Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Gm8237-202ENSMUST00000178594 447 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
Msh4Q99MT2 Smim18-201ENSMUST00000179364 587 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Msh4Q99MT2 Gm26851-201ENSMUST00000181867 918 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Msh4Q99MT2 Gm21392-201ENSMUST00000182950 972 ntBASIC6.43□□□□□ -1.38
Msh4Q99MT2 Mocs2-217ENSMUST00000184781 1250 ntTSL 5 BASIC6.43□□□□□ -1.38
Msh4Q99MT2 1810012K16Rik-201ENSMUST00000190830 547 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Msh4Q99MT2 Gm38256-201ENSMUST00000192097 950 ntTSL 5 BASIC6.43□□□□□ -1.38
Msh4Q99MT2 1700054O19Rik-201ENSMUST00000193604 868 ntBASIC6.43□□□□□ -1.38
Msh4Q99MT2 Gm37614-201ENSMUST00000195645 210 ntBASIC6.43□□□□□ -1.38
Msh4Q99MT2 Csde1-206ENSMUST00000197488 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
Msh4Q99MT2 Gm32585-201ENSMUST00000198586 764 ntTSL 3 BASIC6.43□□□□□ -1.38
Msh4Q99MT2 Gm43089-201ENSMUST00000199162 275 ntBASIC6.43□□□□□ -1.38
Msh4Q99MT2 Gm36448-201ENSMUST00000199916 438 ntBASIC6.43□□□□□ -1.38
Msh4Q99MT2 Gm43849-201ENSMUST00000201086 215 ntBASIC6.43□□□□□ -1.38
Msh4Q99MT2 Gm4290-201ENSMUST00000206897 814 ntBASIC6.43□□□□□ -1.38
Msh4Q99MT2 Gm20751-201ENSMUST00000210260 1270 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Msh4Q99MT2 Gm33586-201ENSMUST00000210768 892 ntTSL 3 BASIC6.43□□□□□ -1.38
Msh4Q99MT2 Gm6980-201ENSMUST00000214327 1003 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Msh4Q99MT2 Olfr108-202ENSMUST00000218675 1038 ntAPPRIS P2 BASIC6.43□□□□□ -1.38
Msh4Q99MT2 CT030657.2-201ENSMUST00000220710 792 ntTSL 5 BASIC6.43□□□□□ -1.38
Msh4Q99MT2 AC134254.4-201ENSMUST00000223086 370 ntBASIC6.43□□□□□ -1.38
Msh4Q99MT2 AC138329.1-201ENSMUST00000225040 471 ntBASIC6.43□□□□□ -1.38
Msh4Q99MT2 AC157572.1-201ENSMUST00000227187 825 ntBASIC6.43□□□□□ -1.38
Msh4Q99MT2 AC154640.1-202ENSMUST00000227828 496 ntBASIC6.43□□□□□ -1.38
Msh4Q99MT2 AC123917.1-201ENSMUST00000228063 1048 ntBASIC6.43□□□□□ -1.38
Msh4Q99MT2 Zfp982-201ENSMUST00000063704 1244 ntAPPRIS P1 TSL 3 BASIC6.43□□□□□ -1.38
Msh4Q99MT2 Olfr1501-201ENSMUST00000073966 948 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
Msh4Q99MT2 Olfr108-201ENSMUST00000078207 1038 ntAPPRIS ALT2 BASIC6.43□□□□□ -1.38
Msh4Q99MT2 Nme5-201ENSMUST00000079287 843 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Msh4Q99MT2 Olfr688-201ENSMUST00000098155 966 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
Msh4Q99MT2 Pja2-202ENSMUST00000024889 4345 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
Msh4Q99MT2 Gm45297-201ENSMUST00000209893 3483 ntBASIC6.43□□□□□ -1.38
Msh4Q99MT2 Olfr904-202ENSMUST00000216724 5197 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
Msh4Q99MT2 Kpna2-201ENSMUST00000018506 2054 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Msh4Q99MT2 AC122263.1-201ENSMUST00000228636 2805 ntBASIC6.43□□□□□ -1.38
Msh4Q99MT2 Ptpra-202ENSMUST00000077303 3066 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Msh4Q99MT2 Kcnmb2-205ENSMUST00000192429 2357 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
Msh4Q99MT2 AC107742.1-201ENSMUST00000227769 1390 ntBASIC6.43□□□□□ -1.38
Msh4Q99MT2 Lpin2-203ENSMUST00000126681 4167 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Msh4Q99MT2 2610001J05Rik-201ENSMUST00000139231 3177 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Msh4Q99MT2 Gm28431-201ENSMUST00000185592 2166 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Msh4Q99MT2 Gm28681-201ENSMUST00000187387 2166 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Msh4Q99MT2 Dsg1b-201ENSMUST00000076737 3965 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Msh4Q99MT2 Smim15-201ENSMUST00000095458 1918 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Msh4Q99MT2 AC152946.1-201ENSMUST00000218446 3474 ntTSL 5 BASIC6.42□□□□□ -1.38
Msh4Q99MT2 Zfp352-201ENSMUST00000080541 1656 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
Msh4Q99MT2 Gm6710-201ENSMUST00000109011 1445 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Msh4Q99MT2 Olfr701-202ENSMUST00000166880 1444 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Msh4Q99MT2 Gm19667-201ENSMUST00000188984 3334 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Msh4Q99MT2 Zscan4d-201ENSMUST00000067210 2272 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Msh4Q99MT2 Atf7-211ENSMUST00000184906 1457 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Msh4Q99MT2 Olfr1390-202ENSMUST00000215014 2875 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Msh4Q99MT2 Trp63-208ENSMUST00000115310 5366 ntAPPRIS ALT1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Msh4Q99MT2 Rrh-201ENSMUST00000029648 1506 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
Msh4Q99MT2 Efcab14-201ENSMUST00000074425 4300 ntAPPRIS P2 TSL 1 (best) BASIC6.42□□□□□ -1.38
Msh4Q99MT2 Zfp317-203ENSMUST00000213725 2354 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Msh4Q99MT2 Sorbs2-209ENSMUST00000132139 4644 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
Msh4Q99MT2 Xrn1-201ENSMUST00000034981 5499 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
Msh4Q99MT2 Gm16073-201ENSMUST00000116032 517 ntBASIC6.42□□□□□ -1.38
Msh4Q99MT2 Snord88a-201ENSMUST00000116723 90 ntBASIC6.42□□□□□ -1.38
Msh4Q99MT2 Gm14863-201ENSMUST00000119648 307 ntBASIC6.42□□□□□ -1.38
Msh4Q99MT2 Gm15311-201ENSMUST00000119682 282 ntBASIC6.42□□□□□ -1.38
Msh4Q99MT2 Mgst1-204ENSMUST00000120302 559 ntAPPRIS P1 TSL 3 BASIC6.42□□□□□ -1.38
Msh4Q99MT2 Gm15305-201ENSMUST00000120354 288 ntBASIC6.42□□□□□ -1.38
Msh4Q99MT2 Gm11553-201ENSMUST00000120682 240 ntBASIC6.42□□□□□ -1.38
Msh4Q99MT2 4930412F09Rik-201ENSMUST00000139006 1017 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Msh4Q99MT2 Gm15564-201ENSMUST00000144134 545 ntTSL 3 BASIC6.42□□□□□ -1.38
Msh4Q99MT2 Gm25722-201ENSMUST00000157498 279 ntBASIC6.42□□□□□ -1.38
Msh4Q99MT2 Gm21970-201ENSMUST00000160764 884 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Msh4Q99MT2 Gm17091-201ENSMUST00000163248 357 ntBASIC6.42□□□□□ -1.38
Msh4Q99MT2 Vmn2r-ps86-201ENSMUST00000174812 871 ntBASIC6.42□□□□□ -1.38
Msh4Q99MT2 Gm23810-201ENSMUST00000175150 74 ntBASIC6.42□□□□□ -1.38
Msh4Q99MT2 Gm22990-201ENSMUST00000175427 89 ntBASIC6.42□□□□□ -1.38
Msh4Q99MT2 Gm18595-201ENSMUST00000175736 1068 ntBASIC6.42□□□□□ -1.38
Msh4Q99MT2 Gm3307-201ENSMUST00000176164 632 ntBASIC6.42□□□□□ -1.38
Msh4Q99MT2 Gm24300-201ENSMUST00000177809 109 ntBASIC6.42□□□□□ -1.38
Msh4Q99MT2 Gm24017-201ENSMUST00000178726 109 ntBASIC6.42□□□□□ -1.38
Msh4Q99MT2 Gm23952-201ENSMUST00000179380 109 ntBASIC6.42□□□□□ -1.38
Msh4Q99MT2 Crnde-205ENSMUST00000179400 651 ntTSL 2 BASIC6.42□□□□□ -1.38
Msh4Q99MT2 B230110G15Rik-201ENSMUST00000190868 772 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Msh4Q99MT2 1700102P08Rik-202ENSMUST00000192995 658 ntTSL 3 BASIC6.42□□□□□ -1.38
Msh4Q99MT2 4930590H14Rik-201ENSMUST00000193999 551 ntBASIC6.42□□□□□ -1.38
Msh4Q99MT2 Gm7019-201ENSMUST00000194122 369 ntBASIC6.42□□□□□ -1.38
Msh4Q99MT2 9430087B13Rik-201ENSMUST00000196548 1085 ntBASIC6.42□□□□□ -1.38
Msh4Q99MT2 Gm18012-201ENSMUST00000204558 773 ntBASIC6.42□□□□□ -1.38
Msh4Q99MT2 Gm44869-201ENSMUST00000208836 357 ntBASIC6.42□□□□□ -1.38
Msh4Q99MT2 Olfr44-203ENSMUST00000216316 1078 ntAPPRIS ALT2 TSL 3 BASIC6.42□□□□□ -1.38
Msh4Q99MT2 Gm36278-201ENSMUST00000217030 918 ntTSL 5 BASIC6.42□□□□□ -1.38
Msh4Q99MT2 AC154558.1-201ENSMUST00000222278 415 ntBASIC6.42□□□□□ -1.38
Msh4Q99MT2 AC150661.1-201ENSMUST00000222563 495 ntBASIC6.42□□□□□ -1.38
Msh4Q99MT2 Gm5374-202ENSMUST00000222910 314 ntBASIC6.42□□□□□ -1.38
Msh4Q99MT2 Hspe1-ps1-201ENSMUST00000222955 330 ntBASIC6.42□□□□□ -1.38
Msh4Q99MT2 CT009527.2-201ENSMUST00000225386 606 ntBASIC6.42□□□□□ -1.38
Msh4Q99MT2 Olfr147-201ENSMUST00000056364 1166 ntAPPRIS P2 TSL 2 BASIC6.42□□□□□ -1.38
Msh4Q99MT2 Olfr44-201ENSMUST00000077757 1071 ntAPPRIS P2 TSL 3 BASIC6.42□□□□□ -1.38
Msh4Q99MT2 Gm10108-201ENSMUST00000078246 319 ntBASIC6.42□□□□□ -1.38
Msh4Q99MT2 Olfr1510-201ENSMUST00000079459 1014 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
Msh4Q99MT2 n-R5s95-201ENSMUST00000082684 118 ntBASIC6.42□□□□□ -1.38
Msh4Q99MT2 Rhox3h-201ENSMUST00000096457 1053 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Msh4Q99MT2 Pde7a-201ENSMUST00000091314 4454 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 95 ms