Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Gm30570-201ENSMUST00000213553 2651 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Lsm1Q8VC85 Kmt2c-201ENSMUST00000045291 14967 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Lsm1Q8VC85 Wdr76-201ENSMUST00000028676 2789 ntAPPRIS P2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Lsm1Q8VC85 Med23-202ENSMUST00000092646 5098 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Lsm1Q8VC85 Atp10b-201ENSMUST00000077659 6825 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Lsm1Q8VC85 Igkv6-14-201ENSMUST00000103394 347 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Lsm1Q8VC85 Tpmt-202ENSMUST00000110118 881 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Lsm1Q8VC85 Ppp1r1c-203ENSMUST00000111780 708 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Lsm1Q8VC85 Stk36-203ENSMUST00000113694 629 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Lsm1Q8VC85 Tpm3-rs2-201ENSMUST00000116350 323 ntBASIC6.28□□□□□ -1.4
Lsm1Q8VC85 Snord88a-201ENSMUST00000116723 90 ntBASIC6.28□□□□□ -1.4
Lsm1Q8VC85 Gm22710-201ENSMUST00000116892 125 ntBASIC6.28□□□□□ -1.4
Lsm1Q8VC85 Gm7821-201ENSMUST00000117111 788 ntBASIC6.28□□□□□ -1.4
Lsm1Q8VC85 Gm11976-201ENSMUST00000119236 295 ntBASIC6.28□□□□□ -1.4
Lsm1Q8VC85 Gm14728-201ENSMUST00000122196 492 ntBASIC6.28□□□□□ -1.4
Lsm1Q8VC85 Gm8089-201ENSMUST00000122463 968 ntBASIC6.28□□□□□ -1.4
Lsm1Q8VC85 Gm14503-201ENSMUST00000130337 1164 ntBASIC6.28□□□□□ -1.4
Lsm1Q8VC85 Gm15473-201ENSMUST00000140746 1179 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Lsm1Q8VC85 Gm6401-202ENSMUST00000164232 618 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
Lsm1Q8VC85 Serpina4-ps1-201ENSMUST00000166601 1287 ntBASIC6.28□□□□□ -1.4
Lsm1Q8VC85 Rsl24d1-204ENSMUST00000169399 841 ntTSL 3 BASIC6.28□□□□□ -1.4
Lsm1Q8VC85 Gm29483-201ENSMUST00000188188 1078 ntTSL 3 BASIC6.28□□□□□ -1.4
Lsm1Q8VC85 Gm19739-201ENSMUST00000195941 153 ntBASIC6.28□□□□□ -1.4
Lsm1Q8VC85 Gm8454-201ENSMUST00000196980 811 ntBASIC6.28□□□□□ -1.4
Lsm1Q8VC85 Fabp7-201ENSMUST00000020024 804 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Lsm1Q8VC85 Gm7463-201ENSMUST00000201541 547 ntBASIC6.28□□□□□ -1.4
Lsm1Q8VC85 AC163661.1-201ENSMUST00000216546 910 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Lsm1Q8VC85 AC155270.1-202ENSMUST00000221503 352 ntBASIC6.28□□□□□ -1.4
Lsm1Q8VC85 CT009495.1-201ENSMUST00000224221 862 ntBASIC6.28□□□□□ -1.4
Lsm1Q8VC85 CT030254.1-201ENSMUST00000225450 1078 ntBASIC6.28□□□□□ -1.4
Lsm1Q8VC85 Gm9788-201ENSMUST00000057038 906 ntBASIC6.28□□□□□ -1.4
Lsm1Q8VC85 Gm24621-201ENSMUST00000082679 140 ntBASIC6.28□□□□□ -1.4
Lsm1Q8VC85 Olfr1416-201ENSMUST00000086837 939 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Lsm1Q8VC85 Gm5446-201ENSMUST00000091762 784 ntBASIC6.28□□□□□ -1.4
