Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Gm44546-201ENSMUST00000208353 368 ntTSL 2 BASIC8.4□□□□□ -1.06
Trim47Q8C0E3 Gm45446-201ENSMUST00000209348 216 ntBASIC8.4□□□□□ -1.06
Trim47Q8C0E3 Gm15839-202ENSMUST00000211219 664 ntTSL 3 BASIC8.4□□□□□ -1.06
Trim47Q8C0E3 AC192091.1-201ENSMUST00000218668 439 ntBASIC8.4□□□□□ -1.06
Trim47Q8C0E3 Gm32515-201ENSMUST00000219396 350 ntTSL 2 BASIC8.4□□□□□ -1.06
Trim47Q8C0E3 Rpl29-ps2-202ENSMUST00000220540 1165 ntTSL 5 BASIC8.4□□□□□ -1.06
Trim47Q8C0E3 AC124450.1-201ENSMUST00000225569 495 ntBASIC8.4□□□□□ -1.06
Trim47Q8C0E3 AC154727.1-201ENSMUST00000226537 499 ntBASIC8.4□□□□□ -1.06
Trim47Q8C0E3 CT030662.2-201ENSMUST00000226942 805 ntBASIC8.4□□□□□ -1.06
Trim47Q8C0E3 CT025548.1-201ENSMUST00000227459 257 ntBASIC8.4□□□□□ -1.06
Trim47Q8C0E3 Sprr2j-ps-201ENSMUST00000029533 678 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Trim47Q8C0E3 5530400C23Rik-201ENSMUST00000048459 649 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Trim47Q8C0E3 Olfr781-201ENSMUST00000075613 936 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
Trim47Q8C0E3 Olfr1148-201ENSMUST00000077580 945 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
Trim47Q8C0E3 Olfr1131-201ENSMUST00000090712 930 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
Trim47Q8C0E3 A730085K08Rik-201ENSMUST00000177015 2013 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Trim47Q8C0E3 Prickle2-204ENSMUST00000113447 7679 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Trim47Q8C0E3 Slirp-204ENSMUST00000161023 2701 ntAPPRIS P2 TSL 1 (best) BASIC8.4□□□□□ -1.06
Trim47Q8C0E3 AC132465.2-201ENSMUST00000218673 2728 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Trim47Q8C0E3 Pogz-203ENSMUST00000107266 4100 ntAPPRIS ALT2 TSL 5 BASIC8.4□□□□□ -1.07
Trim47Q8C0E3 Gm42514-201ENSMUST00000196636 1832 ntBASIC8.4□□□□□ -1.07
Trim47Q8C0E3 Trim16-201ENSMUST00000055006 3906 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
Trim47Q8C0E3 Eml1-201ENSMUST00000054955 3879 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
Trim47Q8C0E3 Parp8-201ENSMUST00000022239 3098 ntTSL 5 BASIC8.4□□□□□ -1.07
Trim47Q8C0E3 2900027M19Rik-201ENSMUST00000207411 4448 ntBASIC8.4□□□□□ -1.07
Trim47Q8C0E3 CT010505.3-201ENSMUST00000227835 1651 ntBASIC8.4□□□□□ -1.07
Trim47Q8C0E3 Atxn7l1-201ENSMUST00000077456 1624 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
Trim47Q8C0E3 Svil-210ENSMUST00000140448 7423 ntAPPRIS P3 TSL 5 BASIC8.4□□□□□ -1.07
Trim47Q8C0E3 Pld1-202ENSMUST00000120834 4849 ntAPPRIS P2 TSL 1 (best) BASIC8.4□□□□□ -1.07
Trim47Q8C0E3 Gm26720-201ENSMUST00000181260 3538 ntTSL 5 BASIC8.4□□□□□ -1.07
Trim47Q8C0E3 Gm18491-201ENSMUST00000192492 1594 ntBASIC8.39□□□□□ -1.07
Trim47Q8C0E3 Mccc1os-201ENSMUST00000124469 3353 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Trim47Q8C0E3 Gm44116-201ENSMUST00000204269 1525 ntBASIC8.39□□□□□ -1.07
