Protein–RNA interactions for Protein: Q9Z0G9

Cldn3, Claudin-3, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn3Q9Z0G9 Ctsr-201ENSMUST00000021889 1414 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Cldn3Q9Z0G9 Pramef8-201ENSMUST00000037356 3260 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Cldn3Q9Z0G9 Mtus1-201ENSMUST00000051379 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
Cldn3Q9Z0G9 Cfhr2-201ENSMUST00000094489 1609 ntAPPRIS P2 TSL 1 (best) BASIC6.58□□□□□ -1.36
Cldn3Q9Z0G9 CT009757.4-201ENSMUST00000221520 2541 ntBASIC6.57□□□□□ -1.36
Cldn3Q9Z0G9 Ogdh-202ENSMUST00000081894 4114 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Cldn3Q9Z0G9 Cntrl-204ENSMUST00000113033 1817 ntTSL 5 BASIC6.57□□□□□ -1.36
Cldn3Q9Z0G9 CT025675.1-201ENSMUST00000228171 1567 ntBASIC6.57□□□□□ -1.36
Cldn3Q9Z0G9 Prom1-208ENSMUST00000179059 3579 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
Cldn3Q9Z0G9 CT030181.1-201ENSMUST00000089534 3549 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Cldn3Q9Z0G9 Osbpl9-216ENSMUST00000161363 2356 ntTSL 5 BASIC6.57□□□□□ -1.36
Cldn3Q9Z0G9 Olfr1106-202ENSMUST00000213781 2569 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Cldn3Q9Z0G9 Olfr1106-203ENSMUST00000217650 2573 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Cldn3Q9Z0G9 Gm5546-201ENSMUST00000056145 2777 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Cldn3Q9Z0G9 Igkv6-14-201ENSMUST00000103394 347 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Cldn3Q9Z0G9 Gm25760-201ENSMUST00000103989 132 ntBASIC6.57□□□□□ -1.36
Cldn3Q9Z0G9 Spin2-ps2-201ENSMUST00000116186 778 ntBASIC6.57□□□□□ -1.36
Cldn3Q9Z0G9 Gm14513-201ENSMUST00000117403 123 ntBASIC6.57□□□□□ -1.36
Cldn3Q9Z0G9 Gm14489-201ENSMUST00000120868 901 ntBASIC6.57□□□□□ -1.36
Cldn3Q9Z0G9 0610043K17Rik-201ENSMUST00000123107 614 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Cldn3Q9Z0G9 Gm12827-201ENSMUST00000132690 660 ntTSL 3 BASIC6.57□□□□□ -1.36
Cldn3Q9Z0G9 Gm11545-201ENSMUST00000146507 375 ntBASIC6.57□□□□□ -1.36
Cldn3Q9Z0G9 Nudt12os-202ENSMUST00000152750 849 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Cldn3Q9Z0G9 Gm22604-201ENSMUST00000157604 311 ntBASIC6.57□□□□□ -1.36
Cldn3Q9Z0G9 Gm6611-201ENSMUST00000163830 1272 ntBASIC6.57□□□□□ -1.36
Cldn3Q9Z0G9 Gm6133-201ENSMUST00000164064 948 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Cldn3Q9Z0G9 Cldn34a-201ENSMUST00000164764 636 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Cldn3Q9Z0G9 4430402I18Rik-206ENSMUST00000164777 1066 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Cldn3Q9Z0G9 Gm17201-201ENSMUST00000167226 390 ntTSL 5 BASIC6.57□□□□□ -1.36
Cldn3Q9Z0G9 Gm17140-201ENSMUST00000169163 627 ntTSL 3 BASIC6.57□□□□□ -1.36
Cldn3Q9Z0G9 1110038B12Rik-201ENSMUST00000172501 579 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Cldn3Q9Z0G9 Gm6803-201ENSMUST00000178301 435 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Cldn3Q9Z0G9 Gm2075-201ENSMUST00000180285 435 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Cldn3Q9Z0G9 Rian-203ENSMUST00000181527 989 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Cldn3Q9Z0G9 Gm17847-201ENSMUST00000188261 1127 ntBASIC6.57□□□□□ -1.36
Cldn3Q9Z0G9 Gm9517-201ENSMUST00000195021 874 ntBASIC6.57□□□□□ -1.36
Cldn3Q9Z0G9 Gm43120-201ENSMUST00000196228 667 ntTSL 3 BASIC6.57□□□□□ -1.36
Cldn3Q9Z0G9 AC151967.1-201ENSMUST00000198146 76 ntBASIC6.57□□□□□ -1.36
Cldn3Q9Z0G9 Gm43176-201ENSMUST00000199653 2989 ntBASIC6.57□□□□□ -1.36
Cldn3Q9Z0G9 Gm43203-201ENSMUST00000200130 558 ntBASIC6.57□□□□□ -1.36
Cldn3Q9Z0G9 Gm36843-201ENSMUST00000209303 627 ntTSL 5 BASIC6.57□□□□□ -1.36
Cldn3Q9Z0G9 Gm45607-201ENSMUST00000211143 678 ntTSL 3 BASIC6.57□□□□□ -1.36
Cldn3Q9Z0G9 Olfr291-201ENSMUST00000211582 1159 ntAPPRIS P2 TSL 2 BASIC6.57□□□□□ -1.36
Cldn3Q9Z0G9 4930567H12Rik-201ENSMUST00000212260 955 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Cldn3Q9Z0G9 AC115793.1-201ENSMUST00000216605 215 ntBASIC6.57□□□□□ -1.36
Cldn3Q9Z0G9 AC133207.2-201ENSMUST00000218430 237 ntTSL 5 BASIC6.57□□□□□ -1.36
Cldn3Q9Z0G9 Gm2022-201ENSMUST00000220585 435 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Cldn3Q9Z0G9 Gm8607-201ENSMUST00000221864 431 ntBASIC6.57□□□□□ -1.36
Cldn3Q9Z0G9 AC124510.2-201ENSMUST00000221958 683 ntBASIC6.57□□□□□ -1.36
Cldn3Q9Z0G9 Zp4-ps-202ENSMUST00000222293 922 ntTSL 3 BASIC6.57□□□□□ -1.36
Cldn3Q9Z0G9 Gm9267-201ENSMUST00000222831 404 ntBASIC6.57□□□□□ -1.36
Cldn3Q9Z0G9 AC163667.1-201ENSMUST00000225201 1289 ntBASIC6.57□□□□□ -1.36
Cldn3Q9Z0G9 AC101205.1-201ENSMUST00000227916 907 ntBASIC6.57□□□□□ -1.36
Cldn3Q9Z0G9 Ear14-202ENSMUST00000228064 948 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Cldn3Q9Z0G9 Olfr424-201ENSMUST00000053941 948 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Cldn3Q9Z0G9 Gm17728-201ENSMUST00000076982 399 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Cldn3Q9Z0G9 Gm23238-201ENSMUST00000083007 164 ntBASIC6.57□□□□□ -1.36
Cldn3Q9Z0G9 Gm45001-201ENSMUST00000208279 2515 ntBASIC6.57□□□□□ -1.36
Cldn3Q9Z0G9 Gm26786-201ENSMUST00000180410 6243 ntTSL 5 BASIC6.57□□□□□ -1.36
Cldn3Q9Z0G9 Gm10610-202ENSMUST00000207184 2693 ntTSL 5 BASIC6.57□□□□□ -1.36
Cldn3Q9Z0G9 Iqch-201ENSMUST00000042322 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
Cldn3Q9Z0G9 Dclre1c-201ENSMUST00000061852 7075 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
Cldn3Q9Z0G9 Gm14976-201ENSMUST00000117055 1394 ntBASIC6.57□□□□□ -1.36
Cldn3Q9Z0G9 Slf1-201ENSMUST00000151524 3747 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Cldn3Q9Z0G9 Papolg-201ENSMUST00000020513 3747 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Cldn3Q9Z0G9 Htr2a-201ENSMUST00000036653 5606 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Cldn3Q9Z0G9 Lrp1-201ENSMUST00000049149 14888 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Cldn3Q9Z0G9 AC153971.1-201ENSMUST00000215097 3811 ntBASIC6.56□□□□□ -1.36
