Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Klrc1-203ENSMUST00000118447 684 ntAPPRIS P3 TSL 1 (best) BASIC7.15□□□□□ -1.26
Trim9Q8C7M3 Gm5601-201ENSMUST00000118909 972 ntBASIC7.15□□□□□ -1.26
Trim9Q8C7M3 Gm22276-201ENSMUST00000122469 129 ntBASIC7.15□□□□□ -1.26
Trim9Q8C7M3 0610043K17Rik-201ENSMUST00000123107 614 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Trim9Q8C7M3 1700054M17Rik-201ENSMUST00000125654 445 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Trim9Q8C7M3 Gm15879-202ENSMUST00000150906 565 ntTSL 2 BASIC7.15□□□□□ -1.26
Trim9Q8C7M3 Gm5277-201ENSMUST00000164923 556 ntBASIC7.15□□□□□ -1.26
Trim9Q8C7M3 1110038B12Rik-201ENSMUST00000172501 579 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Trim9Q8C7M3 Gm28721-201ENSMUST00000187649 918 ntTSL 3 BASIC7.15□□□□□ -1.26
Trim9Q8C7M3 Gm7019-201ENSMUST00000194122 369 ntBASIC7.15□□□□□ -1.26
Trim9Q8C7M3 Gm5853-201ENSMUST00000197183 632 ntBASIC7.15□□□□□ -1.26
Trim9Q8C7M3 Gm43063-201ENSMUST00000198198 1081 ntBASIC7.15□□□□□ -1.26
Trim9Q8C7M3 Olfr1473-ps1-201ENSMUST00000207135 958 ntBASIC7.15□□□□□ -1.26
Trim9Q8C7M3 Gm45064-201ENSMUST00000208619 443 ntTSL 5 BASIC7.15□□□□□ -1.26
Trim9Q8C7M3 Olfr489-ps1-201ENSMUST00000210404 967 ntBASIC7.15□□□□□ -1.26
Trim9Q8C7M3 Olfr291-201ENSMUST00000211582 1159 ntAPPRIS P2 TSL 2 BASIC7.15□□□□□ -1.26
Trim9Q8C7M3 Gm7769-201ENSMUST00000212900 933 ntBASIC7.15□□□□□ -1.26
Trim9Q8C7M3 Olfr976-203ENSMUST00000217360 1164 ntAPPRIS ALT2 BASIC7.15□□□□□ -1.26
Trim9Q8C7M3 Gm40932-202ENSMUST00000221315 511 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Trim9Q8C7M3 AC135292.2-201ENSMUST00000227559 367 ntBASIC7.15□□□□□ -1.26
Trim9Q8C7M3 AC153729.1-201ENSMUST00000214055 2562 ntBASIC7.15□□□□□ -1.26
Trim9Q8C7M3 Gm37967-201ENSMUST00000195634 2665 ntBASIC7.15□□□□□ -1.26
Trim9Q8C7M3 Trpm3-202ENSMUST00000074770 6710 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.26
Trim9Q8C7M3 AC107742.1-201ENSMUST00000227769 1390 ntBASIC7.15□□□□□ -1.26
Trim9Q8C7M3 A430110C17Rik-201ENSMUST00000195666 4348 ntBASIC7.15□□□□□ -1.27
Trim9Q8C7M3 Zfp619-201ENSMUST00000108015 5969 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
Trim9Q8C7M3 Nsun6-202ENSMUST00000076435 3042 ntAPPRIS P3 TSL 1 (best) BASIC7.15□□□□□ -1.27
Trim9Q8C7M3 Mbnl3-204ENSMUST00000136404 1632 ntAPPRIS ALT2 TSL 5 BASIC7.15□□□□□ -1.27
Trim9Q8C7M3 Itpr1-205ENSMUST00000203615 9761 ntAPPRIS ALT2 TSL 5 BASIC7.15□□□□□ -1.27
Trim9Q8C7M3 Zfa-ps-202ENSMUST00000180673 3420 ntBASIC7.15□□□□□ -1.27
Trim9Q8C7M3 Gm38697-201ENSMUST00000198061 1746 ntBASIC7.15□□□□□ -1.27
Trim9Q8C7M3 Smarca2-246ENSMUST00000209085 1841 ntTSL 5 BASIC7.15□□□□□ -1.27
Trim9Q8C7M3 Gm3139-203ENSMUST00000202642 2048 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
Trim9Q8C7M3 Zscan4d-201ENSMUST00000067210 2272 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