Trim47Q8C0E3 Gm36011-201ENSMUST00000208671 2719 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Trim47Q8C0E3 Zfp239-201ENSMUST00000079405 3158 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Trim47Q8C0E3 Lyg2-201ENSMUST00000078307 2564 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Trim47Q8C0E3 Psg20-201ENSMUST00000076677 1428 ntAPPRIS ALT2 TSL 5 BASIC8.39□□□□□ -1.07
Trim47Q8C0E3 Zfp652-202ENSMUST00000107717 10433 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
Trim47Q8C0E3 Csmd2-205ENSMUST00000184063 13555 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
Trim47Q8C0E3 Olfr25-202ENSMUST00000212354 1362 ntAPPRIS ALT2 BASIC8.39□□□□□ -1.07
Trim47Q8C0E3 Zhx3-201ENSMUST00000103111 9563 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Trim47Q8C0E3 Gm21056-201ENSMUST00000221636 4635 ntTSL 5 BASIC8.39□□□□□ -1.07
Trim47Q8C0E3 Mtif2-201ENSMUST00000020749 2425 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Trim47Q8C0E3 Ptprr-202ENSMUST00000105271 2856 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Trim47Q8C0E3 Mybbp1a-201ENSMUST00000045633 4358 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Trim47Q8C0E3 Gm15778-201ENSMUST00000118469 608 ntBASIC8.39□□□□□ -1.07
Trim47Q8C0E3 Gm11895-201ENSMUST00000122165 467 ntBASIC8.39□□□□□ -1.07
Trim47Q8C0E3 Mup9-204ENSMUST00000122381 864 ntAPPRIS P2 TSL 2 BASIC8.39□□□□□ -1.07
Trim47Q8C0E3 St8sia3os-201ENSMUST00000123473 652 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Trim47Q8C0E3 Olfr636-ps1-201ENSMUST00000134827 935 ntBASIC8.39□□□□□ -1.07
Trim47Q8C0E3 Gm16362-201ENSMUST00000135189 214 ntBASIC8.39□□□□□ -1.07
Trim47Q8C0E3 Gm12868-201ENSMUST00000143801 417 ntTSL 3 BASIC8.39□□□□□ -1.07
Trim47Q8C0E3 Gm14009-201ENSMUST00000152439 656 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Trim47Q8C0E3 Gm7152-201ENSMUST00000163570 605 ntBASIC8.39□□□□□ -1.07
Trim47Q8C0E3 Gm7502-201ENSMUST00000169235 733 ntBASIC8.39□□□□□ -1.07
Trim47Q8C0E3 Gm9286-201ENSMUST00000173586 508 ntBASIC8.39□□□□□ -1.07
Trim47Q8C0E3 Gm25120-201ENSMUST00000180148 79 ntBASIC8.39□□□□□ -1.07
Trim47Q8C0E3 Cbx3-ps6-201ENSMUST00000181108 552 ntBASIC8.39□□□□□ -1.07
Trim47Q8C0E3 Gm8609-201ENSMUST00000182967 998 ntBASIC8.39□□□□□ -1.07
Trim47Q8C0E3 Mir6409-201ENSMUST00000184957 92 ntBASIC8.39□□□□□ -1.07
Trim47Q8C0E3 Gm21095-202ENSMUST00000185776 923 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Trim47Q8C0E3 Gm28142-201ENSMUST00000186899 698 ntBASIC8.39□□□□□ -1.07
Trim47Q8C0E3 Gm28114-201ENSMUST00000187232 379 ntBASIC8.39□□□□□ -1.07
Trim47Q8C0E3 Gm28512-201ENSMUST00000187415 762 ntTSL 3 BASIC8.39□□□□□ -1.07
Trim47Q8C0E3 Gm28700-201ENSMUST00000187614 579 ntBASIC8.39□□□□□ -1.07
Trim47Q8C0E3 Gm28145-201ENSMUST00000189742 380 ntBASIC8.39□□□□□ -1.07
Trim47Q8C0E3 Gm4785-201ENSMUST00000191025 751 ntBASIC8.39□□□□□ -1.07
