Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Wrn-202ENSMUST00000033991 6262 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Col6a3E9PWQ3 G3bp1-201ENSMUST00000018727 6703 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Col6a3E9PWQ3 Bcl2l11-202ENSMUST00000089634 2301 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Col6a3E9PWQ3 Srl-202ENSMUST00000090500 3698 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Col6a3E9PWQ3 Cd200r4-201ENSMUST00000114626 1700 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Col6a3E9PWQ3 Krcc1-202ENSMUST00000168700 1749 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Col6a3E9PWQ3 Ptprr-202ENSMUST00000105271 2856 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Col6a3E9PWQ3 AC162936.1-201ENSMUST00000223676 2368 ntBASIC6.19□□□□□ -1.42
Col6a3E9PWQ3 Ank3-228ENSMUST00000182692 3833 ntTSL 5 BASIC6.19□□□□□ -1.42
Col6a3E9PWQ3 Gm6657-204ENSMUST00000211288 1091 ntAPPRIS P5 TSL 5 BASIC6.19□□□□□ -1.42
Col6a3E9PWQ3 9430078K24Rik-202ENSMUST00000219857 348 ntTSL 3 BASIC6.19□□□□□ -1.42
Col6a3E9PWQ3 AC154840.1-201ENSMUST00000225216 408 ntBASIC6.19□□□□□ -1.42
Col6a3E9PWQ3 Anxa13-202ENSMUST00000227274 1201 ntBASIC6.19□□□□□ -1.42
Col6a3E9PWQ3 Atp13a4-208ENSMUST00000182627 4238 ntAPPRIS P3 TSL 5 BASIC6.19□□□□□ -1.42
Col6a3E9PWQ3 Vmn1r37-202ENSMUST00000226311 1305 ntBASIC6.19□□□□□ -1.42
Col6a3E9PWQ3 Vmn1r37-203ENSMUST00000226886 1308 ntBASIC6.19□□□□□ -1.42
Col6a3E9PWQ3 Gm43490-201ENSMUST00000197593 2652 ntBASIC6.19□□□□□ -1.42
Col6a3E9PWQ3 Tgif1-211ENSMUST00000186358 1455 ntTSL 3 BASIC6.19□□□□□ -1.42
Col6a3E9PWQ3 Cd209b-201ENSMUST00000084086 2039 ntAPPRIS P4 TSL 1 (best) BASIC6.19□□□□□ -1.42
Col6a3E9PWQ3 Myh10-203ENSMUST00000102611 7791 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Col6a3E9PWQ3 Vmn2r4-201ENSMUST00000170280 2484 ntAPPRIS P2 TSL 5 BASIC6.19□□□□□ -1.42
Col6a3E9PWQ3 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC6.19□□□□□ -1.42
Col6a3E9PWQ3 Gm15638-203ENSMUST00000154775 2945 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Col6a3E9PWQ3 Gm21051-201ENSMUST00000221757 1688 ntBASIC6.19□□□□□ -1.42
Col6a3E9PWQ3 Gm22493-201ENSMUST00000104494 132 ntBASIC6.19□□□□□ -1.42
Col6a3E9PWQ3 Gm12494-201ENSMUST00000121684 521 ntBASIC6.19□□□□□ -1.42
Col6a3E9PWQ3 Gm15501-202ENSMUST00000140687 625 ntBASIC6.19□□□□□ -1.42
Col6a3E9PWQ3 A330102I10Rik-203ENSMUST00000145801 737 ntTSL 5 BASIC6.19□□□□□ -1.42
Col6a3E9PWQ3 Gm11507-201ENSMUST00000156462 412 ntBASIC6.19□□□□□ -1.42
Col6a3E9PWQ3 Scgb2b24-201ENSMUST00000055444 523 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Col6a3E9PWQ3 Galnt11-203ENSMUST00000114952 2449 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Col6a3E9PWQ3 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Col6a3E9PWQ3 Adipor2-201ENSMUST00000032272 4184 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Col6a3E9PWQ3 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
Col6a3E9PWQ3 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Col6a3E9PWQ3 3732407C23Rik-201ENSMUST00000222770 3540 ntBASIC6.19□□□□□ -1.42
Col6a3E9PWQ3 Gm28278-201ENSMUST00000185603 1499 ntTSL 5 BASIC6.19□□□□□ -1.42
Col6a3E9PWQ3 Gm28279-201ENSMUST00000186248 1493 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Col6a3E9PWQ3 Gm28491-202ENSMUST00000186902 1493 ntTSL 5 BASIC6.19□□□□□ -1.42
Col6a3E9PWQ3 Gm29368-201ENSMUST00000187201 1489 ntTSL 5 BASIC6.19□□□□□ -1.42
Col6a3E9PWQ3 Gm28088-202ENSMUST00000187402 1493 ntTSL 5 BASIC6.19□□□□□ -1.42
Col6a3E9PWQ3 Gm28674-201ENSMUST00000187502 1493 ntTSL 5 BASIC6.19□□□□□ -1.42
Col6a3E9PWQ3 Gm28131-203ENSMUST00000187841 1493 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Col6a3E9PWQ3 Gm28487-202ENSMUST00000187894 1493 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Col6a3E9PWQ3 Gm29056-201ENSMUST00000187933 1493 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Col6a3E9PWQ3 Gm29074-203ENSMUST00000188026 1493 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Col6a3E9PWQ3 Gm28754-201ENSMUST00000188778 1493 ntTSL 5 BASIC6.19□□□□□ -1.42
Col6a3E9PWQ3 Gm28520-202ENSMUST00000189379 1493 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Col6a3E9PWQ3 Gm29275-202ENSMUST00000189475 1494 ntTSL 5 BASIC6.19□□□□□ -1.42
Col6a3E9PWQ3 Gm28963-202ENSMUST00000189567 1493 ntTSL 5 BASIC6.19□□□□□ -1.42
Col6a3E9PWQ3 Gm28519-203ENSMUST00000190126 1493 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Col6a3E9PWQ3 Gm29207-202ENSMUST00000190931 1493 ntTSL 5 BASIC6.19□□□□□ -1.42
Col6a3E9PWQ3 Gm28310-202ENSMUST00000191136 1493 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Col6a3E9PWQ3 Gm29646-202ENSMUST00000191146 1493 ntTSL 5 BASIC6.19□□□□□ -1.42
Col6a3E9PWQ3 Gm28762-203ENSMUST00000191259 1493 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Col6a3E9PWQ3 Gm28691-202ENSMUST00000191561 1493 ntTSL 5 BASIC6.19□□□□□ -1.42
Col6a3E9PWQ3 Gm38174-201ENSMUST00000191787 1494 ntTSL 5 BASIC6.19□□□□□ -1.42
Col6a3E9PWQ3 Zfp239-207ENSMUST00000172088 2812 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
Col6a3E9PWQ3 Ank3-230ENSMUST00000182795 3557 ntTSL 5 BASIC6.19□□□□□ -1.42
Col6a3E9PWQ3 Adgra1-201ENSMUST00000026548 4758 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Col6a3E9PWQ3 Gm19972-201ENSMUST00000218180 5664 ntBASIC6.19□□□□□ -1.42
Col6a3E9PWQ3 Setd1b-201ENSMUST00000056053 7362 ntAPPRIS P2 TSL 5 BASIC6.19□□□□□ -1.42
Col6a3E9PWQ3 Yy2-201ENSMUST00000065806 2867 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Col6a3E9PWQ3 Gm9877-201ENSMUST00000064271 2627 ntBASIC6.19□□□□□ -1.42
Col6a3E9PWQ3 Gm28977-201ENSMUST00000188678 2168 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Col6a3E9PWQ3 Fhl4-201ENSMUST00000059383 3402 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Col6a3E9PWQ3 Mettl15-201ENSMUST00000081631 1894 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Col6a3E9PWQ3 Mir99ahg-208ENSMUST00000182748 3151 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Col6a3E9PWQ3 Ntrk3-202ENSMUST00000039438 3977 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Col6a3E9PWQ3 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Col6a3E9PWQ3 Gm26079-201ENSMUST00000104066 133 ntBASIC6.19□□□□□ -1.42
Col6a3E9PWQ3 Gm6134-201ENSMUST00000117265 171 ntBASIC6.19□□□□□ -1.42
Col6a3E9PWQ3 Gm12974-201ENSMUST00000129875 333 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Col6a3E9PWQ3 Gm4831-201ENSMUST00000174626 594 ntBASIC6.19□□□□□ -1.42
Col6a3E9PWQ3 Mir6367-201ENSMUST00000183385 102 ntBASIC6.19□□□□□ -1.42
Col6a3E9PWQ3 Ghrl-207ENSMUST00000204533 323 ntTSL 2 BASIC6.19□□□□□ -1.42
Col6a3E9PWQ3 Gm34549-202ENSMUST00000207356 970 ntTSL 5 BASIC6.19□□□□□ -1.42
Col6a3E9PWQ3 Gm44516-201ENSMUST00000208794 833 ntTSL 5 BASIC6.19□□□□□ -1.42
Col6a3E9PWQ3 Resp18-201ENSMUST00000039534 748 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Col6a3E9PWQ3 Mapkbp1-201ENSMUST00000066058 6942 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Col6a3E9PWQ3 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Col6a3E9PWQ3 Usp7-207ENSMUST00000160405 4745 ntTSL 5 BASIC6.19□□□□□ -1.42
Col6a3E9PWQ3 Gm44102-201ENSMUST00000204031 1666 ntBASIC6.18□□□□□ -1.42
Col6a3E9PWQ3 Gm3106-201ENSMUST00000179743 2383 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Col6a3E9PWQ3 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Col6a3E9PWQ3 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
Col6a3E9PWQ3 4930452N14Rik-201ENSMUST00000189240 613 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Col6a3E9PWQ3 Gm45215-201ENSMUST00000206407 395 ntBASIC6.18□□□□□ -1.42
Col6a3E9PWQ3 Gm41231-201ENSMUST00000211525 449 ntTSL 5 BASIC6.18□□□□□ -1.42
Col6a3E9PWQ3 AC166341.1-201ENSMUST00000223360 105 ntBASIC6.18□□□□□ -1.42
Col6a3E9PWQ3 AC116591.1-201ENSMUST00000227919 351 ntBASIC6.18□□□□□ -1.42
Col6a3E9PWQ3 Defb25-201ENSMUST00000099203 293 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Col6a3E9PWQ3 Zmym3-203ENSMUST00000117901 5178 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Col6a3E9PWQ3 Trub1-201ENSMUST00000026072 4300 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Col6a3E9PWQ3 AL450321.1-201ENSMUST00000220600 3550 ntBASIC6.18□□□□□ -1.42
Col6a3E9PWQ3 Gm15448-202ENSMUST00000108619 2097 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
Col6a3E9PWQ3 Gm42873-201ENSMUST00000196110 1726 ntBASIC6.18□□□□□ -1.42
Col6a3E9PWQ3 Clasp2-201ENSMUST00000111838 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
Col6a3E9PWQ3 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC6.18□□□□□ -1.42
Col6a3E9PWQ3 Ctsl-205ENSMUST00000222517 6168 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 90.4 ms