Lsm1Q8VC85 AC174459.1-201ENSMUST00000224476 1943 ntBASIC6.28□□□□□ -1.4
Lsm1Q8VC85 9430053O09Rik-201ENSMUST00000192654 2570 ntBASIC6.28□□□□□ -1.4
Lsm1Q8VC85 Etl4-202ENSMUST00000066509 7197 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
Lsm1Q8VC85 4930568G15Rik-201ENSMUST00000193317 3218 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Lsm1Q8VC85 4921534H16Rik-202ENSMUST00000162911 2838 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Lsm1Q8VC85 Gm26538-201ENSMUST00000180512 3498 ntTSL 5 BASIC6.28□□□□□ -1.4
Lsm1Q8VC85 Phxr4-202ENSMUST00000216590 1391 ntBASIC6.28□□□□□ -1.4
Lsm1Q8VC85 Cfhr2-201ENSMUST00000094489 1609 ntAPPRIS P2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Lsm1Q8VC85 Olfr286-201ENSMUST00000073612 3821 ntAPPRIS P1 TSL 3 BASIC6.28□□□□□ -1.4
Lsm1Q8VC85 Pus10-203ENSMUST00000109525 3177 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Lsm1Q8VC85 AW554918-208ENSMUST00000165400 5351 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
Lsm1Q8VC85 AW554918-202ENSMUST00000097643 5351 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
Lsm1Q8VC85 Ptprd-220ENSMUST00000174831 4518 ntTSL 5 BASIC6.27□□□□□ -1.4
Lsm1Q8VC85 Bivm-201ENSMUST00000035991 3313 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Lsm1Q8VC85 Car5b-201ENSMUST00000033739 3436 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Lsm1Q8VC85 Olfr745-202ENSMUST00000213127 1930 ntTSL 5 BASIC6.27□□□□□ -1.41
Lsm1Q8VC85 Vmn1r71-203ENSMUST00000227003 5048 ntAPPRIS P2 BASIC6.27□□□□□ -1.41
Lsm1Q8VC85 Gm18878-201ENSMUST00000223071 1443 ntBASIC6.27□□□□□ -1.41
Lsm1Q8VC85 Gm15475-201ENSMUST00000137673 3757 ntTSL 2 BASIC6.27□□□□□ -1.41
Lsm1Q8VC85 Chd6-201ENSMUST00000039782 10515 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Lsm1Q8VC85 Pard3-212ENSMUST00000160717 4214 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Lsm1Q8VC85 Inpp5f-208ENSMUST00000151237 2609 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Lsm1Q8VC85 Gm9226-201ENSMUST00000188352 3489 ntBASIC6.27□□□□□ -1.41
Lsm1Q8VC85 Osbpl9-216ENSMUST00000161363 2356 ntTSL 5 BASIC6.27□□□□□ -1.41
Lsm1Q8VC85 Zfp973-201ENSMUST00000108985 1295 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Lsm1Q8VC85 Gm11462-201ENSMUST00000117749 562 ntBASIC6.27□□□□□ -1.41
Lsm1Q8VC85 Gm11858-201ENSMUST00000117935 838 ntBASIC6.27□□□□□ -1.41
Lsm1Q8VC85 Gm14295-201ENSMUST00000118012 1213 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Lsm1Q8VC85 Gm14584-201ENSMUST00000118956 637 ntBASIC6.27□□□□□ -1.41
Lsm1Q8VC85 n-R5s48-201ENSMUST00000122482 110 ntBASIC6.27□□□□□ -1.41
Lsm1Q8VC85 Halr1-201ENSMUST00000125374 391 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Lsm1Q8VC85 1700054M17Rik-201ENSMUST00000125654 445 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Lsm1Q8VC85 Gm11423-202ENSMUST00000152784 686 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Lsm1Q8VC85 E130111B04Rik-201ENSMUST00000156781 450 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Lsm1Q8VC85 Gm22094-201ENSMUST00000158976 117 ntBASIC6.27□□□□□ -1.41
