Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Wdr66-206ENSMUST00000163092 4009 ntTSL 5 BASIC5.35□□□□□ -1.55
Cdx1P18111 Zan-201ENSMUST00000117564 16481 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Cdx1P18111 Prom1-206ENSMUST00000171543 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
Cdx1P18111 Epha4-204ENSMUST00000188797 3612 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Cdx1P18111 5330409N07Rik-201ENSMUST00000222069 3518 ntBASIC5.35□□□□□ -1.55
Cdx1P18111 Gm29017-201ENSMUST00000190598 2092 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Cdx1P18111 Ppip5k2-205ENSMUST00000171129 3425 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
Cdx1P18111 Gm10309-201ENSMUST00000095186 2005 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Cdx1P18111 Zp3r-202ENSMUST00000128128 1926 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
Cdx1P18111 Csde1-215ENSMUST00000199420 4185 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
Cdx1P18111 Gm19084-201ENSMUST00000222939 1762 ntBASIC5.34□□□□□ -1.55
Cdx1P18111 Gm43637-201ENSMUST00000202206 2926 ntBASIC5.34□□□□□ -1.55
Cdx1P18111 Ifi44-201ENSMUST00000029671 2910 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Cdx1P18111 Rbmy-201ENSMUST00000100360 1708 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Cdx1P18111 Gm26603-201ENSMUST00000181380 2861 ntTSL 5 BASIC5.34□□□□□ -1.55
Cdx1P18111 Gm10256-202ENSMUST00000188114 1708 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Cdx1P18111 Gm21708-203ENSMUST00000190283 1708 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Cdx1P18111 Il18r1-206ENSMUST00000195684 2850 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Cdx1P18111 AC121942.1-201ENSMUST00000224459 2891 ntBASIC5.34□□□□□ -1.55
Cdx1P18111 Gm21093-201ENSMUST00000084677 1710 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
Cdx1P18111 Noc3l-201ENSMUST00000025963 3977 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Cdx1P18111 A930006L05Rik-201ENSMUST00000186821 2814 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Cdx1P18111 Cept1-202ENSMUST00000068301 2814 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
Cdx1P18111 Emsy-207ENSMUST00000205911 5079 ntTSL 5 BASIC5.34□□□□□ -1.55
Cdx1P18111 Gm42781-201ENSMUST00000201317 2719 ntBASIC5.34□□□□□ -1.55
Cdx1P18111 Gm26734-201ENSMUST00000181769 1594 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Cdx1P18111 Ptprd-218ENSMUST00000174180 5694 ntTSL 5 BASIC5.34□□□□□ -1.55
Cdx1P18111 Gm29220-201ENSMUST00000185862 1501 ntTSL 5 BASIC5.34□□□□□ -1.55
Cdx1P18111 Gm28966-201ENSMUST00000188951 1501 ntTSL 5 BASIC5.34□□□□□ -1.55
Cdx1P18111 Trappc13-203ENSMUST00000141557 3502 ntAPPRIS ALT1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Cdx1P18111 Gm26581-201ENSMUST00000181953 4479 ntTSL 2 BASIC5.34□□□□□ -1.55
Cdx1P18111 Cfap70-201ENSMUST00000022348 3469 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
Cdx1P18111 Olfr446-202ENSMUST00000215369 4399 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Cdx1P18111 Nsun6-203ENSMUST00000114713 2420 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Cdx1P18111 4833421K07Rik-201ENSMUST00000206146 1391 ntBASIC5.34□□□□□ -1.55
Cdx1P18111 Gm11342-203ENSMUST00000224879 1324 ntBASIC5.34□□□□□ -1.55
Cdx1P18111 Trav6-2-201ENSMUST00000103573 338 ntAPPRIS ALT2 BASIC5.34□□□□□ -1.55
Cdx1P18111 Gm23437-201ENSMUST00000104036 127 ntBASIC5.34□□□□□ -1.55
Cdx1P18111 Gm17170-201ENSMUST00000112785 316 ntBASIC5.34□□□□□ -1.55
Cdx1P18111 Rpl31-ps10-201ENSMUST00000116034 378 ntBASIC5.34□□□□□ -1.55
Cdx1P18111 Gm13130-201ENSMUST00000119195 1166 ntBASIC5.34□□□□□ -1.55
Cdx1P18111 Rpl31-ps11-201ENSMUST00000119898 377 ntBASIC5.34□□□□□ -1.55
Cdx1P18111 Gm13486-201ENSMUST00000119910 282 ntBASIC5.34□□□□□ -1.55
Cdx1P18111 Rpl31-ps12-201ENSMUST00000119957 375 ntBASIC5.34□□□□□ -1.55
Cdx1P18111 Gm12104-201ENSMUST00000120359 979 ntBASIC5.34□□□□□ -1.55
Cdx1P18111 Gm12903-201ENSMUST00000121015 544 ntBASIC5.34□□□□□ -1.55
Cdx1P18111 Gm12145-201ENSMUST00000142108 217 ntTSL 3 BASIC5.34□□□□□ -1.55
Cdx1P18111 Gm14097-201ENSMUST00000147868 470 ntTSL 3 BASIC5.34□□□□□ -1.55
Cdx1P18111 Gm16070-202ENSMUST00000149914 2146 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Cdx1P18111 Gm6428-201ENSMUST00000161062 345 ntBASIC5.34□□□□□ -1.55
Cdx1P18111 Gm9047-201ENSMUST00000171317 682 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Cdx1P18111 Trav6d-5-201ENSMUST00000180687 338 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
Cdx1P18111 Rpl31-ps8-201ENSMUST00000181935 378 ntBASIC5.34□□□□□ -1.55
Cdx1P18111 Gm27209-201ENSMUST00000183834 898 ntTSL 3 BASIC5.34□□□□□ -1.55
Cdx1P18111 Gm28501-201ENSMUST00000188729 421 ntTSL 2 BASIC5.34□□□□□ -1.55
Cdx1P18111 Rpl31-206ENSMUST00000195123 356 ntTSL 3 BASIC5.34□□□□□ -1.55
Cdx1P18111 Gm37220-201ENSMUST00000195179 415 ntTSL 5 BASIC5.34□□□□□ -1.55
Cdx1P18111 Gm43786-202ENSMUST00000202157 616 ntTSL 3 BASIC5.34□□□□□ -1.55
Cdx1P18111 Gm44836-201ENSMUST00000205869 336 ntTSL 5 BASIC5.34□□□□□ -1.55
Cdx1P18111 4930465I24Rik-201ENSMUST00000209697 426 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Cdx1P18111 Gm39158-201ENSMUST00000210178 856 ntTSL 3 BASIC5.34□□□□□ -1.55
Cdx1P18111 Lncbate1-201ENSMUST00000211953 812 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Cdx1P18111 Gm8275-201ENSMUST00000219732 424 ntBASIC5.34□□□□□ -1.55
Cdx1P18111 Gm32235-202ENSMUST00000220286 898 ntTSL 5 BASIC5.34□□□□□ -1.55
Cdx1P18111 Tpbpb-202ENSMUST00000223698 746 ntAPPRIS P2 BASIC5.34□□□□□ -1.55
Cdx1P18111 AC159188.3-201ENSMUST00000224199 880 ntBASIC5.34□□□□□ -1.55
Cdx1P18111 AC115304.1-202ENSMUST00000226850 837 ntBASIC5.34□□□□□ -1.55
Cdx1P18111 Cox20-201ENSMUST00000027781 471 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Cdx1P18111 Cwc15-201ENSMUST00000004200 1111 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Cdx1P18111 Zfp457-201ENSMUST00000049705 2117 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Cdx1P18111 Olfr1448-201ENSMUST00000054737 945 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
Cdx1P18111 Olfr1383-201ENSMUST00000077143 940 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
Cdx1P18111 Rpl31-ps4-201ENSMUST00000079114 390 ntBASIC5.34□□□□□ -1.55
Cdx1P18111 Gm23238-201ENSMUST00000083007 164 ntBASIC5.34□□□□□ -1.55
Cdx1P18111 Gm24924-201ENSMUST00000084007 164 ntBASIC5.34□□□□□ -1.55
Cdx1P18111 Rpl31-ps9-201ENSMUST00000086596 378 ntBASIC5.34□□□□□ -1.55
Cdx1P18111 Vmn1r50-202ENSMUST00000089417 2059 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
Cdx1P18111 Exph5-201ENSMUST00000051014 5957 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Cdx1P18111 AA792892-202ENSMUST00000202253 1980 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Cdx1P18111 Zfp81-201ENSMUST00000054072 6639 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Cdx1P18111 Olfr43-204ENSMUST00000215550 1854 ntAPPRIS P1 TSL 3 BASIC5.34□□□□□ -1.55
Cdx1P18111 Gm26742-201ENSMUST00000181829 3340 ntTSL 5 BASIC5.34□□□□□ -1.55
Cdx1P18111 Vmn1r220-204ENSMUST00000227950 6238 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
Cdx1P18111 Gm37880-201ENSMUST00000192216 3257 ntBASIC5.34□□□□□ -1.55
Cdx1P18111 Olfr1217-204ENSMUST00000216592 3992 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.56
Cdx1P18111 Dtna-203ENSMUST00000220904 3860 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
Cdx1P18111 Fsbp-201ENSMUST00000180239 4358 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
Cdx1P18111 Gm26791-201ENSMUST00000180942 1605 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
Cdx1P18111 AC091783.1-201ENSMUST00000223614 1613 ntBASIC5.34□□□□□ -1.56
Cdx1P18111 Tmc5-201ENSMUST00000057320 2926 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.56
Cdx1P18111 Mtus1-203ENSMUST00000093534 4148 ntAPPRIS P4 TSL 1 (best) BASIC5.33□□□□□ -1.56
Cdx1P18111 Lypd6-205ENSMUST00000169232 3499 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Cdx1P18111 Txndc16-207ENSMUST00000147853 2816 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Cdx1P18111 Skil-204ENSMUST00000118470 6578 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
Cdx1P18111 Txndc9-201ENSMUST00000162031 3381 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Cdx1P18111 Chek1-201ENSMUST00000034625 3397 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Cdx1P18111 AC155634.1-201ENSMUST00000221687 2706 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Cdx1P18111 Gsdmc4-201ENSMUST00000063530 1988 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Cdx1P18111 Zik1-201ENSMUST00000032551 4199 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Cdx1P18111 Dcun1d1-212ENSMUST00000198389 3020 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 68.6 ms