pfkfb1-201ENSMUST00000080884 1739 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Ube3bQ9ES34 Pp2d1-201ENSMUST00000056198 2476 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Ube3bQ9ES34 Tars2-203ENSMUST00000098857 3228 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Ube3bQ9ES34 Rai14-207ENSMUST00000227506 4732 ntAPPRIS ALT2 BASIC8.89□□□□□ -0.99
Ube3bQ9ES34 Gm42701-201ENSMUST00000196117 1657 ntBASIC8.89□□□□□ -0.99
Ube3bQ9ES34 Olfr825-203ENSMUST00000216530 3502 ntAPPRIS P1 TSL 5 BASIC8.89□□□□□ -0.99
Ube3bQ9ES34 Srek1ip1-201ENSMUST00000022230 2365 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Ube3bQ9ES34 A630010A05Rik-201ENSMUST00000100165 684 ntAPPRIS ALT2 TSL 5 BASIC8.89□□□□□ -0.99
Ube3bQ9ES34 Ighv11-2-201ENSMUST00000103468 461 ntAPPRIS P1 BASIC8.89□□□□□ -0.99
Ube3bQ9ES34 Eif3m-202ENSMUST00000111110 817 ntTSL 5 BASIC8.89□□□□□ -0.99
Ube3bQ9ES34 Gm17184-201ENSMUST00000111864 462 ntBASIC8.89□□□□□ -0.99
Ube3bQ9ES34 Serpina3h-202ENSMUST00000116393 1226 ntBASIC8.89□□□□□ -0.99
Ube3bQ9ES34 Gm2735-201ENSMUST00000136133 277 ntBASIC8.89□□□□□ -0.99
Ube3bQ9ES34 Gm15914-201ENSMUST00000161922 309 ntBASIC8.89□□□□□ -0.99
Ube3bQ9ES34 Vmn2r-ps75-201ENSMUST00000173251 213 ntBASIC8.89□□□□□ -0.99
Ube3bQ9ES34 Cers6-206ENSMUST00000176018 1279 ntAPPRIS ALT1 TSL 5 BASIC8.89□□□□□ -0.99
Ube3bQ9ES34 Gm21638-201ENSMUST00000179473 836 ntBASIC8.89□□□□□ -0.99
Ube3bQ9ES34 Gm2042-202ENSMUST00000180706 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC8.89□□□□□ -0.99
Ube3bQ9ES34 Gm8883-202ENSMUST00000188258 545 ntTSL 3 BASIC8.89□□□□□ -0.99
Ube3bQ9ES34 Gm28997-201ENSMUST00000188759 429 ntBASIC8.89□□□□□ -0.99
Ube3bQ9ES34 Gm20937-202ENSMUST00000189084 811 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Ube3bQ9ES34 Gm20736-203ENSMUST00000190282 836 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Ube3bQ9ES34 Oaz3-201ENSMUST00000191506 732 ntAPPRIS P2 TSL 5 BASIC8.89□□□□□ -0.99
Ube3bQ9ES34 Shisa5-214ENSMUST00000198708 771 ntTSL 5 BASIC8.89□□□□□ -0.99
Ube3bQ9ES34 Gm7285-201ENSMUST00000198801 580 ntBASIC8.89□□□□□ -0.99
Ube3bQ9ES34 Gm42594-201ENSMUST00000199511 246 ntBASIC8.89□□□□□ -0.99
Ube3bQ9ES34 Gm17992-201ENSMUST00000207346 1072 ntBASIC8.89□□□□□ -0.99
Ube3bQ9ES34 9130015A21Rik-202ENSMUST00000222153 837 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Ube3bQ9ES34 AC154426.1-201ENSMUST00000225614 1132 ntBASIC8.89□□□□□ -0.99
Ube3bQ9ES34 Lcn9-201ENSMUST00000023978 839 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Ube3bQ9ES34 1700028P14Rik-201ENSMUST00000035849 868 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Ube3bQ9ES34 Olfr1013-201ENSMUST00000065626 918 ntAPPRIS P1 BASIC8.89□□□□□ -0.99
Ube3bQ9ES34 Rny3-201ENSMUST00000083011 102 ntBASIC8.89□□□□□ -0.99
Ube3bQ9ES34 Gm10719-201ENSMUST00000099047 681 ntAPPRIS P5 TSL 5 BASIC8.89□□□□□ -0.99
Ube3bQ9ES34 Olfr1271-201ENSMUST00000099751 918 ntAPPRIS P1 BASIC8.89□□□□□ -0.99
Ube3bQ9ES34 Adarb2-201ENSMUST00000064473 6721 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Ube3bQ9ES34 Stox2-202ENSMUST00000110367 3424 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Ube3bQ9ES34 Mpzl3-203ENSMUST00000114664 3424 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Ube3bQ9ES34 Il1a-201ENSMUST00000028882 1974 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Ube3bQ9ES34 Khdc1a-201ENSMUST00000088407 1987 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Ube3bQ9ES34 Pogz-203ENSMUST00000107266 4100 ntAPPRIS ALT2 TSL 5 BASIC8.89□□□□□ -0.99
Ube3bQ9ES34 Gm45904-201ENSMUST00000213082 2330 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Ube3bQ9ES34 Zcchc6-201ENSMUST00000071703 5869 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Ube3bQ9ES34 Mx1-201ENSMUST00000023655 3385 ntAPPRIS P1 TSL 5 BASIC8.89□□□□□ -0.99
Ube3bQ9ES34 Tmcc1-203ENSMUST00000172510 2612 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Ube3bQ9ES34 Gm43209-201ENSMUST00000198949 1588 ntBASIC8.89□□□□□ -0.99
Ube3bQ9ES34 Elf5-201ENSMUST00000028609 2222 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Ube3bQ9ES34 Mettl15-201ENSMUST00000081631 1894 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Ube3bQ9ES34 Emsy-201ENSMUST00000038359 3564 ntAPPRIS ALT2 TSL 1 (best) BASIC8.89□□□□□ -0.99
Ube3bQ9ES34 Csde1-211ENSMUST00000198180 3849 ntAPPRIS ALT2 TSL 1 (best) BASIC8.89□□□□□ -0.99
Ube3bQ9ES34 Mcmdc2-201ENSMUST00000052843 2826 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Ube3bQ9ES34 Zfp663-202ENSMUST00000103085 3451 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Ube3bQ9ES34 Zkscan5-202ENSMUST00000085671 3794 ntAPPRIS P3 TSL 1 (best) BASIC8.89□□□□□ -0.99
Ube3bQ9ES34 Gm28279-201ENSMUST00000186248 1493 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Ube3bQ9ES34 Gm28491-202ENSMUST00000186902 1493 ntTSL 5 BASIC8.89□□□□□ -0.99
Ube3bQ9ES34 Gm29368-201ENSMUST00000187201 1489 ntTSL 5 BASIC8.89□□□□□ -0.99
Ube3bQ9ES34 Gm28088-202ENSMUST00000187402 1493 ntTSL 5 BASIC8.89□□□□□ -0.99
Ube3bQ9ES34 Gm28674-201ENSMUST00000187502 1493 ntTSL 5 BASIC8.89□□□□□ -0.99
Ube3bQ9ES34 Gm28131-203ENSMUST00000187841 1493 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Ube3bQ9ES34 Gm28487-202ENSMUST00000187894 1493 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Ube3bQ9ES34 Gm29056-201ENSMUST00000187933 1493 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Ube3bQ9ES34 Gm29074-203ENSMUST00000188026 1493 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Ube3bQ9ES34 Gm28754-201ENSMUST00000188778 1493 ntTSL 5 BASIC8.89□□□□□ -0.99
Ube3bQ9ES34 Gm28520-202ENSMUST00000189379 1493 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Ube3bQ9ES34 Gm28963-202ENSMUST00000189567 1493 ntTSL 5 BASIC8.89□□□□□ -0.99
Ube3bQ9ES34 Gm28519-203ENSMUST00000190126 1493 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Ube3bQ9ES34 Gm29207-202ENSMUST00000190931 1493 ntTSL 5 BASIC8.89□□□□□ -0.99
Ube3bQ9ES34 Gm28310-202ENSMUST00000191136 1493 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Ube3bQ9ES34 Gm29646-202ENSMUST00000191146 1493 ntTSL 5 BASIC8.89□□□□□ -0.99
Ube3bQ9ES34 Gm28762-203ENSMUST00000191259 1493 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Ube3bQ9ES34 Gm28691-202ENSMUST00000191561 1493 ntTSL 5 BASIC8.89□□□□□ -0.99
Ube3bQ9ES34 Gm38174-201ENSMUST00000191787 1494 ntTSL 5 BASIC8.89□□□□□ -0.99
Ube3bQ9ES34 4930473O22Rik-201ENSMUST00000218283 1465 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Ube3bQ9ES34 Gm12800-201ENSMUST00000075999 1455 ntAPPRIS P1 TSL 5 BASIC8.89□□□□□ -0.99
Ube3bQ9ES34 Gm6150-202ENSMUST00000219888 2977 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Ube3bQ9ES34 Siah3-201ENSMUST00000164848 4472 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Ube3bQ9ES34 Card6-201ENSMUST00000118365 5995 ntAPPRIS P1 TSL 5 BASIC8.88□□□□□ -0.99
Ube3bQ9ES34 Pkd1l1-203ENSMUST00000178195 6213 ntAPPRIS ALT2 TSL 5 BASIC8.88□□□□□ -0.99
Ube3bQ9ES34 Hsd11b1-201ENSMUST00000016338 1623 ntAPPRIS P2 TSL 1 (best) BASIC8.88□□□□□ -0.99
Ube3bQ9ES34 Zhx3-202ENSMUST00000103112 9109 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Ube3bQ9ES34 Vmn1r51-208ENSMUST00000227876 4160 ntAPPRIS P1 BASIC8.88□□□□□ -0.99
Ube3bQ9ES34 Ctnnd1-224ENSMUST00000111698 5850 ntTSL 5 BASIC8.88□□□□□ -0.99
Ube3bQ9ES34 Gm45182-201ENSMUST00000207579 2404 ntBASIC8.88□□□□□ -0.99
Ube3bQ9ES34 Gip-202ENSMUST00000103157 652 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Ube3bQ9ES34 Gm13030-201ENSMUST00000105805 655 ntAPPRIS P1 TSL 3 BASIC8.88□□□□□ -0.99
Ube3bQ9ES34 Gm12814-201ENSMUST00000117091 846 ntBASIC8.88□□□□□ -0.99
Ube3bQ9ES34 Gm14279-201ENSMUST00000117142 332 ntBASIC8.88□□□□□ -0.99
Ube3bQ9ES34 Rpl35a-ps2-201ENSMUST00000117444 333 ntBASIC8.88□□□□□ -0.99
Ube3bQ9ES34 Gm15422-201ENSMUST00000117453 541 ntBASIC8.88□□□□□ -0.99
Ube3bQ9ES34 Gm10243-201ENSMUST00000117571 333 ntBASIC8.88□□□□□ -0.99
Ube3bQ9ES34 Gm13282-201ENSMUST00000121577 545 ntBASIC8.88□□□□□ -0.99
Ube3bQ9ES34 Rpl35a-ps4-201ENSMUST00000121779 333 ntBASIC8.88□□□□□ -0.99
Ube3bQ9ES34 Gm15787-206ENSMUST00000141008 585 ntTSL 2 BASIC8.88□□□□□ -0.99
Ube3bQ9ES34 Rpl35a-ps3-201ENSMUST00000147311 333 ntBASIC8.88□□□□□ -0.99
Ube3bQ9ES34 Rpl35a-ps6-201ENSMUST00000148282 333 ntBASIC8.88□□□□□ -0.99
Retrieved 100 of 76,532 protein–RNA pairs in 73.8 ms