Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Gm7982-201ENSMUST00000101011 1443 ntAPPRIS ALT2 TSL 5 BASIC7.82□□□□□ -1.16
Ccdc9Q8VC31 Gm6351-201ENSMUST00000101021 1443 ntAPPRIS ALT2 TSL 5 BASIC7.82□□□□□ -1.16
Ccdc9Q8VC31 Gm12344-201ENSMUST00000117087 329 ntBASIC7.82□□□□□ -1.16
Ccdc9Q8VC31 Gm7821-201ENSMUST00000117111 788 ntBASIC7.82□□□□□ -1.16
Ccdc9Q8VC31 Gm11188-201ENSMUST00000122382 388 ntBASIC7.82□□□□□ -1.16
Ccdc9Q8VC31 Gm13840-201ENSMUST00000149608 256 ntTSL 2 BASIC7.82□□□□□ -1.16
Ccdc9Q8VC31 Gm23027-201ENSMUST00000158771 158 ntBASIC7.82□□□□□ -1.16
Ccdc9Q8VC31 Gm18953-201ENSMUST00000175694 300 ntBASIC7.82□□□□□ -1.16
Ccdc9Q8VC31 Gm26570-201ENSMUST00000180672 342 ntBASIC7.82□□□□□ -1.16
Ccdc9Q8VC31 Ets1-205ENSMUST00000184364 678 ntTSL 5 BASIC7.82□□□□□ -1.16
Ccdc9Q8VC31 1810022K09Rik-202ENSMUST00000185384 435 ntAPPRIS P3 TSL 1 (best) BASIC7.82□□□□□ -1.16
Ccdc9Q8VC31 9430002A10Rik-202ENSMUST00000185395 475 ntBASIC7.82□□□□□ -1.16
Ccdc9Q8VC31 Gm28512-201ENSMUST00000187415 762 ntTSL 3 BASIC7.82□□□□□ -1.16
Ccdc9Q8VC31 Gm28341-201ENSMUST00000190883 472 ntBASIC7.82□□□□□ -1.16
Ccdc9Q8VC31 Gm34816-201ENSMUST00000193363 502 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Ccdc9Q8VC31 Gm37285-201ENSMUST00000194465 1139 ntBASIC7.82□□□□□ -1.16
Ccdc9Q8VC31 Gm38328-201ENSMUST00000195582 317 ntBASIC7.82□□□□□ -1.16
Ccdc9Q8VC31 Gm42707-202ENSMUST00000196668 618 ntTSL 3 BASIC7.82□□□□□ -1.16
Ccdc9Q8VC31 1700094M24Rik-201ENSMUST00000203771 665 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Ccdc9Q8VC31 4930434F21Rik-201ENSMUST00000214381 742 ntTSL 5 BASIC7.82□□□□□ -1.16
Ccdc9Q8VC31 AC154472.2-201ENSMUST00000221186 288 ntTSL 5 BASIC7.82□□□□□ -1.16
Ccdc9Q8VC31 AV026068-237ENSMUST00000226075 572 ntBASIC7.82□□□□□ -1.16
Ccdc9Q8VC31 AC131710.2-201ENSMUST00000226773 683 ntBASIC7.82□□□□□ -1.16
Ccdc9Q8VC31 Olfr1387-201ENSMUST00000073824 936 ntAPPRIS P1 BASIC7.82□□□□□ -1.16
Ccdc9Q8VC31 Olfr586-201ENSMUST00000084811 954 ntAPPRIS P2 BASIC7.82□□□□□ -1.16
Ccdc9Q8VC31 Gm7682-201ENSMUST00000098289 1443 ntAPPRIS ALT2 TSL 5 BASIC7.82□□□□□ -1.16
Ccdc9Q8VC31 Gm42697-201ENSMUST00000198992 4092 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Ccdc9Q8VC31 Cfap70-203ENSMUST00000056073 3615 ntAPPRIS P4 TSL 1 (best) BASIC7.82□□□□□ -1.16
Ccdc9Q8VC31 Gm44697-201ENSMUST00000207756 1679 ntBASIC7.82□□□□□ -1.16
Ccdc9Q8VC31 Olfr432-202ENSMUST00000213211 4435 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
Ccdc9Q8VC31 Gm38325-201ENSMUST00000194507 1377 ntBASIC7.82□□□□□ -1.16
Ccdc9Q8VC31 Vmn2r44-201ENSMUST00000166499 3660 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
Ccdc9Q8VC31 Olfr1389-203ENSMUST00000217595 3549 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
