Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Ggta1-204ENSMUST00000113001 3340 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
Pcdh19Q80TF3 Gm13058-201ENSMUST00000117097 1435 ntBASIC7.3□□□□□ -1.24
Pcdh19Q80TF3 Gm13106-201ENSMUST00000119045 1443 ntBASIC7.3□□□□□ -1.24
Pcdh19Q80TF3 Gm6249-201ENSMUST00000211142 3314 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Pcdh19Q80TF3 Wdr7-201ENSMUST00000072726 7109 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Pcdh19Q80TF3 Pan2-203ENSMUST00000218315 4379 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
Pcdh19Q80TF3 Olfr1278-205ENSMUST00000215210 6901 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
Pcdh19Q80TF3 Mpzl3-203ENSMUST00000114664 3424 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Pcdh19Q80TF3 A730036I17Rik-201ENSMUST00000143346 3431 ntTSL 2 BASIC7.3□□□□□ -1.24
Pcdh19Q80TF3 Gm6913-201ENSMUST00000100019 348 ntBASIC7.3□□□□□ -1.24
Pcdh19Q80TF3 Btf3l4-202ENSMUST00000102740 624 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
Pcdh19Q80TF3 Gm25757-201ENSMUST00000103986 123 ntBASIC7.3□□□□□ -1.24
Pcdh19Q80TF3 Snord70-201ENSMUST00000104157 87 ntBASIC7.3□□□□□ -1.24
Pcdh19Q80TF3 Apoa2-202ENSMUST00000111319 458 ntAPPRIS P1 TSL 3 BASIC7.3□□□□□ -1.24
Pcdh19Q80TF3 Gm13414-201ENSMUST00000117516 727 ntBASIC7.3□□□□□ -1.24
Pcdh19Q80TF3 Gm14007-201ENSMUST00000118288 210 ntBASIC7.3□□□□□ -1.24
Pcdh19Q80TF3 Gm12375-201ENSMUST00000119331 921 ntBASIC7.3□□□□□ -1.24
Pcdh19Q80TF3 Gm12844-201ENSMUST00000119463 582 ntBASIC7.3□□□□□ -1.24
Pcdh19Q80TF3 Gm13224-201ENSMUST00000119586 94 ntBASIC7.3□□□□□ -1.24
Pcdh19Q80TF3 Gm12243-201ENSMUST00000128521 821 ntTSL 3 BASIC7.3□□□□□ -1.24
Pcdh19Q80TF3 Crem-219ENSMUST00000140332 1015 ntTSL 5 BASIC7.3□□□□□ -1.24
Pcdh19Q80TF3 Gm14651-201ENSMUST00000147192 442 ntBASIC7.3□□□□□ -1.24
Pcdh19Q80TF3 Gm10552-202ENSMUST00000161763 717 ntTSL 5 BASIC7.3□□□□□ -1.24
Pcdh19Q80TF3 Gm18560-201ENSMUST00000173463 1123 ntBASIC7.3□□□□□ -1.24
Pcdh19Q80TF3 Cbx3-ps6-201ENSMUST00000181108 552 ntBASIC7.3□□□□□ -1.24
Pcdh19Q80TF3 4933440J02Rik-201ENSMUST00000181547 1144 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Pcdh19Q80TF3 Gm9381-201ENSMUST00000182285 1012 ntBASIC7.3□□□□□ -1.24
Pcdh19Q80TF3 Gm9745-202ENSMUST00000187196 858 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Pcdh19Q80TF3 Gm29496-201ENSMUST00000189854 693 ntBASIC7.3□□□□□ -1.24
Pcdh19Q80TF3 Gm37383-201ENSMUST00000191750 745 ntBASIC7.3□□□□□ -1.24
Pcdh19Q80TF3 1700006P03Rik-201ENSMUST00000191810 409 ntBASIC7.3□□□□□ -1.24
Pcdh19Q80TF3 Gm43308-201ENSMUST00000197236 373 ntBASIC7.3□□□□□ -1.24
Pcdh19Q80TF3 Gm44003-201ENSMUST00000203024 490 ntBASIC7.3□□□□□ -1.24
Pcdh19Q80TF3 Clec2f-202ENSMUST00000204981 657 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Pcdh19Q80TF3 Gm34549-202ENSMUST00000207356 970 ntTSL 5 BASIC7.3□□□□□ -1.24
Pcdh19Q80TF3 Gm45446-201ENSMUST00000209348 216 ntBASIC7.3□□□□□ -1.24
Pcdh19Q80TF3 Olfr529-ps1-201ENSMUST00000211097 928 ntBASIC7.3□□□□□ -1.24
Pcdh19Q80TF3 Olfr976-203ENSMUST00000217360 1164 ntAPPRIS ALT2 BASIC7.3□□□□□ -1.24
Pcdh19Q80TF3 AC155929.4-201ENSMUST00000218493 491 ntTSL 3 BASIC7.3□□□□□ -1.24
Pcdh19Q80TF3 AC125020.2-201ENSMUST00000218894 348 ntBASIC7.3□□□□□ -1.24
Pcdh19Q80TF3 Gm46312-201ENSMUST00000220961 420 ntBASIC7.3□□□□□ -1.24
Pcdh19Q80TF3 AC134468.2-202ENSMUST00000222820 1120 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Pcdh19Q80TF3 Gnrh1-202ENSMUST00000223929 428 ntBASIC7.3□□□□□ -1.24
Pcdh19Q80TF3 AC122290.1-201ENSMUST00000225631 1078 ntBASIC7.3□□□□□ -1.24
Pcdh19Q80TF3 Crem-202ENSMUST00000049942 953 ntTSL 2 BASIC7.3□□□□□ -1.24
Pcdh19Q80TF3 Spink14-201ENSMUST00000060328 566 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
Pcdh19Q80TF3 Gm17728-201ENSMUST00000076982 399 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
Pcdh19Q80TF3 Olfr1383-201ENSMUST00000077143 940 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
Pcdh19Q80TF3 Cbx3-ps7-201ENSMUST00000081455 552 ntBASIC7.3□□□□□ -1.24
Pcdh19Q80TF3 Gm24411-201ENSMUST00000083428 131 ntBASIC7.3□□□□□ -1.24
Pcdh19Q80TF3 Ube2c-202ENSMUST00000088248 967 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Pcdh19Q80TF3 Olfr1312-201ENSMUST00000099600 954 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
Pcdh19Q80TF3 Gm13083-201ENSMUST00000105773 2464 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
Pcdh19Q80TF3 Sema6a-206ENSMUST00000135790 4339 ntTSL 5 BASIC7.3□□□□□ -1.24
Pcdh19Q80TF3 Olfr101-202ENSMUST00000214376 2989 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
Pcdh19Q80TF3 Dalir-201ENSMUST00000188773 2170 ntBASIC7.3□□□□□ -1.24
Pcdh19Q80TF3 Gm43686-201ENSMUST00000197351 2439 ntBASIC7.3□□□□□ -1.24
Pcdh19Q80TF3 Gm43128-201ENSMUST00000202212 1621 ntBASIC7.3□□□□□ -1.24
Pcdh19Q80TF3 B830042I05Rik-201ENSMUST00000208333 1620 ntTSL 5 BASIC7.3□□□□□ -1.24
Pcdh19Q80TF3 Hmg20a-203ENSMUST00000214771 3191 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Pcdh19Q80TF3 Sh2d1b2-202ENSMUST00000162752 2542 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Pcdh19Q80TF3 Gm45262-201ENSMUST00000209917 1463 ntBASIC7.3□□□□□ -1.24
Pcdh19Q80TF3 AC151904.1-201ENSMUST00000219945 1498 ntBASIC7.3□□□□□ -1.24
Pcdh19Q80TF3 2610203C20Rik-204ENSMUST00000181214 3525 ntTSL 5 BASIC7.3□□□□□ -1.24
Pcdh19Q80TF3 Ttll4-202ENSMUST00000113678 3762 ntTSL 5 BASIC7.3□□□□□ -1.24
Pcdh19Q80TF3 Psg29-201ENSMUST00000075934 5445 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Pcdh19Q80TF3 Nipa2-203ENSMUST00000119041 2979 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