Trim9Q8C7M3 Snx10-207ENSMUST00000179365 2464 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
Trim9Q8C7M3 Gm37913-201ENSMUST00000192925 2544 ntBASIC7.15□□□□□ -1.27
Trim9Q8C7M3 A930017M01Rik-201ENSMUST00000081361 2884 ntBASIC7.14□□□□□ -1.27
Trim9Q8C7M3 9430098F02Rik-201ENSMUST00000180832 2986 ntTSL 5 BASIC7.14□□□□□ -1.27
Trim9Q8C7M3 Rfx3-201ENSMUST00000046898 4274 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Trim9Q8C7M3 Hormad1-203ENSMUST00000107154 1444 ntAPPRIS P3 TSL 1 (best) BASIC7.14□□□□□ -1.27
Trim9Q8C7M3 Gm21103-201ENSMUST00000112737 984 ntAPPRIS ALT2 TSL 5 BASIC7.14□□□□□ -1.27
Trim9Q8C7M3 Gm13768-201ENSMUST00000116469 929 ntBASIC7.14□□□□□ -1.27
Trim9Q8C7M3 St18-204ENSMUST00000131494 5720 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Trim9Q8C7M3 Gm16152-201ENSMUST00000131663 872 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Trim9Q8C7M3 Ralgapa2-205ENSMUST00000131824 5624 ntAPPRIS ALT2 TSL 5 BASIC7.14□□□□□ -1.27
Trim9Q8C7M3 Gm15122-201ENSMUST00000135434 462 ntTSL 2 BASIC7.14□□□□□ -1.27
Trim9Q8C7M3 Gm7982-202ENSMUST00000136313 1536 ntAPPRIS P5 TSL 5 BASIC7.14□□□□□ -1.27
Trim9Q8C7M3 Sp3os-203ENSMUST00000137941 628 ntTSL 2 BASIC7.14□□□□□ -1.27
Trim9Q8C7M3 Gm13963-201ENSMUST00000143525 892 ntTSL 3 BASIC7.14□□□□□ -1.27
Trim9Q8C7M3 4933411O13Rik-203ENSMUST00000146849 607 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Trim9Q8C7M3 Gm11963-201ENSMUST00000149826 500 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Trim9Q8C7M3 Ampd1-202ENSMUST00000155034 2913 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Trim9Q8C7M3 Prkg2-204ENSMUST00000162147 1389 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Trim9Q8C7M3 Gm3140-201ENSMUST00000163523 481 ntBASIC7.14□□□□□ -1.27
Trim9Q8C7M3 Gm6611-201ENSMUST00000163830 1272 ntBASIC7.14□□□□□ -1.27
Trim9Q8C7M3 Gm3047-201ENSMUST00000164069 822 ntAPPRIS P5 TSL 5 BASIC7.14□□□□□ -1.27
Trim9Q8C7M3 Gm3029-201ENSMUST00000168306 984 ntAPPRIS P5 TSL 5 BASIC7.14□□□□□ -1.27
Trim9Q8C7M3 Pantr1-203ENSMUST00000176154 514 ntTSL 5 BASIC7.14□□□□□ -1.27
Trim9Q8C7M3 Gm29529-201ENSMUST00000187154 714 ntTSL 3 BASIC7.14□□□□□ -1.27
Trim9Q8C7M3 Gm29650-201ENSMUST00000188485 742 ntBASIC7.14□□□□□ -1.27
Trim9Q8C7M3 Gm37103-201ENSMUST00000191830 115 ntBASIC7.14□□□□□ -1.27
Trim9Q8C7M3 Gm37751-201ENSMUST00000192440 1198 ntBASIC7.14□□□□□ -1.27
Trim9Q8C7M3 Gm37082-201ENSMUST00000192629 1927 ntBASIC7.14□□□□□ -1.27
Trim9Q8C7M3 Gm26801-202ENSMUST00000193187 610 ntTSL 3 BASIC7.14□□□□□ -1.27
Trim9Q8C7M3 Gm43707-201ENSMUST00000196451 3187 ntBASIC7.14□□□□□ -1.27
Trim9Q8C7M3 Gm43538-201ENSMUST00000200416 849 ntTSL 3 BASIC7.14□□□□□ -1.27
Trim9Q8C7M3 Gm32005-201ENSMUST00000212446 959 ntTSL 5 BASIC7.14□□□□□ -1.27
Trim9Q8C7M3 E130101E03Rik-201ENSMUST00000214469 1163 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Trim9Q8C7M3 Olfr1233-204ENSMUST00000216561 1192 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
Trim9Q8C7M3 Olfr961-202ENSMUST00000219295 3374 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
Trim9Q8C7M3 AC108401.2-201ENSMUST00000220316 346 ntTSL 3 BASIC7.14□□□□□ -1.27
Trim9Q8C7M3 AC107663.1-201ENSMUST00000224257 468 ntBASIC7.14□□□□□ -1.27
Trim9Q8C7M3 AC102676.1-201ENSMUST00000228131 719 ntBASIC7.14□□□□□ -1.27
Trim9Q8C7M3 Nup43-201ENSMUST00000040135 1286 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Trim9Q8C7M3 Olfr1510-201ENSMUST00000079459 1014 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
Trim9Q8C7M3 Gm6419-201ENSMUST00000097166 429 ntBASIC7.14□□□□□ -1.27
Trim9Q8C7M3 Mapk10-201ENSMUST00000086854 6630 ntAPPRIS ALT1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Trim9Q8C7M3 Vmn1r86-203ENSMUST00000227220 6445 ntAPPRIS P2 BASIC7.14□□□□□ -1.27
Trim9Q8C7M3 Mum1l1-202ENSMUST00000113042 4182 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
Trim9Q8C7M3 Ntrk3-202ENSMUST00000039438 3977 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Trim9Q8C7M3 D930016D06Rik-202ENSMUST00000181620 3805 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Trim9Q8C7M3 Gm29825-201ENSMUST00000214237 3775 ntTSL 5 BASIC7.14□□□□□ -1.27
Trim9Q8C7M3 Myt1l-202ENSMUST00000049784 7202 ntAPPRIS P4 TSL 1 (best) BASIC7.14□□□□□ -1.27
Trim9Q8C7M3 Angptl1-201ENSMUST00000027885 2651 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Trim9Q8C7M3 Mapk10-205ENSMUST00000128869 2518 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Trim9Q8C7M3 Cntn1-202ENSMUST00000068378 3964 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Trim9Q8C7M3 Gm12763-201ENSMUST00000151344 1939 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Trim9Q8C7M3 Gm43031-201ENSMUST00000198500 1887 ntBASIC7.13□□□□□ -1.27
Trim9Q8C7M3 Eaf2-202ENSMUST00000075946 1878 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Trim9Q8C7M3 Efcab7-201ENSMUST00000097959 1713 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
Trim9Q8C7M3 Olfr859-202ENSMUST00000212540 9532 ntAPPRIS P1 TSL 3 BASIC7.13□□□□□ -1.27
Trim9Q8C7M3 A2m-201ENSMUST00000032203 4605 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Trim9Q8C7M3 Gm29398-201ENSMUST00000186355 1491 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Trim9Q8C7M3 Gm42975-201ENSMUST00000200612 1491 ntBASIC7.13□□□□□ -1.27
Trim9Q8C7M3 Obox2-201ENSMUST00000036575 1459 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Trim9Q8C7M3 Ncr1-201ENSMUST00000006792 1463 ntAPPRIS P2 TSL 1 (best) BASIC7.13□□□□□ -1.27
Trim9Q8C7M3 Gm14976-201ENSMUST00000117055 1394 ntBASIC7.13□□□□□ -1.27
Trim9Q8C7M3 Serpinb6c-201ENSMUST00000110273 1325 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
Trim9Q8C7M3 4933405O20Rik-201ENSMUST00000119710 1341 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
Trim9Q8C7M3 S100a1-202ENSMUST00000107340 577 ntTSL 2 BASIC7.13□□□□□ -1.27
Retrieved 100 of 76,532 protein–RNA pairs in 79.5 ms