Ccdc9Q8VC31 Gm45183-201ENSMUST00000207937 1497 ntBASIC7.81□□□□□ -1.16
Ccdc9Q8VC31 Casp1-201ENSMUST00000027015 1497 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Ccdc9Q8VC31 Sirpb1c-201ENSMUST00000050623 1499 ntAPPRIS P2 TSL 1 (best) BASIC7.81□□□□□ -1.16
Ccdc9Q8VC31 Gm21985-201ENSMUST00000141047 4532 ntAPPRIS P1 TSL 2 BASIC7.81□□□□□ -1.16
Ccdc9Q8VC31 Iqca-207ENSMUST00000212394 2574 ntAPPRIS ALT2 TSL 5 BASIC7.81□□□□□ -1.16
Ccdc9Q8VC31 Gm2539-201ENSMUST00000180720 2411 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Ccdc9Q8VC31 Dgkb-203ENSMUST00000220990 4085 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Ccdc9Q8VC31 Gm43627-201ENSMUST00000197119 2299 ntBASIC7.81□□□□□ -1.16
Ccdc9Q8VC31 Shprh-202ENSMUST00000054814 7225 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
Ccdc9Q8VC31 Gm38372-201ENSMUST00000194854 4028 ntBASIC7.81□□□□□ -1.16
Ccdc9Q8VC31 Gm38126-201ENSMUST00000195297 4003 ntBASIC7.81□□□□□ -1.16
Ccdc9Q8VC31 Spp1-201ENSMUST00000031243 1410 ntAPPRIS P3 TSL 1 (best) BASIC7.81□□□□□ -1.16
Ccdc9Q8VC31 Olfr1293-ps-201ENSMUST00000102551 888 ntAPPRIS ALT2 BASIC7.81□□□□□ -1.16
Ccdc9Q8VC31 Mir763-201ENSMUST00000103249 120 ntBASIC7.81□□□□□ -1.16
Ccdc9Q8VC31 Gm25725-201ENSMUST00000104528 130 ntBASIC7.81□□□□□ -1.16
Ccdc9Q8VC31 Gm15484-201ENSMUST00000118871 828 ntBASIC7.81□□□□□ -1.16
Ccdc9Q8VC31 4931428L18Rik-201ENSMUST00000127775 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
Ccdc9Q8VC31 4930599N23Rik-201ENSMUST00000146981 880 ntTSL 2 BASIC7.81□□□□□ -1.16
Ccdc9Q8VC31 Gm8624-202ENSMUST00000165677 669 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Ccdc9Q8VC31 Gm15056-202ENSMUST00000167686 314 ntAPPRIS P2 TSL 5 BASIC7.81□□□□□ -1.16
Ccdc9Q8VC31 Dctd-205ENSMUST00000174278 799 ntAPPRIS P1 TSL 3 BASIC7.81□□□□□ -1.16
Ccdc9Q8VC31 Gm22690-201ENSMUST00000175054 110 ntBASIC7.81□□□□□ -1.16
Ccdc9Q8VC31 Crnde-205ENSMUST00000179400 651 ntTSL 2 BASIC7.81□□□□□ -1.16
Ccdc9Q8VC31 Gm37581-201ENSMUST00000192371 988 ntBASIC7.81□□□□□ -1.16
Ccdc9Q8VC31 Ighv1-38-201ENSMUST00000192755 349 ntBASIC7.81□□□□□ -1.16
Ccdc9Q8VC31 2610034O05Rik-201ENSMUST00000194078 855 ntBASIC7.81□□□□□ -1.16
Ccdc9Q8VC31 9430087B13Rik-201ENSMUST00000196548 1085 ntBASIC7.81□□□□□ -1.16
Ccdc9Q8VC31 Gm43346-201ENSMUST00000198290 685 ntTSL 2 BASIC7.81□□□□□ -1.16
Ccdc9Q8VC31 Gm43558-201ENSMUST00000200155 210 ntBASIC7.81□□□□□ -1.16
Ccdc9Q8VC31 E230032D23Rik-203ENSMUST00000208797 856 ntBASIC7.81□□□□□ -1.16
Ccdc9Q8VC31 Gm7392-201ENSMUST00000217815 345 ntBASIC7.81□□□□□ -1.16
Ccdc9Q8VC31 RMST_1.1-213ENSMUST00000220288 792 ntTSL 5 BASIC7.81□□□□□ -1.16
Ccdc9Q8VC31 Asah2-201ENSMUST00000096119 4682 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
Ccdc9Q8VC31 Slco6b1-202ENSMUST00000178359 1778 ntBASIC7.81□□□□□ -1.16