Pcdh19Q80TF3 Gm4927-201ENSMUST00000219548 1318 ntBASIC7.29□□□□□ -1.24
Pcdh19Q80TF3 Pcmtd2-201ENSMUST00000029116 3569 ntAPPRIS P3 TSL 1 (best) BASIC7.29□□□□□ -1.24
Pcdh19Q80TF3 Cd44-204ENSMUST00000111190 1412 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
Pcdh19Q80TF3 Gm20679-201ENSMUST00000177285 1402 ntBASIC7.29□□□□□ -1.24
Pcdh19Q80TF3 AC163040.2-201ENSMUST00000223462 3534 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Pcdh19Q80TF3 Olfr1426-204ENSMUST00000219005 2507 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
Pcdh19Q80TF3 Gm4319-201ENSMUST00000191139 2048 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Pcdh19Q80TF3 Spag9-203ENSMUST00000075695 6910 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Pcdh19Q80TF3 Csde1-216ENSMUST00000199571 3123 ntAPPRIS ALT2 TSL 5 BASIC7.29□□□□□ -1.24
Pcdh19Q80TF3 Gm18537-202ENSMUST00000206215 1503 ntBASIC7.29□□□□□ -1.24
Pcdh19Q80TF3 Ighv1-20-201ENSMUST00000103506 348 ntAPPRIS ALT2 BASIC7.29□□□□□ -1.24
Pcdh19Q80TF3 Ighv1-37-201ENSMUST00000103514 348 ntAPPRIS ALT2 BASIC7.29□□□□□ -1.24
Pcdh19Q80TF3 Gm25631-201ENSMUST00000104390 130 ntBASIC7.29□□□□□ -1.24
Pcdh19Q80TF3 Rpl35a-203ENSMUST00000115076 519 ntAPPRIS P1 TSL 2 BASIC7.29□□□□□ -1.24
Pcdh19Q80TF3 Gm11864-201ENSMUST00000116179 1220 ntBASIC7.29□□□□□ -1.24
Pcdh19Q80TF3 Gm14279-201ENSMUST00000117142 332 ntBASIC7.29□□□□□ -1.24
Pcdh19Q80TF3 Rpl35a-ps2-201ENSMUST00000117444 333 ntBASIC7.29□□□□□ -1.24
Pcdh19Q80TF3 Gm10243-201ENSMUST00000117571 333 ntBASIC7.29□□□□□ -1.24
Pcdh19Q80TF3 Olfr1144-ps1-201ENSMUST00000118227 328 ntBASIC7.29□□□□□ -1.24
Pcdh19Q80TF3 Gm13207-201ENSMUST00000119862 773 ntBASIC7.29□□□□□ -1.24
Pcdh19Q80TF3 Gm11371-201ENSMUST00000120294 385 ntBASIC7.29□□□□□ -1.24
Pcdh19Q80TF3 Gm12307-201ENSMUST00000120581 590 ntBASIC7.29□□□□□ -1.24
Pcdh19Q80TF3 Rpl35a-ps4-201ENSMUST00000121779 333 ntBASIC7.29□□□□□ -1.24
Pcdh19Q80TF3 Gm14411-201ENSMUST00000121798 914 ntBASIC7.29□□□□□ -1.24
Pcdh19Q80TF3 Gm13610-201ENSMUST00000128298 951 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Pcdh19Q80TF3 Gm12590-201ENSMUST00000134226 404 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Pcdh19Q80TF3 Gm14401-204ENSMUST00000134614 973 ntAPPRIS P1 TSL 2 BASIC7.29□□□□□ -1.24
Pcdh19Q80TF3 Rpl35a-ps3-201ENSMUST00000147311 333 ntBASIC7.29□□□□□ -1.24
Pcdh19Q80TF3 Rpl35a-ps6-201ENSMUST00000148282 333 ntBASIC7.29□□□□□ -1.24
Pcdh19Q80TF3 Gm18354-201ENSMUST00000173515 1068 ntBASIC7.29□□□□□ -1.24
Pcdh19Q80TF3 Fam47e-207ENSMUST00000176621 746 ntTSL 3 BASIC7.29□□□□□ -1.24
Pcdh19Q80TF3 9430069I07Rik-201ENSMUST00000179647 336 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
Pcdh19Q80TF3 Gm26587-201ENSMUST00000180795 989 ntBASIC7.29□□□□□ -1.24
Retrieved 100 of 76,532 protein–RNA pairs in 95.9 ms