Cldn3Q9Z0G9 Gm18879-201ENSMUST00000221187 1537 ntBASIC6.56□□□□□ -1.36
Cldn3Q9Z0G9 Cnga1-202ENSMUST00000126799 2061 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Cldn3Q9Z0G9 Cavin4-201ENSMUST00000030033 2054 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Cldn3Q9Z0G9 Zfp719-201ENSMUST00000058104 4494 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Cldn3Q9Z0G9 Zfp607b-202ENSMUST00000120004 4612 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Cldn3Q9Z0G9 Helz-203ENSMUST00000106746 13147 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
Cldn3Q9Z0G9 Atp10b-201ENSMUST00000077659 6825 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Cldn3Q9Z0G9 Trim12a-203ENSMUST00000106839 1486 ntAPPRIS P2 TSL 1 (best) BASIC6.56□□□□□ -1.36
Cldn3Q9Z0G9 Ampd1-202ENSMUST00000155034 2913 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Cldn3Q9Z0G9 Ect2l-201ENSMUST00000095817 2900 ntAPPRIS P2 TSL 5 BASIC6.56□□□□□ -1.36
Cldn3Q9Z0G9 AC159196.3-201ENSMUST00000224307 1841 ntBASIC6.56□□□□□ -1.36
Cldn3Q9Z0G9 Trav8d-1-201ENSMUST00000103580 400 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Cldn3Q9Z0G9 Gm5843-201ENSMUST00000121631 476 ntBASIC6.56□□□□□ -1.36
Cldn3Q9Z0G9 2610204G07Rik-201ENSMUST00000131215 992 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Cldn3Q9Z0G9 1700047F07Rik-201ENSMUST00000140321 543 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Cldn3Q9Z0G9 Gm15239-201ENSMUST00000150690 603 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Cldn3Q9Z0G9 Gm15879-202ENSMUST00000150906 565 ntTSL 2 BASIC6.56□□□□□ -1.36
Cldn3Q9Z0G9 Gm8922-201ENSMUST00000170057 1167 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Cldn3Q9Z0G9 Gm23968-201ENSMUST00000175047 125 ntBASIC6.56□□□□□ -1.36
Cldn3Q9Z0G9 Gm22642-201ENSMUST00000175352 252 ntBASIC6.56□□□□□ -1.36
Cldn3Q9Z0G9 Gm5871-201ENSMUST00000176461 718 ntBASIC6.56□□□□□ -1.36
Cldn3Q9Z0G9 2310043O21Rik-201ENSMUST00000185323 622 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Cldn3Q9Z0G9 Gm29483-201ENSMUST00000188188 1078 ntTSL 3 BASIC6.56□□□□□ -1.36
Cldn3Q9Z0G9 Gm38256-201ENSMUST00000192097 950 ntTSL 5 BASIC6.56□□□□□ -1.36
Cldn3Q9Z0G9 Gm8454-201ENSMUST00000196980 811 ntBASIC6.56□□□□□ -1.36
Cldn3Q9Z0G9 1700028E10Rik-206ENSMUST00000202216 557 ntTSL 3 BASIC6.56□□□□□ -1.36
Cldn3Q9Z0G9 Klk1b12-ps-201ENSMUST00000206650 751 ntBASIC6.56□□□□□ -1.36
Cldn3Q9Z0G9 AC124489.3-201ENSMUST00000224037 278 ntBASIC6.56□□□□□ -1.36
Cldn3Q9Z0G9 AC122533.1-201ENSMUST00000225177 767 ntBASIC6.56□□□□□ -1.36
Cldn3Q9Z0G9 Prl3d3-201ENSMUST00000073601 856 ntAPPRIS P2 TSL 1 (best) BASIC6.56□□□□□ -1.36
Cldn3Q9Z0G9 Olfr644-201ENSMUST00000077417 1071 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Cldn3Q9Z0G9 Cryba1-201ENSMUST00000078623 778 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 69.5 ms