Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Fundc2-201ENSMUST00000033541 2562 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Usp47Q8BY87 Bbs12-201ENSMUST00000057975 2433 ntAPPRIS P1 TSL 2 BASIC9.13□□□□□ -0.95
Usp47Q8BY87 Gm10032-201ENSMUST00000071522 1887 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Usp47Q8BY87 Abcc1-201ENSMUST00000100167 6792 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Usp47Q8BY87 Poln-201ENSMUST00000042954 2897 ntAPPRIS P3 TSL 1 (best) BASIC9.13□□□□□ -0.95
Usp47Q8BY87 St18-201ENSMUST00000043578 5862 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Usp47Q8BY87 Carf-209ENSMUST00000187978 5463 ntAPPRIS P3 TSL 1 (best) BASIC9.13□□□□□ -0.95
Usp47Q8BY87 Xrn1-201ENSMUST00000034981 5499 ntAPPRIS P3 TSL 1 (best) BASIC9.13□□□□□ -0.95
Usp47Q8BY87 C630043F03Rik-201ENSMUST00000122923 2581 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Usp47Q8BY87 Nlrp1c-ps-202ENSMUST00000174668 3422 ntBASIC9.13□□□□□ -0.95
Usp47Q8BY87 Gm16568-201ENSMUST00000066038 1910 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Usp47Q8BY87 Gm37289-201ENSMUST00000195409 1402 ntBASIC9.13□□□□□ -0.95
Usp47Q8BY87 Olfr10-202ENSMUST00000217290 2776 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
Usp47Q8BY87 Igkv15-103-201ENSMUST00000103324 375 ntAPPRIS P1 BASIC9.12□□□□□ -0.95
Usp47Q8BY87 Gm14391-202ENSMUST00000109055 965 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Usp47Q8BY87 Gm12874-201ENSMUST00000117190 913 ntBASIC9.12□□□□□ -0.95
Usp47Q8BY87 Gm12244-201ENSMUST00000119500 291 ntBASIC9.12□□□□□ -0.95
Usp47Q8BY87 Gm4789-201ENSMUST00000121708 1216 ntBASIC9.12□□□□□ -0.95
Usp47Q8BY87 Gm22276-201ENSMUST00000122469 129 ntBASIC9.12□□□□□ -0.95
Usp47Q8BY87 4933406K04Rik-202ENSMUST00000124363 1064 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Usp47Q8BY87 Gm14419-203ENSMUST00000156844 752 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Usp47Q8BY87 Gm25117-201ENSMUST00000157194 144 ntBASIC9.12□□□□□ -0.95
Usp47Q8BY87 Olfr92-201ENSMUST00000168659 939 ntAPPRIS P1 BASIC9.12□□□□□ -0.95
Usp47Q8BY87 Gm5885-201ENSMUST00000178578 648 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Usp47Q8BY87 Gm17824-201ENSMUST00000197690 805 ntBASIC9.12□□□□□ -0.95
Usp47Q8BY87 Gm4962-201ENSMUST00000199640 2977 ntBASIC9.12□□□□□ -0.95
Usp47Q8BY87 Gm43116-201ENSMUST00000199789 195 ntBASIC9.12□□□□□ -0.95
Usp47Q8BY87 Ppp1r36-204ENSMUST00000220187 504 ntTSL 3 BASIC9.12□□□□□ -0.95
Usp47Q8BY87 AC105950.1-201ENSMUST00000222637 408 ntBASIC9.12□□□□□ -0.95
Usp47Q8BY87 AC122251.2-201ENSMUST00000227341 603 ntBASIC9.12□□□□□ -0.95
Usp47Q8BY87 Trps1-201ENSMUST00000077935 4436 ntAPPRIS P3 TSL 1 (best) BASIC9.12□□□□□ -0.95
Usp47Q8BY87 Mphosph9-201ENSMUST00000031344 7747 ntAPPRIS P3 TSL 5 BASIC9.12□□□□□ -0.95
Usp47Q8BY87 Add3-201ENSMUST00000025999 4334 ntAPPRIS P3 TSL 1 (best) BASIC9.12□□□□□ -0.95
Usp47Q8BY87 Mkl2-204ENSMUST00000149359 8295 ntAPPRIS P3 TSL 1 (best) BASIC9.12□□□□□ -0.95
Usp47Q8BY87 4933405O20Rik-201ENSMUST00000119710 1341 ntAPPRIS P1 BASIC9.12□□□□□ -0.95
Usp47Q8BY87 Pou1f1-204ENSMUST00000176330 1310 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Usp47Q8BY87 Olfr1380-202ENSMUST00000215360 2498 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
Usp47Q8BY87 Tmod2-206ENSMUST00000215036 1797 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Usp47Q8BY87 Lmo3-204ENSMUST00000162772 3664 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Usp47Q8BY87 Fmr1-203ENSMUST00000114654 4061 ntAPPRIS ALT1 TSL 5 BASIC9.12□□□□□ -0.95
Usp47Q8BY87 Olfr802-202ENSMUST00000203785 5535 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
Usp47Q8BY87 Olfr50-201ENSMUST00000112950 1157 ntAPPRIS P1 BASIC9.12□□□□□ -0.95
Usp47Q8BY87 Gm13373-201ENSMUST00000144634 655 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Usp47Q8BY87 Gm15401-203ENSMUST00000156497 378 ntTSL 3 BASIC9.12□□□□□ -0.95
Usp47Q8BY87 1700129C05Rik-202ENSMUST00000159858 784 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
Usp47Q8BY87 Gm22701-201ENSMUST00000175371 291 ntBASIC9.12□□□□□ -0.95
Usp47Q8BY87 Rps16-ps3-201ENSMUST00000179126 441 ntBASIC9.12□□□□□ -0.95
Usp47Q8BY87 Gm17847-201ENSMUST00000188261 1127 ntBASIC9.12□□□□□ -0.95
Usp47Q8BY87 1700110C19Rik-202ENSMUST00000188715 717 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Usp47Q8BY87 7530428D23Rik-201ENSMUST00000191725 765 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Usp47Q8BY87 Gm37784-201ENSMUST00000193233 189 ntBASIC9.12□□□□□ -0.95
Usp47Q8BY87 4930597L12Rik-201ENSMUST00000196286 911 ntBASIC9.12□□□□□ -0.95
Usp47Q8BY87 Gm41231-201ENSMUST00000211525 449 ntTSL 5 BASIC9.12□□□□□ -0.95
Usp47Q8BY87 AC140930.1-201ENSMUST00000221889 389 ntBASIC9.12□□□□□ -0.95
Usp47Q8BY87 AC139568.1-201ENSMUST00000222878 486 ntBASIC9.12□□□□□ -0.95
Usp47Q8BY87 AC131187.2-201ENSMUST00000223936 994 ntBASIC9.12□□□□□ -0.95
Usp47Q8BY87 Sprr2j-ps-201ENSMUST00000029533 678 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Usp47Q8BY87 Cep120-201ENSMUST00000049811 4553 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Usp47Q8BY87 Plb1-201ENSMUST00000101376 4699 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
Usp47Q8BY87 Gm34777-201ENSMUST00000219688 2505 ntTSL 5 BASIC9.11□□□□□ -0.95
Usp47Q8BY87 Ppp2r5c-202ENSMUST00000109832 4108 ntTSL 2 BASIC9.11□□□□□ -0.95
Usp47Q8BY87 Agl-203ENSMUST00000159742 4344 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Usp47Q8BY87 Zmym5-202ENSMUST00000111285 5351 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
Usp47Q8BY87 Gm38120-201ENSMUST00000195506 4642 ntBASIC9.11□□□□□ -0.95
Usp47Q8BY87 Zfp729a-201ENSMUST00000012314 9455 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Usp47Q8BY87 Ptch1-202ENSMUST00000192155 7002 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
Usp47Q8BY87 Zfp935-204ENSMUST00000223247 1949 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Usp47Q8BY87 Olfr691-202ENSMUST00000213290 2327 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
Usp47Q8BY87 Gabrb3-202ENSMUST00000085240 5712 ntTSL 5 BASIC9.11□□□□□ -0.95
Usp47Q8BY87 Kif15-201ENSMUST00000040717 4858 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Usp47Q8BY87 Scgb2b23-ps-201ENSMUST00000122094 330 ntBASIC9.11□□□□□ -0.95
Usp47Q8BY87 Anapc13-202ENSMUST00000186693 595 ntAPPRIS P1 TSL 2 BASIC9.11□□□□□ -0.95
Usp47Q8BY87 Gm37901-201ENSMUST00000195107 514 ntBASIC9.11□□□□□ -0.95
Usp47Q8BY87 Gm6290-201ENSMUST00000207666 1158 ntBASIC9.11□□□□□ -0.95
Usp47Q8BY87 Olfr374-201ENSMUST00000209675 1053 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
Usp47Q8BY87 AC165260.1-201ENSMUST00000224127 683 ntBASIC9.11□□□□□ -0.95
Usp47Q8BY87 Gm6820-201ENSMUST00000188803 2173 ntBASIC9.1□□□□□ -0.95
Usp47Q8BY87 Tmem68-201ENSMUST00000029891 2690 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Usp47Q8BY87 AC141476.1-201ENSMUST00000224988 3387 ntBASIC9.1□□□□□ -0.95
Usp47Q8BY87 Gm26530-201ENSMUST00000180969 3941 ntTSL 5 BASIC9.1□□□□□ -0.95
Usp47Q8BY87 Dleu2-207ENSMUST00000182756 3530 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Usp47Q8BY87 Vmn1r44-210ENSMUST00000227747 1811 ntBASIC9.1□□□□□ -0.95
Usp47Q8BY87 Calcrl-201ENSMUST00000074262 4882 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Usp47Q8BY87 Olfr119-201ENSMUST00000080483 1541 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Usp47Q8BY87 Gm7980-201ENSMUST00000168107 1403 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
Usp47Q8BY87 AC115760.1-201ENSMUST00000225160 1327 ntBASIC9.1□□□□□ -0.95
Usp47Q8BY87 Mef2c-227ENSMUST00000199432 3498 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Usp47Q8BY87 AC122346.1-201ENSMUST00000225266 3732 ntBASIC9.1□□□□□ -0.95
Usp47Q8BY87 Ampd3-201ENSMUST00000005829 4094 ntAPPRIS P2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Usp47Q8BY87 Gm15475-201ENSMUST00000137673 3757 ntTSL 2 BASIC9.1□□□□□ -0.95
Usp47Q8BY87 Olfr716-204ENSMUST00000213367 3585 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
Usp47Q8BY87 Xpo1-203ENSMUST00000102870 3471 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
Usp47Q8BY87 Olfr1275-202ENSMUST00000216421 2418 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
Usp47Q8BY87 Gm17491-201ENSMUST00000180411 2311 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Usp47Q8BY87 Trbv13-2-201ENSMUST00000103270 340 ntAPPRIS P1 BASIC9.1□□□□□ -0.95
Usp47Q8BY87 Gm15366-201ENSMUST00000118433 1019 ntBASIC9.1□□□□□ -0.95
Usp47Q8BY87 Gm12262-201ENSMUST00000119915 305 ntBASIC9.1□□□□□ -0.95
Usp47Q8BY87 Nlk-ps1-201ENSMUST00000120843 1230 ntBASIC9.1□□□□□ -0.95
Usp47Q8BY87 Gm12890-201ENSMUST00000120885 373 ntBASIC9.1□□□□□ -0.95
Usp47Q8BY87 Tbata-208ENSMUST00000143207 982 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 112.9 ms