Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Fam229b-209ENSMUST00000149949 736 ntAPPRIS P1 TSL 3 BASIC7.3□□□□□ -1.24
Col2a1P28481 Gm14419-203ENSMUST00000156844 752 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Col2a1P28481 Dab2-209ENSMUST00000161040 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
Col2a1P28481 Mup7-203ENSMUST00000166098 1033 ntAPPRIS P3 TSL 5 BASIC7.3□□□□□ -1.24
Col2a1P28481 Gm2453-201ENSMUST00000193383 357 ntTSL 5 BASIC7.3□□□□□ -1.24
Col2a1P28481 Gm44221-201ENSMUST00000203552 388 ntBASIC7.3□□□□□ -1.24
Col2a1P28481 AC119894.1-201ENSMUST00000220399 350 ntBASIC7.3□□□□□ -1.24
Col2a1P28481 Gm7557-201ENSMUST00000221935 865 ntBASIC7.3□□□□□ -1.24
Col2a1P28481 Mcts1-201ENSMUST00000000365 783 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Col2a1P28481 Pmis2-201ENSMUST00000051495 699 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Col2a1P28481 Mup4-201ENSMUST00000075973 922 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Col2a1P28481 Mup13-202ENSMUST00000098042 984 ntAPPRIS P3 TSL 5 BASIC7.3□□□□□ -1.24
Col2a1P28481 Csde1-214ENSMUST00000199240 3457 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Col2a1P28481 Smad5-201ENSMUST00000069557 6584 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Col2a1P28481 Tcf7l2-209ENSMUST00000111656 3629 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
Col2a1P28481 Gm43425-201ENSMUST00000201793 3291 ntBASIC7.3□□□□□ -1.24
Col2a1P28481 Dixdc1-201ENSMUST00000034566 5709 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Col2a1P28481 Arhgef9-209ENSMUST00000181987 6222 ntTSL 2 BASIC7.3□□□□□ -1.24
Col2a1P28481 Sytl2-206ENSMUST00000190731 3838 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
Col2a1P28481 AC139941.2-201ENSMUST00000221565 1824 ntBASIC7.3□□□□□ -1.24
Col2a1P28481 Sox6-205ENSMUST00000169129 5122 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
Col2a1P28481 Gm43549-201ENSMUST00000198856 2661 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Col2a1P28481 Mroh2b-201ENSMUST00000045736 4829 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
Col2a1P28481 Gm26742-201ENSMUST00000181829 3340 ntTSL 5 BASIC7.3□□□□□ -1.24
Col2a1P28481 Rbms3-202ENSMUST00000068962 3320 ntAPPRIS P3 TSL 1 (best) BASIC7.3□□□□□ -1.24
Col2a1P28481 Sla-201ENSMUST00000100572 2626 ntAPPRIS P3 TSL 1 (best) BASIC7.3□□□□□ -1.24
Col2a1P28481 Gm4994-201ENSMUST00000118379 2187 ntBASIC7.3□□□□□ -1.24
Col2a1P28481 Gm9403-201ENSMUST00000196299 2181 ntBASIC7.3□□□□□ -1.24
Col2a1P28481 Cyfip1-203ENSMUST00000163845 4178 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Col2a1P28481 AC159264.1-201ENSMUST00000224844 4257 ntBASIC7.3□□□□□ -1.24
Col2a1P28481 Trbv12-2-201ENSMUST00000103269 385 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
Col2a1P28481 1700006E09Rik-203ENSMUST00000176722 608 ntTSL 3 BASIC7.3□□□□□ -1.24
Col2a1P28481 Gm26665-201ENSMUST00000181378 839 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Col2a1P28481 1700023F02Rik-202ENSMUST00000188279 412 ntTSL 2 BASIC7.3□□□□□ -1.24
Col2a1P28481 Gm6631-201ENSMUST00000193699 559 ntBASIC7.3□□□□□ -1.24
Col2a1P28481 Gm8863-201ENSMUST00000216630 926 ntBASIC7.3□□□□□ -1.24
Col2a1P28481 CAAA01125382.4-201ENSMUST00000217222 774 ntBASIC7.3□□□□□ -1.24
Col2a1P28481 AC154633.1-201ENSMUST00000223276 449 ntBASIC7.3□□□□□ -1.24
Col2a1P28481 AC157572.4-201ENSMUST00000228203 549 ntBASIC7.3□□□□□ -1.24
Col2a1P28481 Gm24454-201ENSMUST00000083349 132 ntBASIC7.3□□□□□ -1.24
Col2a1P28481 Fam183b-202ENSMUST00000094156 567 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Col2a1P28481 Olfr657-201ENSMUST00000098171 960 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
Col2a1P28481 Olfr548-ps1-201ENSMUST00000098228 933 ntBASIC7.3□□□□□ -1.24
Col2a1P28481 Gm43766-201ENSMUST00000200590 5417 ntBASIC7.3□□□□□ -1.24
Col2a1P28481 A330076H08Rik-202ENSMUST00000207694 1836 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Col2a1P28481 4933430H16Rik-201ENSMUST00000209078 1319 ntTSL 5 BASIC7.29□□□□□ -1.24
Col2a1P28481 Ttll6-201ENSMUST00000107680 3485 ntAPPRIS ALT2 TSL 5 BASIC7.29□□□□□ -1.24
Col2a1P28481 Gm16568-201ENSMUST00000066038 1910 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Col2a1P28481 Slc26a9-201ENSMUST00000049027 4739 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Col2a1P28481 C630043F03Rik-201ENSMUST00000122923 2581 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Col2a1P28481 Pabpc4l-201ENSMUST00000166505 5218 ntAPPRIS P1 TSL 2 BASIC7.29□□□□□ -1.24
Col2a1P28481 Ccdc127-201ENSMUST00000022063 9559 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Col2a1P28481 Ddx24-201ENSMUST00000044923 2850 ntAPPRIS P3 TSL 1 (best) BASIC7.29□□□□□ -1.24
Col2a1P28481 Usp40-201ENSMUST00000040783 5049 ntAPPRIS P3 TSL 1 (best) BASIC7.29□□□□□ -1.24
Col2a1P28481 Gm26512-201ENSMUST00000181874 3042 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Col2a1P28481 Ccdc191-203ENSMUST00000132859 3779 ntAPPRIS ALT2 TSL 5 BASIC7.29□□□□□ -1.24
Col2a1P28481 R3hdm2-202ENSMUST00000077046 4029 ntAPPRIS P2 TSL 5 BASIC7.29□□□□□ -1.24
Col2a1P28481 Gm4924-203ENSMUST00000210381 3330 ntAPPRIS P1 TSL 2 BASIC7.29□□□□□ -1.24
Col2a1P28481 Zbtb38-201ENSMUST00000093798 4091 ntAPPRIS P1 TSL 2 BASIC7.29□□□□□ -1.24
Col2a1P28481 Olfr350-202ENSMUST00000214457 2022 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
Col2a1P28481 Gm22714-201ENSMUST00000116894 78 ntBASIC7.29□□□□□ -1.24
Col2a1P28481 Gm13641-201ENSMUST00000117993 473 ntBASIC7.29□□□□□ -1.24
Col2a1P28481 Gm11787-201ENSMUST00000121996 1050 ntBASIC7.29□□□□□ -1.24
Col2a1P28481 Gm12066-201ENSMUST00000123592 443 ntTSL 3 BASIC7.29□□□□□ -1.24
Col2a1P28481 Mir6361-201ENSMUST00000185079 101 ntBASIC7.29□□□□□ -1.24
Col2a1P28481 Olfr1252-201ENSMUST00000186710 1099 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
Col2a1P28481 Gm37265-201ENSMUST00000191698 885 ntBASIC7.29□□□□□ -1.24
Col2a1P28481 4930590L14Rik-201ENSMUST00000196030 836 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Col2a1P28481 Gm5306-201ENSMUST00000203325 757 ntBASIC7.29□□□□□ -1.24
Col2a1P28481 Gm2996-201ENSMUST00000211398 537 ntBASIC7.29□□□□□ -1.24
Col2a1P28481 4921501I09Rik-201ENSMUST00000220337 384 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Col2a1P28481 9530002B09Rik-201ENSMUST00000024032 803 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Col2a1P28481 Ccdc54-201ENSMUST00000062439 1296 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
Col2a1P28481 Gm2531-201ENSMUST00000075609 512 ntBASIC7.29□□□□□ -1.24
Col2a1P28481 Gm8526-201ENSMUST00000079153 475 ntBASIC7.29□□□□□ -1.24
Col2a1P28481 Gm22300-201ENSMUST00000082661 126 ntBASIC7.29□□□□□ -1.24
Col2a1P28481 Frrs1-202ENSMUST00000195905 6823 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
Col2a1P28481 Psd4-210ENSMUST00000166388 4181 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Col2a1P28481 Trappc2-202ENSMUST00000112194 1418 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
Col2a1P28481 Gm10862-201ENSMUST00000193956 3350 ntBASIC7.29□□□□□ -1.24
Col2a1P28481 AC138221.1-201ENSMUST00000216180 4944 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
Col2a1P28481 Spen-201ENSMUST00000078886 12082 ntAPPRIS ALT2 TSL 5 BASIC7.28□□□□□ -1.24
Col2a1P28481 Grin2a-206ENSMUST00000199708 14634 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
Col2a1P28481 Soat1-201ENSMUST00000051396 2925 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Col2a1P28481 Gm17529-201ENSMUST00000180738 3093 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Col2a1P28481 Gm37953-201ENSMUST00000195293 1884 ntBASIC7.28□□□□□ -1.24
Col2a1P28481 Nwd1-209ENSMUST00000228312 10789 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
Col2a1P28481 Tecta-201ENSMUST00000042190 7338 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Col2a1P28481 Gm9602-201ENSMUST00000163325 2062 ntAPPRIS P5 TSL 1 (best) BASIC7.28□□□□□ -1.24
Col2a1P28481 Gm8356-201ENSMUST00000163636 2062 ntAPPRIS P5 TSL 5 BASIC7.28□□□□□ -1.24
Col2a1P28481 Cacna1e-201ENSMUST00000004214 12697 ntTSL 5 BASIC7.28□□□□□ -1.24
Col2a1P28481 Vmn2r96-201ENSMUST00000165692 2343 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
Col2a1P28481 Ccdc175-201ENSMUST00000021494 2622 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
Col2a1P28481 Cd84-203ENSMUST00000135386 3434 ntAPPRIS ALT2 TSL 1 (best) BASIC7.28□□□□□ -1.24
Col2a1P28481 Tmigd3-201ENSMUST00000010279 900 ntAPPRIS P2 TSL 1 (best) BASIC7.28□□□□□ -1.24
Col2a1P28481 Cd47-202ENSMUST00000114496 867 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Col2a1P28481 Gm22710-201ENSMUST00000116892 125 ntBASIC7.28□□□□□ -1.24
Col2a1P28481 Gm23225-201ENSMUST00000158121 114 ntBASIC7.28□□□□□ -1.24
Col2a1P28481 Vmn2r-ps12-201ENSMUST00000175833 623 ntBASIC7.28□□□□□ -1.24
Col2a1P28481 AC157822.1-201ENSMUST00000196643 80 ntBASIC7.28□□□□□ -1.24
Retrieved 100 of 76,532 protein–RNA pairs in 58.6 ms