Trim47Q8C0E3 Oaz3-201ENSMUST00000191506 732 ntAPPRIS P2 TSL 5 BASIC8.39□□□□□ -1.07
Trim47Q8C0E3 Gm37892-201ENSMUST00000192018 437 ntTSL 3 BASIC8.39□□□□□ -1.07
Trim47Q8C0E3 Gm44356-201ENSMUST00000196731 111 ntBASIC8.39□□□□□ -1.07
Trim47Q8C0E3 Gm1969-201ENSMUST00000198125 1220 ntBASIC8.39□□□□□ -1.07
Trim47Q8C0E3 A230098N10Rik-202ENSMUST00000200055 356 ntTSL 2 BASIC8.39□□□□□ -1.07
Trim47Q8C0E3 Gm44287-201ENSMUST00000203069 290 ntTSL 3 BASIC8.39□□□□□ -1.07
Trim47Q8C0E3 Gm36328-201ENSMUST00000204237 432 ntTSL 3 BASIC8.39□□□□□ -1.07
Trim47Q8C0E3 Gm34225-203ENSMUST00000206921 572 ntTSL 5 BASIC8.39□□□□□ -1.07
Trim47Q8C0E3 Gm21320-201ENSMUST00000211875 861 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Trim47Q8C0E3 AC159472.1-201ENSMUST00000218178 463 ntBASIC8.39□□□□□ -1.07
Trim47Q8C0E3 Gm9118-201ENSMUST00000219246 754 ntBASIC8.39□□□□□ -1.07
Trim47Q8C0E3 Atp8b3-202ENSMUST00000219648 524 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Trim47Q8C0E3 Gm18503-201ENSMUST00000220340 728 ntBASIC8.39□□□□□ -1.07
Trim47Q8C0E3 Vmn1r86-202ENSMUST00000226604 6378 ntAPPRIS P2 BASIC8.39□□□□□ -1.07
Trim47Q8C0E3 Olfr49-201ENSMUST00000059996 1030 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
Trim47Q8C0E3 Cbx3-ps7-201ENSMUST00000081455 552 ntBASIC8.39□□□□□ -1.07
Trim47Q8C0E3 Wfdc10-201ENSMUST00000094344 459 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Trim47Q8C0E3 Atp5l-ps1-201ENSMUST00000097132 312 ntBASIC8.39□□□□□ -1.07
Trim47Q8C0E3 Tctex1d1-202ENSMUST00000116317 1772 ntAPPRIS P3 TSL 5 BASIC8.39□□□□□ -1.07
Trim47Q8C0E3 Vmn1r37-205ENSMUST00000227923 1773 ntAPPRIS P2 BASIC8.39□□□□□ -1.07
Trim47Q8C0E3 Slc17a3-202ENSMUST00000091698 1759 ntTSL 5 BASIC8.39□□□□□ -1.07
Trim47Q8C0E3 AC132596.1-201ENSMUST00000223043 2263 ntTSL 5 BASIC8.39□□□□□ -1.07
Trim47Q8C0E3 Trdmt1-202ENSMUST00000124488 3788 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Trim47Q8C0E3 Vmn1r70-204ENSMUST00000228090 3185 ntAPPRIS ALT2 BASIC8.39□□□□□ -1.07
Trim47Q8C0E3 Zfp128-202ENSMUST00000144578 3834 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Trim47Q8C0E3 Olfr859-203ENSMUST00000217280 9596 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
Trim47Q8C0E3 Ccdc169-201ENSMUST00000052904 2889 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Trim47Q8C0E3 4933406J09Rik-201ENSMUST00000203352 1505 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Trim47Q8C0E3 Gm43679-201ENSMUST00000197051 3677 ntBASIC8.39□□□□□ -1.07
Trim47Q8C0E3 Dlg2-203ENSMUST00000107193 4910 ntAPPRIS ALT2 TSL 5 BASIC8.39□□□□□ -1.07
Trim47Q8C0E3 Hrh2-201ENSMUST00000038101 2789 ntAPPRIS P2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Trim47Q8C0E3 Tbc1d24-206ENSMUST00000168410 7683 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Trim47Q8C0E3 Gm9256-201ENSMUST00000198106 1420 ntBASIC8.38□□□□□ -1.07
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms