Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Glmp-209ENSMUST00000177005 4219 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Trim47Q8C0E3 Pex5l-211ENSMUST00000194016 4206 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Trim47Q8C0E3 Gm28824-201ENSMUST00000187496 2167 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Trim47Q8C0E3 Gm28948-201ENSMUST00000188447 2167 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Trim47Q8C0E3 Gm29472-201ENSMUST00000188599 2167 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Trim47Q8C0E3 Gm28561-201ENSMUST00000189366 2167 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Trim47Q8C0E3 Gm28732-201ENSMUST00000189632 2167 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Trim47Q8C0E3 Gm38136-201ENSMUST00000194775 2167 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Trim47Q8C0E3 Gm38296-201ENSMUST00000195205 2167 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Trim47Q8C0E3 Jcad-201ENSMUST00000037029 6730 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
Trim47Q8C0E3 Ifit3-201ENSMUST00000102825 1745 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Trim47Q8C0E3 Gm26563-201ENSMUST00000181003 1704 ntTSL 5 BASIC8.38□□□□□ -1.07
Trim47Q8C0E3 Narf-201ENSMUST00000103015 4395 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Trim47Q8C0E3 AC190403.1-201ENSMUST00000224515 1325 ntBASIC8.38□□□□□ -1.07
Trim47Q8C0E3 Olfr523-206ENSMUST00000216023 3940 ntAPPRIS ALT2 TSL 5 BASIC8.38□□□□□ -1.07
Trim47Q8C0E3 Tbx20-201ENSMUST00000052946 9091 ntAPPRIS P3 TSL 1 (best) BASIC8.38□□□□□ -1.07
Trim47Q8C0E3 Gm19719-201ENSMUST00000200934 4230 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Trim47Q8C0E3 Gm25593-201ENSMUST00000102272 96 ntBASIC8.38□□□□□ -1.07
Trim47Q8C0E3 Gm13030-201ENSMUST00000105805 655 ntAPPRIS P1 TSL 3 BASIC8.38□□□□□ -1.07
Trim47Q8C0E3 Gm13579-201ENSMUST00000118519 517 ntBASIC8.38□□□□□ -1.07
Trim47Q8C0E3 Gm15665-201ENSMUST00000119116 847 ntBASIC8.38□□□□□ -1.07
Trim47Q8C0E3 H3f3a-ps1-201ENSMUST00000119546 410 ntBASIC8.38□□□□□ -1.07
Trim47Q8C0E3 Gm15481-201ENSMUST00000120264 539 ntBASIC8.38□□□□□ -1.07
Trim47Q8C0E3 Gm13622-201ENSMUST00000120658 433 ntBASIC8.38□□□□□ -1.07
Trim47Q8C0E3 Gm15792-201ENSMUST00000137099 769 ntTSL 3 BASIC8.38□□□□□ -1.07
Trim47Q8C0E3 Gm10157-201ENSMUST00000139408 343 ntBASIC8.38□□□□□ -1.07
Trim47Q8C0E3 Gm15507-203ENSMUST00000140958 658 ntTSL 3 BASIC8.38□□□□□ -1.07
Trim47Q8C0E3 Plxna4os3-202ENSMUST00000143328 277 ntTSL 3 BASIC8.38□□□□□ -1.07
Trim47Q8C0E3 Fpr2-202ENSMUST00000149944 883 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Trim47Q8C0E3 Gm23392-201ENSMUST00000157580 113 ntBASIC8.38□□□□□ -1.07
Trim47Q8C0E3 Gm22158-201ENSMUST00000158411 126 ntBASIC8.38□□□□□ -1.07
Trim47Q8C0E3 Gm22206-201ENSMUST00000158612 116 ntBASIC8.38□□□□□ -1.07
Trim47Q8C0E3 Gm16094-201ENSMUST00000162784 427 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Trim47Q8C0E3 Vmn1r-ps59-201ENSMUST00000172698 199 ntBASIC8.38□□□□□ -1.07
Trim47Q8C0E3 Znrf1-215ENSMUST00000174454 494 ntTSL 3 BASIC8.38□□□□□ -1.07
Trim47Q8C0E3 1700022N22Rik-201ENSMUST00000180932 709 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Trim47Q8C0E3 Gm21181-201ENSMUST00000186249 330 ntBASIC8.38□□□□□ -1.07
Trim47Q8C0E3 Olfr1246-201ENSMUST00000187990 1078 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
Trim47Q8C0E3 Mrgpra14-201ENSMUST00000189782 913 ntBASIC8.38□□□□□ -1.07
Trim47Q8C0E3 Gm28586-201ENSMUST00000189857 456 ntBASIC8.38□□□□□ -1.07
Trim47Q8C0E3 Gm28803-201ENSMUST00000190385 764 ntBASIC8.38□□□□□ -1.07
Trim47Q8C0E3 Gm37946-201ENSMUST00000192064 347 ntBASIC8.38□□□□□ -1.07
Trim47Q8C0E3 Gm34302-201ENSMUST00000192926 243 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
Trim47Q8C0E3 D13Ertd608e-202ENSMUST00000195797 704 ntAPPRIS P5 TSL 1 (best) BASIC8.38□□□□□ -1.07
Trim47Q8C0E3 Gm33370-201ENSMUST00000195935 489 ntTSL 2 BASIC8.38□□□□□ -1.07
Trim47Q8C0E3 Lmo3-208ENSMUST00000203435 572 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
Trim47Q8C0E3 Gm38840-201ENSMUST00000204716 843 ntBASIC8.38□□□□□ -1.07
Trim47Q8C0E3 4930425L21Rik-202ENSMUST00000205073 871 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Trim47Q8C0E3 Gm44665-201ENSMUST00000205381 251 ntBASIC8.38□□□□□ -1.07
Trim47Q8C0E3 Gm30504-203ENSMUST00000209762 1048 ntTSL 5 BASIC8.38□□□□□ -1.07
Trim47Q8C0E3 Olfr1345-ps1-201ENSMUST00000210627 244 ntBASIC8.38□□□□□ -1.07
Trim47Q8C0E3 Gm45900-201ENSMUST00000211879 409 ntBASIC8.38□□□□□ -1.07
Trim47Q8C0E3 RMST_1.1-213ENSMUST00000220288 792 ntTSL 5 BASIC8.38□□□□□ -1.07
Trim47Q8C0E3 AC154382.1-201ENSMUST00000220958 1282 ntBASIC8.38□□□□□ -1.07
Trim47Q8C0E3 9130015A21Rik-202ENSMUST00000222153 837 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Trim47Q8C0E3 AC238940.2-201ENSMUST00000224202 330 ntBASIC8.38□□□□□ -1.07
Trim47Q8C0E3 Gm24613-201ENSMUST00000083266 130 ntBASIC8.38□□□□□ -1.07
Trim47Q8C0E3 Mir465-201ENSMUST00000093563 74 ntBASIC8.38□□□□□ -1.07
Trim47Q8C0E3 Olfr1305-201ENSMUST00000099608 939 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
Trim47Q8C0E3 Ube4a-204ENSMUST00000138559 3374 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Trim47Q8C0E3 Olfr460-202ENSMUST00000216942 3370 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
Trim47Q8C0E3 Tex14-201ENSMUST00000060835 4763 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
Trim47Q8C0E3 Ccdc141-202ENSMUST00000049544 8969 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Trim47Q8C0E3 9430034N14Rik-201ENSMUST00000193532 3785 ntBASIC8.38□□□□□ -1.07
Trim47Q8C0E3 Fbxw27-208ENSMUST00000212725 1483 ntAPPRIS ALT2 TSL 5 BASIC8.38□□□□□ -1.07
Trim47Q8C0E3 Ctxn3-201ENSMUST00000091892 1441 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Trim47Q8C0E3 Tmcc1-203ENSMUST00000172510 2612 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Trim47Q8C0E3 1700031F05Rik-201ENSMUST00000048061 1361 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Trim47Q8C0E3 Prps1l1-201ENSMUST00000134550 1676 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
Trim47Q8C0E3 Sorbs2-222ENSMUST00000141039 1699 ntTSL 5 BASIC8.37□□□□□ -1.07
Trim47Q8C0E3 Maml2-203ENSMUST00000177755 2264 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Trim47Q8C0E3 Frem3-201ENSMUST00000039695 6384 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
Trim47Q8C0E3 Retreg1-203ENSMUST00000226438 2783 ntBASIC8.37□□□□□ -1.07
Trim47Q8C0E3 Vmn2r12-201ENSMUST00000095922 2496 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
Trim47Q8C0E3 Ighv14-4-201ENSMUST00000103475 333 ntAPPRIS ALT2 BASIC8.37□□□□□ -1.07
Trim47Q8C0E3 Ighv7-4-201ENSMUST00000103477 360 ntAPPRIS ALT2 BASIC8.37□□□□□ -1.07
Trim47Q8C0E3 Gm23527-201ENSMUST00000104570 130 ntBASIC8.37□□□□□ -1.07
Trim47Q8C0E3 Gm11865-201ENSMUST00000118093 859 ntBASIC8.37□□□□□ -1.07
Trim47Q8C0E3 Gm12313-201ENSMUST00000121347 421 ntBASIC8.37□□□□□ -1.07
Trim47Q8C0E3 AI847159-203ENSMUST00000141786 915 ntTSL 2 BASIC8.37□□□□□ -1.07
Trim47Q8C0E3 Spanxn4-201ENSMUST00000172433 424 ntBASIC8.37□□□□□ -1.07
Trim47Q8C0E3 Gm5974-201ENSMUST00000181607 986 ntBASIC8.37□□□□□ -1.07
Trim47Q8C0E3 Gm5300-201ENSMUST00000182201 1003 ntBASIC8.37□□□□□ -1.07
Trim47Q8C0E3 Prl8a8-201ENSMUST00000018389 927 ntAPPRIS P3 TSL 1 (best) BASIC8.37□□□□□ -1.07
Trim47Q8C0E3 Gm28008-201ENSMUST00000184021 186 ntBASIC8.37□□□□□ -1.07
Trim47Q8C0E3 Olfr1391-201ENSMUST00000187509 938 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
Trim47Q8C0E3 Gm29008-201ENSMUST00000189387 298 ntBASIC8.37□□□□□ -1.07
Trim47Q8C0E3 5033404E19Rik-201ENSMUST00000192616 630 ntBASIC8.37□□□□□ -1.07
Trim47Q8C0E3 Gm39033-201ENSMUST00000209158 1021 ntTSL 5 BASIC8.37□□□□□ -1.07
Trim47Q8C0E3 Gm34533-201ENSMUST00000209249 552 ntTSL 5 BASIC8.37□□□□□ -1.07
Trim47Q8C0E3 Gm20946-201ENSMUST00000212367 461 ntBASIC8.37□□□□□ -1.07
Trim47Q8C0E3 CT033754.1-201ENSMUST00000216941 531 ntTSL 3 BASIC8.37□□□□□ -1.07
Trim47Q8C0E3 Olfr687-202ENSMUST00000218046 1004 ntTSL 5 BASIC8.37□□□□□ -1.07
Trim47Q8C0E3 Olfr638-202ENSMUST00000218325 1158 ntAPPRIS ALT2 TSL 5 BASIC8.37□□□□□ -1.07
Trim47Q8C0E3 CT030260.1-201ENSMUST00000223243 442 ntBASIC8.37□□□□□ -1.07
Trim47Q8C0E3 AC154487.1-201ENSMUST00000224649 226 ntBASIC8.37□□□□□ -1.07
Trim47Q8C0E3 Olfr905-201ENSMUST00000051111 937 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
Trim47Q8C0E3 Olfr430-201ENSMUST00000055873 954 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
Trim47Q8C0E3 Olfr779-201ENSMUST00000069063 390 ntAPPRIS ALT2 BASIC8.37□□□□□ -1.07
Trim47Q8C0E3 Gm24707-201ENSMUST00000082812 107 ntBASIC8.37□□□□□ -1.07
Retrieved 100 of 76,532 protein–RNA pairs in 66.8 ms