Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Gm18310-201ENSMUST00000206494 3912 ntBASIC6.93□□□□□ -1.3
Upf3bQ3ULL6 Gm18409-201ENSMUST00000218988 2506 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Upf3bQ3ULL6 4921534H16Rik-202ENSMUST00000162911 2838 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Upf3bQ3ULL6 Il18r1-201ENSMUST00000087983 2826 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
Upf3bQ3ULL6 Gdap10-201ENSMUST00000180613 5003 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Upf3bQ3ULL6 Nqo2-202ENSMUST00000058978 3842 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Upf3bQ3ULL6 Zfp719-201ENSMUST00000058104 4494 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Upf3bQ3ULL6 Vmn1r81-202ENSMUST00000227080 13256 ntAPPRIS ALT2 BASIC6.93□□□□□ -1.3
Upf3bQ3ULL6 Usp17lb-201ENSMUST00000076501 1407 ntAPPRIS P2 TSL 1 (best) BASIC6.93□□□□□ -1.3
Upf3bQ3ULL6 Trove2-202ENSMUST00000159879 8738 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Upf3bQ3ULL6 Pum1-202ENSMUST00000097862 3991 ntAPPRIS ALT1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Upf3bQ3ULL6 Mat2a-202ENSMUST00000205335 3387 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Upf3bQ3ULL6 Rgsl1-203ENSMUST00000141249 1752 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Upf3bQ3ULL6 Gramd2-203ENSMUST00000128944 3705 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
Upf3bQ3ULL6 Gm28874-201ENSMUST00000190917 3134 ntBASIC6.92□□□□□ -1.3
Upf3bQ3ULL6 Olfr510-202ENSMUST00000213979 2898 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
Upf3bQ3ULL6 Gm42597-201ENSMUST00000196663 1544 ntBASIC6.92□□□□□ -1.3
Upf3bQ3ULL6 Fundc2-201ENSMUST00000033541 2562 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Upf3bQ3ULL6 Bivm-201ENSMUST00000035991 3313 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Upf3bQ3ULL6 Gm37255-201ENSMUST00000193302 3060 ntBASIC6.92□□□□□ -1.3
Upf3bQ3ULL6 Gm26340-201ENSMUST00000102365 99 ntBASIC6.92□□□□□ -1.3
Upf3bQ3ULL6 Gm14116-201ENSMUST00000117733 805 ntBASIC6.92□□□□□ -1.3
Upf3bQ3ULL6 Gm13207-201ENSMUST00000119862 773 ntBASIC6.92□□□□□ -1.3
Upf3bQ3ULL6 Rps12-ps20-201ENSMUST00000121168 402 ntBASIC6.92□□□□□ -1.3
Upf3bQ3ULL6 1700042G15Rik-203ENSMUST00000152001 583 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Upf3bQ3ULL6 Gm2619-202ENSMUST00000166777 651 ntBASIC6.92□□□□□ -1.3
Upf3bQ3ULL6 Gm23632-201ENSMUST00000175289 125 ntBASIC6.92□□□□□ -1.3
Upf3bQ3ULL6 Gm20685-201ENSMUST00000176654 489 ntTSL 3 BASIC6.92□□□□□ -1.3
Upf3bQ3ULL6 Gm20617-202ENSMUST00000177332 758 ntTSL 3 BASIC6.92□□□□□ -1.3
Upf3bQ3ULL6 Rps12-ps23-201ENSMUST00000179414 402 ntBASIC6.92□□□□□ -1.3
Upf3bQ3ULL6 Gm26509-201ENSMUST00000180947 948 ntBASIC6.92□□□□□ -1.3
Upf3bQ3ULL6 Mir7212-201ENSMUST00000184098 61 ntBASIC6.92□□□□□ -1.3
Upf3bQ3ULL6 Gm17847-201ENSMUST00000188261 1127 ntBASIC6.92□□□□□ -1.3
Upf3bQ3ULL6 Nanog-ps2-201ENSMUST00000190988 529 ntBASIC6.92□□□□□ -1.3
Upf3bQ3ULL6 Gm44361-201ENSMUST00000197960 94 ntBASIC6.92□□□□□ -1.3
Upf3bQ3ULL6 Gm32005-201ENSMUST00000212446 959 ntTSL 5 BASIC6.92□□□□□ -1.3
Upf3bQ3ULL6 AC170086.2-201ENSMUST00000224733 803 ntBASIC6.92□□□□□ -1.3
Upf3bQ3ULL6 AC167013.4-201ENSMUST00000226712 317 ntBASIC6.92□□□□□ -1.3
Upf3bQ3ULL6 Kcne3-201ENSMUST00000049333 1012 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Upf3bQ3ULL6 Spata31d1d-201ENSMUST00000052978 3827 ntAPPRIS P1 TSL 2 BASIC6.92□□□□□ -1.3
Upf3bQ3ULL6 Olfr1440-201ENSMUST00000054567 948 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
Upf3bQ3ULL6 Lrrc51-202ENSMUST00000098236 949 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Upf3bQ3ULL6 Zfp804b-201ENSMUST00000164784 3924 ntTSL 5 BASIC6.92□□□□□ -1.3
Upf3bQ3ULL6 Meg3-209ENSMUST00000146701 14548 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Upf3bQ3ULL6 Platr8-201ENSMUST00000146110 1349 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Upf3bQ3ULL6 Vmn1r11-202ENSMUST00000226968 2522 ntAPPRIS P2 BASIC6.92□□□□□ -1.3
Upf3bQ3ULL6 Gm10825-201ENSMUST00000180537 4478 ntTSL 2 BASIC6.92□□□□□ -1.3
Upf3bQ3ULL6 Gm26581-201ENSMUST00000181953 4479 ntTSL 2 BASIC6.92□□□□□ -1.3
Upf3bQ3ULL6 Foxp2-209ENSMUST00000131414 1381 ntTSL 5 BASIC6.92□□□□□ -1.3
Upf3bQ3ULL6 Slc17a4-202ENSMUST00000110407 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
Upf3bQ3ULL6 Ttc33-201ENSMUST00000022751 1832 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Upf3bQ3ULL6 Olfr1285-202ENSMUST00000220153 1430 ntTSL 5 BASIC6.92□□□□□ -1.3
Upf3bQ3ULL6 Gm45786-201ENSMUST00000213021 2278 ntBASIC6.92□□□□□ -1.3
Upf3bQ3ULL6 Gm18359-201ENSMUST00000173024 1459 ntBASIC6.92□□□□□ -1.3
Upf3bQ3ULL6 Ckap5-202ENSMUST00000099716 6574 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Upf3bQ3ULL6 Gm39214-201ENSMUST00000210912 1542 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Upf3bQ3ULL6 Tex11-201ENSMUST00000009814 3250 ntAPPRIS P3 TSL 1 (best) BASIC6.91□□□□□ -1.3
Upf3bQ3ULL6 Gm16344-201ENSMUST00000150084 1567 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Upf3bQ3ULL6 Olfr167-202ENSMUST00000214315 7435 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
Upf3bQ3ULL6 Olfr675-203ENSMUST00000214318 3828 ntTSL 5 BASIC6.91□□□□□ -1.3
Upf3bQ3ULL6 Ppargc1a-203ENSMUST00000132734 6464 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Upf3bQ3ULL6 Olfr118-202ENSMUST00000215811 1742 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
Upf3bQ3ULL6 2700078F05Rik-201ENSMUST00000194331 3244 ntBASIC6.91□□□□□ -1.3
Upf3bQ3ULL6 Sptlc3-201ENSMUST00000047370 2759 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Upf3bQ3ULL6 Olfr26-201ENSMUST00000104874 931 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
Upf3bQ3ULL6 Gm12886-201ENSMUST00000106266 1149 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
Upf3bQ3ULL6 Gm6654-201ENSMUST00000118950 348 ntBASIC6.91□□□□□ -1.3
Upf3bQ3ULL6 Gm13604-201ENSMUST00000119332 482 ntBASIC6.91□□□□□ -1.3
Upf3bQ3ULL6 Nlk-ps1-201ENSMUST00000120843 1230 ntBASIC6.91□□□□□ -1.3
Upf3bQ3ULL6 Gm12101-201ENSMUST00000121590 390 ntBASIC6.91□□□□□ -1.3
Upf3bQ3ULL6 Gm12504-202ENSMUST00000148026 306 ntBASIC6.91□□□□□ -1.3
Upf3bQ3ULL6 Gm21970-201ENSMUST00000160764 884 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
Upf3bQ3ULL6 Gm26671-201ENSMUST00000180423 1157 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Upf3bQ3ULL6 Mir6367-201ENSMUST00000183385 102 ntBASIC6.91□□□□□ -1.3
Upf3bQ3ULL6 Gm29483-201ENSMUST00000188188 1078 ntTSL 3 BASIC6.91□□□□□ -1.3
Upf3bQ3ULL6 Gm6525-201ENSMUST00000193882 1029 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
Upf3bQ3ULL6 Csde1-206ENSMUST00000197488 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
Upf3bQ3ULL6 Gm43241-201ENSMUST00000198375 364 ntTSL 3 BASIC6.91□□□□□ -1.3
Upf3bQ3ULL6 Gm7351-201ENSMUST00000210745 580 ntBASIC6.91□□□□□ -1.3
Upf3bQ3ULL6 4933433N18Rik-201ENSMUST00000222134 1220 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Upf3bQ3ULL6 1700019A02Rik-201ENSMUST00000072235 646 ntAPPRIS P2 TSL 1 (best) BASIC6.91□□□□□ -1.3
Upf3bQ3ULL6 Olfr933-201ENSMUST00000075680 1003 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
Upf3bQ3ULL6 Gm17728-201ENSMUST00000076982 399 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
Upf3bQ3ULL6 Sytl4-203ENSMUST00000113297 3306 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Upf3bQ3ULL6 Gm37254-201ENSMUST00000193542 3901 ntBASIC6.91□□□□□ -1.3
Upf3bQ3ULL6 Oat-rs1-201ENSMUST00000122186 1311 ntBASIC6.91□□□□□ -1.3
Upf3bQ3ULL6 Idh3a-201ENSMUST00000167866 2403 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Upf3bQ3ULL6 Phxr4-202ENSMUST00000216590 1391 ntBASIC6.91□□□□□ -1.3
Upf3bQ3ULL6 Cwf19l1-201ENSMUST00000026218 3574 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Upf3bQ3ULL6 Ankfy1-206ENSMUST00000155998 8030 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Upf3bQ3ULL6 Fmn1-201ENSMUST00000081349 4235 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
Upf3bQ3ULL6 4930568G15Rik-201ENSMUST00000193317 3218 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Upf3bQ3ULL6 Mgam-206ENSMUST00000202779 3821 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
Upf3bQ3ULL6 Ddr2-205ENSMUST00000194690 8590 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
Upf3bQ3ULL6 Tmod2-206ENSMUST00000215036 1797 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Upf3bQ3ULL6 Vangl1-202ENSMUST00000159388 3207 ntTSL 5 BASIC6.9□□□□□ -1.3
Upf3bQ3ULL6 Vmn1r176-203ENSMUST00000226767 2536 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
Upf3bQ3ULL6 Vmn1r176-205ENSMUST00000227661 2507 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
Upf3bQ3ULL6 Vmn1r176-206ENSMUST00000228280 2532 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
Upf3bQ3ULL6 Gm14245-201ENSMUST00000118939 1843 ntBASIC6.9□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 162.5 ms