Protein–RNA interactions for Protein: Q5SP85

Ccdc85a, Coiled-coil domain-containing protein 85A, mousemouse

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc85aQ5SP85 Polr2b-201ENSMUST00000031167 4145 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Ccdc85aQ5SP85 Cntn5-204ENSMUST00000162484 3606 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Ccdc85aQ5SP85 Gm16973-202ENSMUST00000180752 1972 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Ccdc85aQ5SP85 Olfr1294-202ENSMUST00000208675 1983 ntAPPRIS P1 TSL 2 BASIC8.13□□□□□ -1.11
Ccdc85aQ5SP85 Gm30122-202ENSMUST00000218662 1556 ntTSL 5 BASIC8.13□□□□□ -1.11
Ccdc85aQ5SP85 Orc3-202ENSMUST00000108142 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
Ccdc85aQ5SP85 Elf1-204ENSMUST00000227192 3765 ntAPPRIS ALT2 BASIC8.13□□□□□ -1.11
Ccdc85aQ5SP85 Gm15638-203ENSMUST00000154775 2945 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Ccdc85aQ5SP85 Chm-202ENSMUST00000113388 4749 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Ccdc85aQ5SP85 Olfr1500-205ENSMUST00000216287 2178 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Ccdc85aQ5SP85 Slco2b1-202ENSMUST00000107086 3993 ntAPPRIS P3 TSL 1 (best) BASIC8.12□□□□□ -1.11
Ccdc85aQ5SP85 Satb1-203ENSMUST00000129667 2896 ntAPPRIS P2 TSL 5 BASIC8.12□□□□□ -1.11
Ccdc85aQ5SP85 Cd44-204ENSMUST00000111190 1412 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Ccdc85aQ5SP85 Tdrkh-202ENSMUST00000166032 5692 ntAPPRIS P2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Ccdc85aQ5SP85 Sorbs2-202ENSMUST00000067107 5597 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Ccdc85aQ5SP85 Anxa1-201ENSMUST00000025561 1674 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Ccdc85aQ5SP85 Olfr726-205ENSMUST00000215278 1324 ntAPPRIS P1 TSL 3 BASIC8.12□□□□□ -1.11
Ccdc85aQ5SP85 Stra6l-201ENSMUST00000030011 3606 ntAPPRIS P3 TSL 1 (best) BASIC8.12□□□□□ -1.11
Ccdc85aQ5SP85 Rnf219-202ENSMUST00000227640 1632 ntAPPRIS ALT2 BASIC8.12□□□□□ -1.11
Ccdc85aQ5SP85 Wdr72-205ENSMUST00000215440 5160 ntAPPRIS ALT2 TSL 5 BASIC8.12□□□□□ -1.11
Ccdc85aQ5SP85 Dclk1-202ENSMUST00000070418 7012 ntTSL 5 BASIC8.12□□□□□ -1.11
Ccdc85aQ5SP85 Ola1-203ENSMUST00000112055 1251 ntTSL 5 BASIC8.12□□□□□ -1.11
Ccdc85aQ5SP85 Gm12468-201ENSMUST00000116189 404 ntBASIC8.12□□□□□ -1.11
Ccdc85aQ5SP85 Gm14869-201ENSMUST00000119007 884 ntBASIC8.12□□□□□ -1.11
Ccdc85aQ5SP85 Defa-ps1-201ENSMUST00000119062 282 ntBASIC8.12□□□□□ -1.11
Ccdc85aQ5SP85 Gm14712-201ENSMUST00000120195 772 ntBASIC8.12□□□□□ -1.11
Ccdc85aQ5SP85 Defa-ps6-201ENSMUST00000122172 282 ntBASIC8.12□□□□□ -1.11
Ccdc85aQ5SP85 Gm15555-201ENSMUST00000128832 713 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Ccdc85aQ5SP85 Gm7613-201ENSMUST00000139070 487 ntBASIC8.12□□□□□ -1.11
Ccdc85aQ5SP85 Znrf1-210ENSMUST00000173781 337 ntTSL 3 BASIC8.12□□□□□ -1.11
Ccdc85aQ5SP85 Gm27804-201ENSMUST00000185135 119 ntBASIC8.12□□□□□ -1.11
Ccdc85aQ5SP85 Gm28556-201ENSMUST00000187489 673 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Ccdc85aQ5SP85 1810017P11Rik-201ENSMUST00000202592 558 ntBASIC8.12□□□□□ -1.11
Ccdc85aQ5SP85 Lair1-209ENSMUST00000205296 412 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Ccdc85aQ5SP85 Olfr565-ps1-201ENSMUST00000209824 944 ntBASIC8.12□□□□□ -1.11
Ccdc85aQ5SP85 AC157085.1-201ENSMUST00000216343 162 ntBASIC8.12□□□□□ -1.11
Ccdc85aQ5SP85 Olfr153-201ENSMUST00000217113 1258 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
Ccdc85aQ5SP85 Gm8264-201ENSMUST00000217801 465 ntBASIC8.12□□□□□ -1.11
Ccdc85aQ5SP85 1810014B01Rik-205ENSMUST00000218691 323 ntTSL 3 BASIC8.12□□□□□ -1.11
Ccdc85aQ5SP85 4930471E15Rik-201ENSMUST00000221147 626 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Ccdc85aQ5SP85 AC163667.1-201ENSMUST00000225201 1289 ntBASIC8.12□□□□□ -1.11
Ccdc85aQ5SP85 Olfr190-201ENSMUST00000071243 924 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
Ccdc85aQ5SP85 Slxl1-201ENSMUST00000088740 730 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Ccdc85aQ5SP85 Spata22-202ENSMUST00000092926 1274 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Ccdc85aQ5SP85 Ncor1-204ENSMUST00000101066 8852 ntAPPRIS P2 TSL 5 BASIC8.12□□□□□ -1.11
Ccdc85aQ5SP85 Tlr4-202ENSMUST00000107365 1866 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Ccdc85aQ5SP85 Ryr2-202ENSMUST00000170156 16813 ntAPPRIS ALT2 TSL 5 BASIC8.12□□□□□ -1.11
Ccdc85aQ5SP85 Ryr2-201ENSMUST00000021750 16814 ntAPPRIS P2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Ccdc85aQ5SP85 Gria3-201ENSMUST00000076349 5192 ntAPPRIS P3 TSL 1 (best) BASIC8.12□□□□□ -1.11
Ccdc85aQ5SP85 Gm28407-201ENSMUST00000185630 1497 ntTSL 5 BASIC8.12□□□□□ -1.11
Ccdc85aQ5SP85 Gm28108-201ENSMUST00000186747 1497 ntTSL 5 BASIC8.12□□□□□ -1.11
Ccdc85aQ5SP85 Gm28218-202ENSMUST00000186782 1498 ntTSL 5 BASIC8.12□□□□□ -1.11
Ccdc85aQ5SP85 Gm29511-201ENSMUST00000187580 1497 ntTSL 5 BASIC8.12□□□□□ -1.11
Ccdc85aQ5SP85 Gm28367-201ENSMUST00000187942 1496 ntTSL 5 BASIC8.12□□□□□ -1.11
Ccdc85aQ5SP85 Gm29549-202ENSMUST00000189569 1497 ntTSL 5 BASIC8.12□□□□□ -1.11
Ccdc85aQ5SP85 Gm37952-202ENSMUST00000192516 1497 ntTSL 5 BASIC8.12□□□□□ -1.11
Ccdc85aQ5SP85 Mgam-202ENSMUST00000201148 6488 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Ccdc85aQ5SP85 Mgam-201ENSMUST00000071535 6488 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Ccdc85aQ5SP85 Scaper-202ENSMUST00000214747 5231 ntAPPRIS ALT2 TSL 5 BASIC8.12□□□□□ -1.11
Ccdc85aQ5SP85 Calcr-202ENSMUST00000115622 3721 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Ccdc85aQ5SP85 Gm7954-201ENSMUST00000164967 1403 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Ccdc85aQ5SP85 Gm8082-201ENSMUST00000165349 1403 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Ccdc85aQ5SP85 Gm6494-201ENSMUST00000218604 2298 ntBASIC8.12□□□□□ -1.11
Ccdc85aQ5SP85 Birc2-202ENSMUST00000074246 3130 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Ccdc85aQ5SP85 Zscan18-203ENSMUST00000210650 3668 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
Ccdc85aQ5SP85 Coq8a-217ENSMUST00000170472 3928 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Ccdc85aQ5SP85 Tubgcp5-201ENSMUST00000032627 3905 ntAPPRIS P2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Ccdc85aQ5SP85 Gm38118-201ENSMUST00000192052 2222 ntBASIC8.11□□□□□ -1.11
Ccdc85aQ5SP85 Birc2-204ENSMUST00000190341 3331 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
Ccdc85aQ5SP85 Gm14976-201ENSMUST00000117055 1394 ntBASIC8.11□□□□□ -1.11
Ccdc85aQ5SP85 Pramel-201ENSMUST00000118979 1383 ntBASIC8.11□□□□□ -1.11
Ccdc85aQ5SP85 Usp50-201ENSMUST00000028842 1361 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Ccdc85aQ5SP85 Adgrl3-206ENSMUST00000118034 4947 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
Ccdc85aQ5SP85 Abca4-201ENSMUST00000013995 7263 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Ccdc85aQ5SP85 Gm12290-201ENSMUST00000145095 2112 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Ccdc85aQ5SP85 Gm28359-201ENSMUST00000187470 1322 ntBASIC8.11□□□□□ -1.11
Ccdc85aQ5SP85 Scn11a-201ENSMUST00000070617 5837 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Ccdc85aQ5SP85 Agps-203ENSMUST00000175646 1839 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
Ccdc85aQ5SP85 F930017D23Rik-201ENSMUST00000099888 1836 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Ccdc85aQ5SP85 Kcnj15-207ENSMUST00000113861 3385 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Ccdc85aQ5SP85 Pomk-201ENSMUST00000061850 3613 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Ccdc85aQ5SP85 4933413L06Rik-201ENSMUST00000110292 809 ntTSL 2 BASIC8.11□□□□□ -1.11
Ccdc85aQ5SP85 H3f3a-ps1-201ENSMUST00000119546 410 ntBASIC8.11□□□□□ -1.11
Ccdc85aQ5SP85 Gm13754-201ENSMUST00000120486 998 ntBASIC8.11□□□□□ -1.11
Ccdc85aQ5SP85 Gm25318-201ENSMUST00000122554 314 ntBASIC8.11□□□□□ -1.11
Ccdc85aQ5SP85 Gm15551-201ENSMUST00000132762 535 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Ccdc85aQ5SP85 Gm15564-201ENSMUST00000144134 545 ntTSL 3 BASIC8.11□□□□□ -1.11
Ccdc85aQ5SP85 Gm16096-202ENSMUST00000149386 819 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Ccdc85aQ5SP85 Gm25556-201ENSMUST00000158077 144 ntBASIC8.11□□□□□ -1.11
Ccdc85aQ5SP85 Gm22693-201ENSMUST00000175049 442 ntBASIC8.11□□□□□ -1.11
Ccdc85aQ5SP85 Gm20702-201ENSMUST00000176181 460 ntBASIC8.11□□□□□ -1.11
Ccdc85aQ5SP85 Gm3460-202ENSMUST00000178927 618 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
Ccdc85aQ5SP85 Gm21103-203ENSMUST00000179042 618 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
Ccdc85aQ5SP85 Gm3029-202ENSMUST00000179327 618 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
Ccdc85aQ5SP85 Gm4340-202ENSMUST00000181036 1197 ntAPPRIS ALT2 TSL 3 BASIC8.11□□□□□ -1.11
Ccdc85aQ5SP85 Wfdc15b-201ENSMUST00000018355 510 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Ccdc85aQ5SP85 Gm5261-201ENSMUST00000185860 713 ntBASIC8.11□□□□□ -1.11
Ccdc85aQ5SP85 Gm37543-201ENSMUST00000192443 1031 ntBASIC8.11□□□□□ -1.11
Ccdc85aQ5SP85 Gm37439-201ENSMUST00000193150 856 ntBASIC8.11□□□□□ -1.11
Ccdc85aQ5SP85 Olfr1310-201ENSMUST00000207169 1009 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 71.2 ms