Ccdc9Q8VC31 Gm26945-201ENSMUST00000183191 2011 ntBASIC7.81□□□□□ -1.16
Ccdc9Q8VC31 Olfr491-203ENSMUST00000214605 2136 ntAPPRIS P1 TSL 2 BASIC7.81□□□□□ -1.16
Ccdc9Q8VC31 Krit1-202ENSMUST00000171023 5582 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Ccdc9Q8VC31 Il22ra2-201ENSMUST00000036564 2498 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Ccdc9Q8VC31 AC122769.3-201ENSMUST00000227739 3245 ntBASIC7.8□□□□□ -1.16
Ccdc9Q8VC31 Dmtf1-202ENSMUST00000095017 3498 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Ccdc9Q8VC31 Gm9519-201ENSMUST00000206108 1337 ntBASIC7.8□□□□□ -1.16
Ccdc9Q8VC31 Gm35066-201ENSMUST00000198898 2074 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Ccdc9Q8VC31 Hspa9-ps1-201ENSMUST00000119602 1933 ntBASIC7.8□□□□□ -1.16
Ccdc9Q8VC31 Herc2-202ENSMUST00000164095 15261 ntAPPRIS P2 TSL 1 (best) BASIC7.8□□□□□ -1.16
Ccdc9Q8VC31 Eif3e-201ENSMUST00000022960 1506 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Ccdc9Q8VC31 Eif2s3x-202ENSMUST00000113922 1103 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Ccdc9Q8VC31 Rhox3c-201ENSMUST00000115188 1053 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
Ccdc9Q8VC31 Mir669e-201ENSMUST00000117003 119 ntBASIC7.8□□□□□ -1.16
Ccdc9Q8VC31 Gm7803-201ENSMUST00000117176 1015 ntBASIC7.8□□□□□ -1.16
Ccdc9Q8VC31 Gm6491-201ENSMUST00000118273 990 ntBASIC7.8□□□□□ -1.16
Ccdc9Q8VC31 Gm14584-201ENSMUST00000118956 637 ntBASIC7.8□□□□□ -1.16
Ccdc9Q8VC31 Gm2199-201ENSMUST00000119065 874 ntBASIC7.8□□□□□ -1.16
Ccdc9Q8VC31 Dnase1-202ENSMUST00000120009 1286 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Ccdc9Q8VC31 Gm7700-201ENSMUST00000120273 970 ntBASIC7.8□□□□□ -1.16
Ccdc9Q8VC31 Gm23954-201ENSMUST00000157213 353 ntBASIC7.8□□□□□ -1.16
Ccdc9Q8VC31 AI480526-201ENSMUST00000159072 957 ntTSL 2 BASIC7.8□□□□□ -1.16
Ccdc9Q8VC31 Gm15740-201ENSMUST00000159703 1292 ntBASIC7.8□□□□□ -1.16
Ccdc9Q8VC31 Olfr819-201ENSMUST00000167974 963 ntAPPRIS P2 BASIC7.8□□□□□ -1.16
Ccdc9Q8VC31 Olfr247-201ENSMUST00000170920 963 ntAPPRIS ALT2 BASIC7.8□□□□□ -1.16
Ccdc9Q8VC31 Gm3585-201ENSMUST00000173438 875 ntBASIC7.8□□□□□ -1.16
Ccdc9Q8VC31 Mir3072-201ENSMUST00000175610 83 ntBASIC7.8□□□□□ -1.16
Ccdc9Q8VC31 Dnah7c-201ENSMUST00000178395 612 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Ccdc9Q8VC31 2010005H15Rik-202ENSMUST00000187183 639 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Ccdc9Q8VC31 Gm29355-201ENSMUST00000188178 697 ntBASIC7.8□□□□□ -1.16
Ccdc9Q8VC31 Gm29008-201ENSMUST00000189387 298 ntBASIC7.8□□□□□ -1.16
Ccdc9Q8VC31 Gm20788-201ENSMUST00000190538 697 ntBASIC7.8□□□□□ -1.16
Ccdc9Q8VC31 Gm28644-201ENSMUST00000191364 585 ntTSL 2 BASIC7.8□□□□□ -1.16
Retrieved 100 of 76,532 protein–RNA pairs in 184 ms