Lsm1Q8VC85 Airn-202ENSMUST00000159731 435 ntTSL 3 BASIC6.27□□□□□ -1.41
Lsm1Q8VC85 Igkv4-53-201ENSMUST00000166380 292 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Lsm1Q8VC85 Gm17140-201ENSMUST00000169163 627 ntTSL 3 BASIC6.27□□□□□ -1.41
Lsm1Q8VC85 Gm26959-201ENSMUST00000182376 978 ntBASIC6.27□□□□□ -1.41
Lsm1Q8VC85 Gtpbp4-ps3-201ENSMUST00000184093 136 ntBASIC6.27□□□□□ -1.41
Lsm1Q8VC85 Gm28195-201ENSMUST00000186992 372 ntBASIC6.27□□□□□ -1.41
Lsm1Q8VC85 C730036E19Rik-201ENSMUST00000188305 1102 ntTSL 5 BASIC6.27□□□□□ -1.41
Lsm1Q8VC85 Gm37679-201ENSMUST00000192868 1192 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Lsm1Q8VC85 Gm37294-201ENSMUST00000193461 494 ntTSL 3 BASIC6.27□□□□□ -1.41
Lsm1Q8VC85 Gm36965-201ENSMUST00000193797 394 ntBASIC6.27□□□□□ -1.41
Lsm1Q8VC85 Gm43664-201ENSMUST00000196038 734 ntBASIC6.27□□□□□ -1.41
Lsm1Q8VC85 Gm43098-201ENSMUST00000199989 1297 ntBASIC6.27□□□□□ -1.41
Lsm1Q8VC85 Gm42799-201ENSMUST00000201331 328 ntBASIC6.27□□□□□ -1.41
Lsm1Q8VC85 Gm44386-201ENSMUST00000204288 429 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Lsm1Q8VC85 Gm7972-201ENSMUST00000208434 1137 ntBASIC6.27□□□□□ -1.41
Lsm1Q8VC85 Gm45703-201ENSMUST00000212293 891 ntTSL 5 BASIC6.27□□□□□ -1.41
Lsm1Q8VC85 Gm31036-201ENSMUST00000212925 521 ntTSL 3 BASIC6.27□□□□□ -1.41
Lsm1Q8VC85 AC124184.1-201ENSMUST00000218167 283 ntBASIC6.27□□□□□ -1.41
Lsm1Q8VC85 AC155709.1-201ENSMUST00000218794 162 ntBASIC6.27□□□□□ -1.41
Lsm1Q8VC85 Arhgdib-201ENSMUST00000032344 1193 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Lsm1Q8VC85 Olfr961-201ENSMUST00000076548 949 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Lsm1Q8VC85 Lats2-203ENSMUST00000077981 786 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Lsm1Q8VC85 Adipor2-201ENSMUST00000032272 4184 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Lsm1Q8VC85 Gm43031-201ENSMUST00000198500 1887 ntBASIC6.27□□□□□ -1.41
Lsm1Q8VC85 Olfr619-202ENSMUST00000215732 1370 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Lsm1Q8VC85 Awat1-201ENSMUST00000096361 1390 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Lsm1Q8VC85 Tgif1-211ENSMUST00000186358 1455 ntTSL 3 BASIC6.27□□□□□ -1.41
Lsm1Q8VC85 Ttc33-201ENSMUST00000022751 1832 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Lsm1Q8VC85 Vmn1r6-204ENSMUST00000227188 8185 ntAPPRIS ALT2 BASIC6.27□□□□□ -1.41
Lsm1Q8VC85 Vmn2r-ps54-202ENSMUST00000150147 2952 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Lsm1Q8VC85 Gm44889-203ENSMUST00000208346 1589 ntTSL 5 BASIC6.27□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms