Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 Sbp-206ENSMUST00000183155 882 ntAPPRIS P1 TSL 2 BASIC6.84□□□□□ -1.31
CopaQ8CIE6 Trav1-202ENSMUST00000185651 329 ntAPPRIS ALT2 BASIC6.84□□□□□ -1.31
CopaQ8CIE6 Gm29588-201ENSMUST00000185738 298 ntBASIC6.84□□□□□ -1.31
CopaQ8CIE6 1700020M21Rik-201ENSMUST00000188320 644 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
CopaQ8CIE6 4930566N20Rik-201ENSMUST00000195173 1199 ntBASIC6.84□□□□□ -1.31
CopaQ8CIE6 Gm42912-201ENSMUST00000197195 716 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
CopaQ8CIE6 Gm4410-201ENSMUST00000199349 686 ntBASIC6.84□□□□□ -1.31
CopaQ8CIE6 Gm4751-201ENSMUST00000200620 1105 ntBASIC6.84□□□□□ -1.31
CopaQ8CIE6 Gm30708-201ENSMUST00000202183 312 ntBASIC6.84□□□□□ -1.31
CopaQ8CIE6 Gm7351-201ENSMUST00000210745 580 ntBASIC6.84□□□□□ -1.31
CopaQ8CIE6 Olfr44-203ENSMUST00000216316 1078 ntAPPRIS ALT2 TSL 3 BASIC6.84□□□□□ -1.31
CopaQ8CIE6 AC147615.1-201ENSMUST00000218914 441 ntBASIC6.84□□□□□ -1.31
CopaQ8CIE6 CT009742.1-201ENSMUST00000222507 702 ntBASIC6.84□□□□□ -1.31
CopaQ8CIE6 Gm17872-201ENSMUST00000222550 532 ntBASIC6.84□□□□□ -1.31
CopaQ8CIE6 AC164436.1-201ENSMUST00000227074 772 ntBASIC6.84□□□□□ -1.31
CopaQ8CIE6 Sbpl-201ENSMUST00000024939 870 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
CopaQ8CIE6 Olfr19-201ENSMUST00000057886 1142 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
CopaQ8CIE6 Olfr1386-201ENSMUST00000071905 1128 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
CopaQ8CIE6 Scimp-201ENSMUST00000074572 617 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
CopaQ8CIE6 Vmn1r40-201ENSMUST00000075158 933 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
CopaQ8CIE6 Olfr44-201ENSMUST00000077757 1071 ntAPPRIS P2 TSL 3 BASIC6.84□□□□□ -1.31
CopaQ8CIE6 n-R5s217-201ENSMUST00000083341 116 ntBASIC6.84□□□□□ -1.31
CopaQ8CIE6 Mir106b-201ENSMUST00000083580 82 ntBASIC6.84□□□□□ -1.31
CopaQ8CIE6 Mir296-201ENSMUST00000083587 79 ntBASIC6.84□□□□□ -1.31
CopaQ8CIE6 Il4-201ENSMUST00000000889 590 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
CopaQ8CIE6 Ssxb5-201ENSMUST00000089370 602 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
CopaQ8CIE6 Vmn1r44-210ENSMUST00000227747 1811 ntBASIC6.84□□□□□ -1.31
CopaQ8CIE6 Olfr1338-202ENSMUST00000214922 2947 ntAPPRIS ALT1 TSL 5 BASIC6.84□□□□□ -1.31
CopaQ8CIE6 Gm29017-201ENSMUST00000190598 2092 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
CopaQ8CIE6 Clcn5-201ENSMUST00000004428 8390 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
CopaQ8CIE6 Bbx-201ENSMUST00000066037 4523 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
CopaQ8CIE6 Zfp462-203ENSMUST00000098070 10465 ntAPPRIS P2 TSL 5 BASIC6.84□□□□□ -1.31
CopaQ8CIE6 Casp4-201ENSMUST00000027012 1435 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.32
CopaQ8CIE6 AI838599-201ENSMUST00000133960 2953 ntTSL 1 (best) BASIC6.84□□□□□ -1.32
CopaQ8CIE6 Tor1aip1-210ENSMUST00000169241 3716 ntAPPRIS ALT2 TSL 3 BASIC6.84□□□□□ -1.32
CopaQ8CIE6 Tpx2-207ENSMUST00000178997 4161 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
CopaQ8CIE6 Scn1a-201ENSMUST00000077489 8116 ntAPPRIS P3 TSL 5 BASIC6.83□□□□□ -1.32
CopaQ8CIE6 Dlgap5-208ENSMUST00000180299 4067 ntAPPRIS ALT2 TSL 2 BASIC6.83□□□□□ -1.32
CopaQ8CIE6 Gm13057-201ENSMUST00000105776 2093 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
CopaQ8CIE6 Gm18248-201ENSMUST00000191164 1846 ntBASIC6.83□□□□□ -1.32
CopaQ8CIE6 Gm5157-201ENSMUST00000185914 1581 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
CopaQ8CIE6 CAAA01119292.1-201ENSMUST00000226763 2766 ntBASIC6.83□□□□□ -1.32
CopaQ8CIE6 Ankrd17-205ENSMUST00000197021 8067 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
CopaQ8CIE6 Nfib-201ENSMUST00000050872 8770 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
CopaQ8CIE6 Gtpbp4-204ENSMUST00000222098 8783 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
CopaQ8CIE6 Mir678-201ENSMUST00000102114 84 ntBASIC6.83□□□□□ -1.32
CopaQ8CIE6 Amelx-202ENSMUST00000112118 799 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
CopaQ8CIE6 Cldn34d-201ENSMUST00000114054 1003 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
CopaQ8CIE6 Gm12939-201ENSMUST00000117303 165 ntBASIC6.83□□□□□ -1.32
CopaQ8CIE6 Gm12653-201ENSMUST00000117778 561 ntBASIC6.83□□□□□ -1.32
CopaQ8CIE6 Gm12573-201ENSMUST00000118158 286 ntBASIC6.83□□□□□ -1.32
CopaQ8CIE6 BB218582-201ENSMUST00000123623 1024 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
CopaQ8CIE6 Gm14095-201ENSMUST00000134264 516 ntTSL 3 BASIC6.83□□□□□ -1.32
CopaQ8CIE6 Gm4202-201ENSMUST00000169025 733 ntBASIC6.83□□□□□ -1.32
CopaQ8CIE6 Znrf1-215ENSMUST00000174454 494 ntTSL 3 BASIC6.83□□□□□ -1.32
CopaQ8CIE6 Gm3650-201ENSMUST00000180600 747 ntBASIC6.83□□□□□ -1.32
CopaQ8CIE6 Gm27186-201ENSMUST00000184223 307 ntBASIC6.83□□□□□ -1.32
CopaQ8CIE6 Gm37190-201ENSMUST00000193580 688 ntTSL 5 BASIC6.83□□□□□ -1.32
CopaQ8CIE6 Ighv8-3-201ENSMUST00000194985 295 ntBASIC6.83□□□□□ -1.32
CopaQ8CIE6 Gm43400-201ENSMUST00000197294 1254 ntTSL 5 BASIC6.83□□□□□ -1.32
CopaQ8CIE6 Gm7452-201ENSMUST00000200764 788 ntBASIC6.83□□□□□ -1.32
CopaQ8CIE6 Mrln-201ENSMUST00000020090 443 ntAPPRIS P1 TSL 2 BASIC6.83□□□□□ -1.32
CopaQ8CIE6 Gm19590-201ENSMUST00000201551 1195 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
CopaQ8CIE6 Gm43772-201ENSMUST00000202052 379 ntBASIC6.83□□□□□ -1.32
CopaQ8CIE6 Ndufa4-204ENSMUST00000204714 452 ntAPPRIS P1 TSL 3 BASIC6.83□□□□□ -1.32
CopaQ8CIE6 Rpl19-ps9-201ENSMUST00000205423 588 ntBASIC6.83□□□□□ -1.32
CopaQ8CIE6 1810049I09Rik-202ENSMUST00000206760 556 ntBASIC6.83□□□□□ -1.32
CopaQ8CIE6 Gm31036-201ENSMUST00000212925 521 ntTSL 3 BASIC6.83□□□□□ -1.32
CopaQ8CIE6 CAAA01216754.4-201ENSMUST00000216416 802 ntTSL 5 BASIC6.83□□□□□ -1.32
CopaQ8CIE6 Gm36278-201ENSMUST00000217030 918 ntTSL 5 BASIC6.83□□□□□ -1.32
CopaQ8CIE6 CAAA01216754.4-203ENSMUST00000217178 1097 ntTSL 5 BASIC6.83□□□□□ -1.32
CopaQ8CIE6 AC165260.4-201ENSMUST00000225924 724 ntBASIC6.83□□□□□ -1.32
CopaQ8CIE6 AC140288.1-201ENSMUST00000226329 503 ntBASIC6.83□□□□□ -1.32
CopaQ8CIE6 CT010577.1-202ENSMUST00000226187 1903 ntBASIC6.83□□□□□ -1.32
CopaQ8CIE6 A730020M07Rik-202ENSMUST00000196621 2370 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
CopaQ8CIE6 Gm11541-201ENSMUST00000069852 1681 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
CopaQ8CIE6 Meg3-209ENSMUST00000146701 14548 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
CopaQ8CIE6 CT025619.1-201ENSMUST00000214294 2331 ntTSL 5 BASIC6.83□□□□□ -1.32
CopaQ8CIE6 Taf1-201ENSMUST00000101341 8054 ntAPPRIS ALT2 TSL 2 BASIC6.83□□□□□ -1.32
CopaQ8CIE6 Dennd1b-201ENSMUST00000094505 8073 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
CopaQ8CIE6 Mbnl2-202ENSMUST00000167459 4534 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
CopaQ8CIE6 Tlr4-202ENSMUST00000107365 1866 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
CopaQ8CIE6 Gm37033-201ENSMUST00000193199 7350 ntBASIC6.83□□□□□ -1.32
CopaQ8CIE6 Gm13749-201ENSMUST00000133244 1432 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
CopaQ8CIE6 Galnt5-203ENSMUST00000166729 3812 ntAPPRIS P1 TSL 2 BASIC6.83□□□□□ -1.32
CopaQ8CIE6 Stk3-205ENSMUST00000226555 2730 ntAPPRIS ALT2 BASIC6.83□□□□□ -1.32
CopaQ8CIE6 Wdr12-201ENSMUST00000027173 10012 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
CopaQ8CIE6 Olfr1047-202ENSMUST00000216056 2450 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
CopaQ8CIE6 Gm37967-201ENSMUST00000195634 2665 ntBASIC6.83□□□□□ -1.32
CopaQ8CIE6 Synb-201ENSMUST00000059362 4055 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
CopaQ8CIE6 Xcr1-201ENSMUST00000182350 4453 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
CopaQ8CIE6 1700014D04Rik-203ENSMUST00000180139 3231 ntAPPRIS P1 TSL 2 BASIC6.82□□□□□ -1.32
CopaQ8CIE6 Rc3h2-201ENSMUST00000100143 8799 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
CopaQ8CIE6 Zfp937-201ENSMUST00000073782 2797 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
CopaQ8CIE6 Tinag-201ENSMUST00000034911 1726 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
CopaQ8CIE6 Kpna2-201ENSMUST00000018506 2054 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
CopaQ8CIE6 Cd209d-201ENSMUST00000011445 919 ntAPPRIS P2 TSL 1 (best) BASIC6.82□□□□□ -1.32
CopaQ8CIE6 Gm16073-201ENSMUST00000116032 517 ntBASIC6.82□□□□□ -1.32
CopaQ8CIE6 Gm14550-201ENSMUST00000117918 407 ntBASIC6.82□□□□□ -1.32
CopaQ8CIE6 Gm11501-201ENSMUST00000118039 581 ntBASIC6.82□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 86.2 ms