Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Hspe1-ps4-201ENSMUST00000119538 286 ntBASIC5.68□□□□□ -1.5
Nkx3-1P97436 Rps29-ps-201ENSMUST00000122083 172 ntBASIC5.68□□□□□ -1.5
Nkx3-1P97436 Gm12107-201ENSMUST00000132857 889 ntTSL 5 BASIC5.68□□□□□ -1.5
Nkx3-1P97436 Gm11940-201ENSMUST00000153599 417 ntTSL 3 BASIC5.68□□□□□ -1.5
Nkx3-1P97436 Gm26162-201ENSMUST00000157793 132 ntBASIC5.68□□□□□ -1.5
Nkx3-1P97436 Gm9064-201ENSMUST00000163579 566 ntBASIC5.68□□□□□ -1.5
Nkx3-1P97436 Gm3047-201ENSMUST00000164069 822 ntAPPRIS P5 TSL 5 BASIC5.68□□□□□ -1.5
Nkx3-1P97436 Gm6401-202ENSMUST00000164232 618 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
Nkx3-1P97436 Gm17079-201ENSMUST00000167231 666 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Nkx3-1P97436 Gm3029-201ENSMUST00000168306 984 ntAPPRIS P5 TSL 5 BASIC5.68□□□□□ -1.5
Nkx3-1P97436 Lrrc4-202ENSMUST00000171353 883 ntTSL 3 BASIC5.68□□□□□ -1.5
Nkx3-1P97436 Raet1e-202ENSMUST00000178026 1218 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Nkx3-1P97436 Gm17048-201ENSMUST00000179266 847 ntBASIC5.68□□□□□ -1.5
Nkx3-1P97436 Gm27005-201ENSMUST00000182783 921 ntBASIC5.68□□□□□ -1.5
Nkx3-1P97436 Gm29357-201ENSMUST00000186877 698 ntBASIC5.68□□□□□ -1.5
Nkx3-1P97436 Halr1-203ENSMUST00000189071 511 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Nkx3-1P97436 Fabp9-202ENSMUST00000191678 647 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Nkx3-1P97436 Gm3970-201ENSMUST00000198001 334 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Nkx3-1P97436 Gm36793-201ENSMUST00000199211 922 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Nkx3-1P97436 Fkbp1a-ps2-201ENSMUST00000219474 311 ntBASIC5.68□□□□□ -1.5
Nkx3-1P97436 Gm46332-202ENSMUST00000220320 516 ntTSL 3 BASIC5.68□□□□□ -1.5
Nkx3-1P97436 Gm19154-201ENSMUST00000223330 940 ntBASIC5.68□□□□□ -1.5
Nkx3-1P97436 Olfr691-201ENSMUST00000057528 969 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Nkx3-1P97436 Zfp626-201ENSMUST00000080175 816 ntTSL 5 BASIC5.68□□□□□ -1.5
Nkx3-1P97436 Vmn1r50-201ENSMUST00000081706 933 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Nkx3-1P97436 Gm26130-201ENSMUST00000083171 138 ntBASIC5.68□□□□□ -1.5
Nkx3-1P97436 Olfr519-201ENSMUST00000084752 960 ntBASIC5.68□□□□□ -1.5
Nkx3-1P97436 Raet1d-201ENSMUST00000095795 1271 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Nkx3-1P97436 Tmem232-202ENSMUST00000086722 2588 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Nkx3-1P97436 Olfr488-202ENSMUST00000211508 4624 ntAPPRIS P1 TSL 3 BASIC5.68□□□□□ -1.5
Nkx3-1P97436 Olfr488-203ENSMUST00000215173 4605 ntAPPRIS P1 TSL 3 BASIC5.68□□□□□ -1.5
Nkx3-1P97436 Plb1-201ENSMUST00000101376 4699 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Nkx3-1P97436 Gm10032-201ENSMUST00000071522 1887 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Nkx3-1P97436 Slco1a6-201ENSMUST00000111827 2815 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Nkx3-1P97436 Cyp4a10-202ENSMUST00000094886 2052 ntAPPRIS ALT2 TSL 2 BASIC5.68□□□□□ -1.5
Nkx3-1P97436 Itih5l-ps-201ENSMUST00000145639 3964 ntBASIC5.68□□□□□ -1.5
Nkx3-1P97436 Zfp712-201ENSMUST00000167565 3968 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Nkx3-1P97436 Rapgef4os3-201ENSMUST00000132792 3485 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Nkx3-1P97436 Pomp-202ENSMUST00000201120 3850 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Nkx3-1P97436 Dleu2-207ENSMUST00000182756 3530 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Nkx3-1P97436 Gm37772-201ENSMUST00000191635 1394 ntBASIC5.67□□□□□ -1.5
Nkx3-1P97436 Gm29194-201ENSMUST00000189250 2167 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Nkx3-1P97436 Trove2-202ENSMUST00000159879 8738 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Nkx3-1P97436 Nsd1-207ENSMUST00000224973 9905 ntBASIC5.67□□□□□ -1.5
Nkx3-1P97436 Olfr292-201ENSMUST00000080165 3211 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
Nkx3-1P97436 Olfr1275-202ENSMUST00000216421 2418 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Nkx3-1P97436 Slc17a4-201ENSMUST00000021769 1604 ntAPPRIS P2 TSL 5 BASIC5.67□□□□□ -1.5
Nkx3-1P97436 Mrpl48-208ENSMUST00000150042 4285 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Nkx3-1P97436 Zgrf1-203ENSMUST00000196141 6932 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Nkx3-1P97436 Gm37090-201ENSMUST00000195694 4105 ntBASIC5.67□□□□□ -1.5
Nkx3-1P97436 Zfp449-201ENSMUST00000101560 3738 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Nkx3-1P97436 Rfc1-206ENSMUST00000204965 4751 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
Nkx3-1P97436 2500004C02Rik-202ENSMUST00000128026 1898 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Nkx3-1P97436 Gm28112-201ENSMUST00000190898 1875 ntBASIC5.67□□□□□ -1.5
Nkx3-1P97436 Gm10735-201ENSMUST00000099162 2943 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Nkx3-1P97436 AC155941.4-201ENSMUST00000219731 2705 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Nkx3-1P97436 AC153132.1-201ENSMUST00000222625 2705 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Nkx3-1P97436 Gm5600-202ENSMUST00000211589 2331 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Nkx3-1P97436 Gm20815-201ENSMUST00000115496 1224 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Nkx3-1P97436 Gm12181-201ENSMUST00000121448 531 ntBASIC5.67□□□□□ -1.5
Nkx3-1P97436 Gm16095-201ENSMUST00000128235 253 ntTSL 5 BASIC5.67□□□□□ -1.5
Nkx3-1P97436 Mir1960-201ENSMUST00000157488 78 ntBASIC5.67□□□□□ -1.5
Nkx3-1P97436 Gm26410-201ENSMUST00000157670 261 ntBASIC5.67□□□□□ -1.5
Nkx3-1P97436 Gm23276-201ENSMUST00000157913 138 ntBASIC5.67□□□□□ -1.5
Nkx3-1P97436 Gm22518-201ENSMUST00000158267 68 ntBASIC5.67□□□□□ -1.5
Nkx3-1P97436 Gm8837-201ENSMUST00000161037 1107 ntBASIC5.67□□□□□ -1.5
Nkx3-1P97436 Ptpn4-204ENSMUST00000163621 431 ntTSL 3 BASIC5.67□□□□□ -1.5
Nkx3-1P97436 Sbp-203ENSMUST00000182519 368 ntTSL 2 BASIC5.67□□□□□ -1.5
Nkx3-1P97436 4930556G22Rik-201ENSMUST00000185689 741 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Nkx3-1P97436 Gm29197-201ENSMUST00000185922 702 ntBASIC5.67□□□□□ -1.5
Nkx3-1P97436 1700003I22Rik-201ENSMUST00000186048 424 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Nkx3-1P97436 Slamf7-205ENSMUST00000194791 909 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
Nkx3-1P97436 Ighv8-2-201ENSMUST00000195037 359 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Nkx3-1P97436 Igkv12-67-201ENSMUST00000197806 354 ntBASIC5.67□□□□□ -1.5
Nkx3-1P97436 4933401H06Rik-201ENSMUST00000199058 827 ntTSL 3 BASIC5.67□□□□□ -1.5
Nkx3-1P97436 Gm36448-201ENSMUST00000199916 438 ntBASIC5.67□□□□□ -1.5
Nkx3-1P97436 Gpr19-210ENSMUST00000203762 498 ntTSL 3 BASIC5.67□□□□□ -1.5
Nkx3-1P97436 Gm18838-201ENSMUST00000204855 886 ntBASIC5.67□□□□□ -1.5
Nkx3-1P97436 Gm18805-201ENSMUST00000206872 655 ntBASIC5.67□□□□□ -1.5
Nkx3-1P97436 AC154248.1-201ENSMUST00000222072 495 ntTSL 5 BASIC5.67□□□□□ -1.5
Nkx3-1P97436 4933433N18Rik-201ENSMUST00000222134 1220 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Nkx3-1P97436 AC154808.1-201ENSMUST00000223156 730 ntTSL 5 BASIC5.67□□□□□ -1.5
Nkx3-1P97436 Phf6-202ENSMUST00000101587 3639 ntTSL 2 BASIC5.67□□□□□ -1.5
Nkx3-1P97436 Bbx-201ENSMUST00000066037 4523 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Nkx3-1P97436 Olfr1500-205ENSMUST00000216287 2178 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Nkx3-1P97436 Zfp78-202ENSMUST00000108559 1539 ntAPPRIS P4 TSL 2 BASIC5.67□□□□□ -1.5
Nkx3-1P97436 Olfr318-203ENSMUST00000214728 4552 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Nkx3-1P97436 5830416I19Rik-201ENSMUST00000198687 2627 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Nkx3-1P97436 Gm44704-201ENSMUST00000208963 1990 ntBASIC5.67□□□□□ -1.5
Nkx3-1P97436 Mef2c-214ENSMUST00000197722 3517 ntTSL 5 BASIC5.67□□□□□ -1.5
Nkx3-1P97436 Dmtf1-207ENSMUST00000183973 2408 ntAPPRIS ALT1 TSL 5 BASIC5.67□□□□□ -1.5
Nkx3-1P97436 Shroom4-201ENSMUST00000089520 8201 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Nkx3-1P97436 Olfr122-204ENSMUST00000217119 2224 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Nkx3-1P97436 Gm15930-201ENSMUST00000156603 2037 ntBASIC5.67□□□□□ -1.5
Nkx3-1P97436 Prrc2c-209ENSMUST00000182593 9022 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
Nkx3-1P97436 Zfp773-202ENSMUST00000211240 4073 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Nkx3-1P97436 Zscan18-201ENSMUST00000046245 3626 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Nkx3-1P97436 Smarca2-242ENSMUST00000208751 1846 ntTSL 5 BASIC5.67□□□□□ -1.5
Nkx3-1P97436 Gm45001-201ENSMUST00000208279 2515 ntBASIC5.67□□□□□ -1.5
Nkx3-1P97436 BC046251-201ENSMUST00000154632 3653 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 57 ms