Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Esp36-202ENSMUST00000177882 1117 ntAPPRIS P2 TSL 1 (best) BASIC6.38□□□□□ -1.39
Cstf3Q99LI7 Trav6d-5-201ENSMUST00000180687 338 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Cstf3Q99LI7 1700028B04Rik-201ENSMUST00000186274 555 ntBASIC6.38□□□□□ -1.39
Cstf3Q99LI7 Gm9114-201ENSMUST00000188558 997 ntBASIC6.38□□□□□ -1.39
Cstf3Q99LI7 Gm29160-201ENSMUST00000190094 699 ntBASIC6.38□□□□□ -1.39
Cstf3Q99LI7 Gm29214-201ENSMUST00000190216 570 ntBASIC6.38□□□□□ -1.39
Cstf3Q99LI7 Gm42782-201ENSMUST00000197286 522 ntBASIC6.38□□□□□ -1.39
Cstf3Q99LI7 S100a6-203ENSMUST00000198128 464 ntAPPRIS P1 TSL 3 BASIC6.38□□□□□ -1.39
Cstf3Q99LI7 Gm7463-201ENSMUST00000201541 547 ntBASIC6.38□□□□□ -1.39
Cstf3Q99LI7 Gm18839-201ENSMUST00000204292 670 ntBASIC6.38□□□□□ -1.39
Cstf3Q99LI7 Rps12-ps4-201ENSMUST00000208689 397 ntBASIC6.38□□□□□ -1.39
Cstf3Q99LI7 Spata19-204ENSMUST00000214287 642 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
Cstf3Q99LI7 AC142113.2-201ENSMUST00000217425 748 ntBASIC6.38□□□□□ -1.39
Cstf3Q99LI7 Ldah-206ENSMUST00000218086 1159 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Cstf3Q99LI7 AC124184.1-201ENSMUST00000218167 283 ntBASIC6.38□□□□□ -1.39
Cstf3Q99LI7 Pln-203ENSMUST00000218468 760 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Cstf3Q99LI7 AC155709.1-201ENSMUST00000218794 162 ntBASIC6.38□□□□□ -1.39
Cstf3Q99LI7 Gm9472-201ENSMUST00000221625 526 ntBASIC6.38□□□□□ -1.39
Cstf3Q99LI7 AC133598.4-201ENSMUST00000224577 454 ntBASIC6.38□□□□□ -1.39
Cstf3Q99LI7 AC154361.1-201ENSMUST00000225694 745 ntBASIC6.38□□□□□ -1.39
Cstf3Q99LI7 AC154806.5-205ENSMUST00000228828 411 ntBASIC6.38□□□□□ -1.39
Cstf3Q99LI7 Cst8-201ENSMUST00000028931 768 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Cstf3Q99LI7 Rbp7-201ENSMUST00000030848 619 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Cstf3Q99LI7 Vmn1r179-201ENSMUST00000049819 972 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Cstf3Q99LI7 Olfr1501-201ENSMUST00000073966 948 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Cstf3Q99LI7 Gm28392-201ENSMUST00000077630 393 ntBASIC6.38□□□□□ -1.39
Cstf3Q99LI7 Hist1h2bb-201ENSMUST00000099703 508 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Cstf3Q99LI7 Uba1y-201ENSMUST00000115894 3981 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Cstf3Q99LI7 Gm13872-202ENSMUST00000143995 1408 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Cstf3Q99LI7 Gimd1-203ENSMUST00000212594 1432 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Cstf3Q99LI7 Zdhhc17-201ENSMUST00000041723 4548 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Cstf3Q99LI7 Krcc1-202ENSMUST00000168700 1749 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Cstf3Q99LI7 Matr3-205ENSMUST00000186796 1854 ntTSL 5 BASIC6.38□□□□□ -1.39
Cstf3Q99LI7 CT010577.1-202ENSMUST00000226187 1903 ntBASIC6.38□□□□□ -1.39
Cstf3Q99LI7 Sdcbp-202ENSMUST00000103008 2086 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
Cstf3Q99LI7 Olfr1047-202ENSMUST00000216056 2450 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Cstf3Q99LI7 Gm29825-201ENSMUST00000214237 3775 ntTSL 5 BASIC6.38□□□□□ -1.39
Cstf3Q99LI7 Zan-201ENSMUST00000117564 16481 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Cstf3Q99LI7 Gm19368-201ENSMUST00000221258 4424 ntBASIC6.37□□□□□ -1.39
Cstf3Q99LI7 Gm29461-201ENSMUST00000189232 4176 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Cstf3Q99LI7 Gm21663-201ENSMUST00000196214 2864 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Cstf3Q99LI7 Gm37967-201ENSMUST00000195634 2665 ntBASIC6.37□□□□□ -1.39
Cstf3Q99LI7 Cfap221-201ENSMUST00000037840 2511 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Cstf3Q99LI7 Olfr907-203ENSMUST00000214264 1910 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Cstf3Q99LI7 Pramel7-201ENSMUST00000026957 1861 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Cstf3Q99LI7 Thnsl1-203ENSMUST00000102952 1679 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Cstf3Q99LI7 Gm31520-202ENSMUST00000203574 1524 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Cstf3Q99LI7 Gm40893-201ENSMUST00000220507 1508 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Cstf3Q99LI7 AC153962.2-202ENSMUST00000219391 1382 ntTSL 5 BASIC6.37□□□□□ -1.39
Cstf3Q99LI7 Ckap5-202ENSMUST00000099716 6574 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Cstf3Q99LI7 Asxl3-201ENSMUST00000097655 11697 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Cstf3Q99LI7 Igkv12-38-201ENSMUST00000103371 344 ntAPPRIS ALT2 BASIC6.37□□□□□ -1.39
Cstf3Q99LI7 Klrd1-202ENSMUST00000112063 895 ntAPPRIS P2 TSL 1 (best) BASIC6.37□□□□□ -1.39
Cstf3Q99LI7 Gm12135-201ENSMUST00000119170 466 ntBASIC6.37□□□□□ -1.39
Cstf3Q99LI7 1700028P15Rik-202ENSMUST00000139894 856 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Cstf3Q99LI7 Gm12031-201ENSMUST00000156150 627 ntTSL 2 BASIC6.37□□□□□ -1.39
Cstf3Q99LI7 Gm23077-201ENSMUST00000157854 116 ntBASIC6.37□□□□□ -1.39
Cstf3Q99LI7 Gm22702-201ENSMUST00000175372 69 ntBASIC6.37□□□□□ -1.39
Cstf3Q99LI7 Trav12d-3-201ENSMUST00000177703 347 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Cstf3Q99LI7 Gm19791-201ENSMUST00000180398 859 ntBASIC6.37□□□□□ -1.39
Cstf3Q99LI7 4930471M09Rik-201ENSMUST00000181849 1112 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Cstf3Q99LI7 Dap-202ENSMUST00000185618 388 ntTSL 3 BASIC6.37□□□□□ -1.39
Cstf3Q99LI7 Gm17847-201ENSMUST00000188261 1127 ntBASIC6.37□□□□□ -1.39
Cstf3Q99LI7 Gm10640-202ENSMUST00000190947 1134 ntTSL 2 BASIC6.37□□□□□ -1.39
Cstf3Q99LI7 Igkv4-83-201ENSMUST00000196933 334 ntBASIC6.37□□□□□ -1.39
Cstf3Q99LI7 Gm43893-201ENSMUST00000203362 437 ntTSL 3 BASIC6.37□□□□□ -1.39
Cstf3Q99LI7 Gm21054-201ENSMUST00000203981 380 ntBASIC6.37□□□□□ -1.39
Cstf3Q99LI7 Pde6h-203ENSMUST00000204382 211 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Cstf3Q99LI7 Gm6145-202ENSMUST00000210292 787 ntTSL 5 BASIC6.37□□□□□ -1.39
Cstf3Q99LI7 AC153847.1-201ENSMUST00000214524 353 ntBASIC6.37□□□□□ -1.39
Cstf3Q99LI7 Gm32235-202ENSMUST00000220286 898 ntTSL 5 BASIC6.37□□□□□ -1.39
Cstf3Q99LI7 AC158536.1-201ENSMUST00000222510 256 ntBASIC6.37□□□□□ -1.39
Cstf3Q99LI7 Gm35619-201ENSMUST00000222548 600 ntBASIC6.37□□□□□ -1.39
Cstf3Q99LI7 AC138329.1-201ENSMUST00000225040 471 ntBASIC6.37□□□□□ -1.39
Cstf3Q99LI7 AC133958.1-201ENSMUST00000227085 961 ntBASIC6.37□□□□□ -1.39
Cstf3Q99LI7 Lalba-201ENSMUST00000023726 771 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Cstf3Q99LI7 Klrd1-201ENSMUST00000032268 586 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
Cstf3Q99LI7 Vmn1r76-201ENSMUST00000058772 975 ntAPPRIS P2 BASIC6.37□□□□□ -1.39
Cstf3Q99LI7 Slx-201ENSMUST00000096913 925 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Cstf3Q99LI7 Olfr1224-ps1-202ENSMUST00000099793 1212 ntAPPRIS P1 TSL 3 BASIC6.37□□□□□ -1.39
Cstf3Q99LI7 Pramef8-201ENSMUST00000037356 3260 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Cstf3Q99LI7 March1-208ENSMUST00000110259 3181 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Cstf3Q99LI7 Gm38105-201ENSMUST00000192112 2621 ntBASIC6.37□□□□□ -1.39
Cstf3Q99LI7 Gm38178-201ENSMUST00000194502 2471 ntBASIC6.37□□□□□ -1.39
Cstf3Q99LI7 Gm12299-201ENSMUST00000138819 2327 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Cstf3Q99LI7 Csde1-214ENSMUST00000199240 3457 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Cstf3Q99LI7 Olfr971-202ENSMUST00000214242 2027 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Cstf3Q99LI7 Nat8f2-201ENSMUST00000045008 3301 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Cstf3Q99LI7 Ect2-202ENSMUST00000108298 4024 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Cstf3Q99LI7 Bbx-203ENSMUST00000089404 4024 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
Cstf3Q99LI7 3000002C10Rik-203ENSMUST00000144161 3977 ntTSL 2 BASIC6.36□□□□□ -1.39
Cstf3Q99LI7 9930038B18Rik-201ENSMUST00000151816 3966 ntTSL 5 BASIC6.36□□□□□ -1.39
Cstf3Q99LI7 Gm37332-201ENSMUST00000195853 2844 ntBASIC6.36□□□□□ -1.39
Cstf3Q99LI7 Lcp1-209ENSMUST00000145303 3841 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Cstf3Q99LI7 Gm43363-201ENSMUST00000201590 2647 ntBASIC6.36□□□□□ -1.39
Cstf3Q99LI7 Klf7-202ENSMUST00000114086 7662 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Cstf3Q99LI7 Gm43789-201ENSMUST00000199275 2472 ntBASIC6.36□□□□□ -1.39
Cstf3Q99LI7 Rfx3-201ENSMUST00000046898 4274 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Cstf3Q99LI7 2610044O15Rik8-202ENSMUST00000186619 2337 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
Cstf3Q99LI7 Klhl13-203ENSMUST00000115316 3064 ntTSL 5 BASIC6.36□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 74.9 ms