Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 AC153975.1-201ENSMUST00000220087 926 ntBASIC7.5□□□□□ -1.21
Sox1P53783 CT033778.1-201ENSMUST00000224767 767 ntBASIC7.5□□□□□ -1.21
Sox1P53783 CT009515.3-201ENSMUST00000226509 671 ntBASIC7.5□□□□□ -1.21
Sox1P53783 AC110380.1-201ENSMUST00000226987 389 ntBASIC7.5□□□□□ -1.21
Sox1P53783 Gm9788-201ENSMUST00000057038 906 ntBASIC7.5□□□□□ -1.21
Sox1P53783 Olfr805-201ENSMUST00000078876 960 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
Sox1P53783 Olfr1129-201ENSMUST00000081034 945 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
Sox1P53783 Olfr1221-201ENSMUST00000099795 936 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
Sox1P53783 Slc5a7-201ENSMUST00000095712 5176 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Sox1P53783 Tbc1d5-201ENSMUST00000024717 5435 ntAPPRIS P2 TSL 1 (best) BASIC7.5□□□□□ -1.21
Sox1P53783 Pcdh15-228ENSMUST00000152819 2867 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Sox1P53783 Zfp207-208ENSMUST00000188489 2898 ntAPPRIS ALT1 TSL 2 BASIC7.5□□□□□ -1.21
Sox1P53783 Gm26945-201ENSMUST00000183191 2011 ntBASIC7.5□□□□□ -1.21
Sox1P53783 Nolc1-201ENSMUST00000165017 3634 ntAPPRIS P2 TSL 1 (best) BASIC7.5□□□□□ -1.21
Sox1P53783 Cep170-215ENSMUST00000195717 6967 ntAPPRIS P2 TSL 5 BASIC7.5□□□□□ -1.21
Sox1P53783 Zkscan5-202ENSMUST00000085671 3794 ntAPPRIS P3 TSL 1 (best) BASIC7.5□□□□□ -1.21
Sox1P53783 Tmem45a2-203ENSMUST00000227043 1447 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
Sox1P53783 Mmp27-201ENSMUST00000120900 1662 ntAPPRIS P2 TSL 1 (best) BASIC7.5□□□□□ -1.21
Sox1P53783 Gm44802-201ENSMUST00000208026 1916 ntBASIC7.5□□□□□ -1.21
Sox1P53783 Pdzd9-201ENSMUST00000033178 2180 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Sox1P53783 Zfyve9-201ENSMUST00000042185 2170 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Sox1P53783 Tmc2-202ENSMUST00000166774 2667 ntAPPRIS P1 TSL 2 BASIC7.5□□□□□ -1.21
Sox1P53783 Gm39323-201ENSMUST00000215913 2942 ntTSL 5 BASIC7.5□□□□□ -1.21
Sox1P53783 Specc1-203ENSMUST00000108709 6843 ntAPPRIS ALT2 TSL 5 BASIC7.5□□□□□ -1.21
Sox1P53783 Camk2d-205ENSMUST00000106401 3059 ntTSL 5 BASIC7.5□□□□□ -1.21
Sox1P53783 Olfr1241-202ENSMUST00000214743 2328 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
Sox1P53783 Gapt-201ENSMUST00000058806 2069 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Sox1P53783 Elmod2-206ENSMUST00000177594 4704 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Sox1P53783 Gm26645-201ENSMUST00000181076 1316 ntBASIC7.5□□□□□ -1.21
Sox1P53783 Slitrk4-201ENSMUST00000069926 8494 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Sox1P53783 Erc1-210ENSMUST00000184864 5428 ntAPPRIS ALT1 TSL 5 BASIC7.49□□□□□ -1.21
Sox1P53783 Hnrnpa3-203ENSMUST00000111962 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC7.49□□□□□ -1.21
Sox1P53783 Kntc1-201ENSMUST00000031366 6961 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Sox1P53783 Gm10778-201ENSMUST00000105315 1497 ntTSL 5 BASIC7.49□□□□□ -1.21
Sox1P53783 Gm4767-201ENSMUST00000099439 1497 ntTSL 5 BASIC7.49□□□□□ -1.21
Sox1P53783 Gpbp1-202ENSMUST00000091236 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC7.49□□□□□ -1.21
Sox1P53783 Zik1-201ENSMUST00000032551 4199 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Sox1P53783 Cacnb2-214ENSMUST00000193800 2117 ntAPPRIS P3 TSL 1 (best) BASIC7.49□□□□□ -1.21
Sox1P53783 Gm16204-201ENSMUST00000117864 1897 ntBASIC7.49□□□□□ -1.21
Sox1P53783 Fmr1-202ENSMUST00000114653 4058 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Sox1P53783 Supt7l-204ENSMUST00000201769 2548 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Sox1P53783 Sox6-206ENSMUST00000205405 2903 ntAPPRIS ALT2 TSL 5 BASIC7.49□□□□□ -1.21
Sox1P53783 Tdrd1-201ENSMUST00000078723 4887 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Sox1P53783 Gm6878-201ENSMUST00000100448 2018 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Sox1P53783 Spc25-201ENSMUST00000005365 1352 ntAPPRIS ALT2 TSL 1 (best) BASIC7.49□□□□□ -1.21
Sox1P53783 Trappc8-201ENSMUST00000025177 5178 ntAPPRIS ALT2 TSL 5 BASIC7.49□□□□□ -1.21
Sox1P53783 Pfkfb2-203ENSMUST00000169659 2849 ntAPPRIS P3 TSL 1 (best) BASIC7.49□□□□□ -1.21
Sox1P53783 A330008L17Rik-201ENSMUST00000064349 3220 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Sox1P53783 Phf3-205ENSMUST00000186733 7567 ntAPPRIS P1 TSL 5 BASIC7.49□□□□□ -1.21
Sox1P53783 Gm29091-201ENSMUST00000187289 2159 ntTSL 5 BASIC7.49□□□□□ -1.21
Sox1P53783 4933406J09Rik-201ENSMUST00000203352 1505 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Sox1P53783 Gbp8-201ENSMUST00000031235 2459 ntAPPRIS P1 TSL 5 BASIC7.49□□□□□ -1.21
Sox1P53783 Gm34653-201ENSMUST00000201786 1658 ntAPPRIS P1 TSL 5 BASIC7.49□□□□□ -1.21
Sox1P53783 Tardbp-205ENSMUST00000105700 923 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Sox1P53783 Lrrc69-202ENSMUST00000108276 1210 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Sox1P53783 Mir466j-201ENSMUST00000116876 122 ntBASIC7.49□□□□□ -1.21
Sox1P53783 Gm12393-201ENSMUST00000117084 848 ntBASIC7.49□□□□□ -1.21
Sox1P53783 Gm11533-201ENSMUST00000120287 477 ntBASIC7.49□□□□□ -1.21
Sox1P53783 Olfr405-ps1-201ENSMUST00000120649 936 ntBASIC7.49□□□□□ -1.21
Sox1P53783 Gm12596-201ENSMUST00000124589 673 ntTSL 3 BASIC7.49□□□□□ -1.21
Sox1P53783 Gm11415-201ENSMUST00000128214 480 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Sox1P53783 Gm12655-202ENSMUST00000133884 925 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Sox1P53783 Gm23533-201ENSMUST00000157540 245 ntBASIC7.49□□□□□ -1.21
Sox1P53783 Gm23022-201ENSMUST00000158768 180 ntBASIC7.49□□□□□ -1.21
Sox1P53783 Gm11107-201ENSMUST00000165414 505 ntBASIC7.49□□□□□ -1.21
Sox1P53783 Mir3090-201ENSMUST00000175597 87 ntBASIC7.49□□□□□ -1.21
Sox1P53783 Gm6526-202ENSMUST00000179860 591 ntAPPRIS ALT2 TSL 5 BASIC7.49□□□□□ -1.21
Sox1P53783 Gm5798-202ENSMUST00000179987 582 ntTSL 3 BASIC7.49□□□□□ -1.21
Sox1P53783 Gm22917-201ENSMUST00000180116 110 ntBASIC7.49□□□□□ -1.21
Sox1P53783 1700109K24Rik-201ENSMUST00000181870 1045 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Sox1P53783 1700003C15Rik-201ENSMUST00000185360 1224 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Sox1P53783 Gm29337-201ENSMUST00000185425 284 ntTSL 3 BASIC7.49□□□□□ -1.21
Sox1P53783 2010005H15Rik-202ENSMUST00000187183 639 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Sox1P53783 Gm37581-201ENSMUST00000192371 988 ntBASIC7.49□□□□□ -1.21
Sox1P53783 Gm42753-201ENSMUST00000196718 1268 ntBASIC7.49□□□□□ -1.21
Sox1P53783 Igkv13-73-1-201ENSMUST00000196767 200 ntBASIC7.49□□□□□ -1.21
Sox1P53783 Gm30517-201ENSMUST00000197350 772 ntBASIC7.49□□□□□ -1.21
Sox1P53783 1700028E10Rik-204ENSMUST00000201853 767 ntTSL 5 BASIC7.49□□□□□ -1.21
Sox1P53783 Gm44432-201ENSMUST00000203342 938 ntBASIC7.49□□□□□ -1.21
Sox1P53783 Gm44192-201ENSMUST00000204195 556 ntBASIC7.49□□□□□ -1.21
Sox1P53783 Gm9367-201ENSMUST00000205703 546 ntBASIC7.49□□□□□ -1.21
Sox1P53783 Gm29154-209ENSMUST00000213614 878 ntTSL 5 BASIC7.49□□□□□ -1.21
Sox1P53783 AL772265.1-201ENSMUST00000214379 305 ntBASIC7.49□□□□□ -1.21
Sox1P53783 AC166358.9-201ENSMUST00000220653 375 ntBASIC7.49□□□□□ -1.21
Sox1P53783 AC124356.2-201ENSMUST00000221874 336 ntBASIC7.49□□□□□ -1.21
Sox1P53783 CT010480.3-201ENSMUST00000224712 259 ntBASIC7.49□□□□□ -1.21
Sox1P53783 AL669819.1-201ENSMUST00000225143 330 ntBASIC7.49□□□□□ -1.21
Sox1P53783 Olfr491-201ENSMUST00000053179 933 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
Sox1P53783 Olfr731-201ENSMUST00000059565 981 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
Sox1P53783 Gm14851-201ENSMUST00000077452 351 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Sox1P53783 Reg1-201ENSMUST00000079926 769 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Sox1P53783 Gm25739-201ENSMUST00000082886 107 ntBASIC7.49□□□□□ -1.21
Sox1P53783 Ube2c-202ENSMUST00000088248 967 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Sox1P53783 Olfr1132-201ENSMUST00000090711 927 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
Sox1P53783 Olfr654-201ENSMUST00000098173 1155 ntBASIC7.49□□□□□ -1.21
Sox1P53783 Bglap2-201ENSMUST00000098956 471 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Sox1P53783 Oacyl-201ENSMUST00000115097 3431 ntAPPRIS P2 TSL 1 (best) BASIC7.49□□□□□ -1.21
Sox1P53783 Prom1-202ENSMUST00000074113 3966 ntAPPRIS ALT2 TSL 1 (best) BASIC7.49□□□□□ -1.21
Sox1P53783 Pcdh19-203ENSMUST00000167944 8407 ntAPPRIS ALT2 TSL 5 BASIC7.49□□□□□ -1.21
Sox1P53783 Srek1ip1-201ENSMUST00000022230 2365 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms