Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Gm20751-201ENSMUST00000210260 1270 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
ClpbQ60649 Gm45279-201ENSMUST00000210315 391 ntBASIC6.41□□□□□ -1.38
ClpbQ60649 Gm45335-201ENSMUST00000210618 401 ntTSL 5 BASIC6.41□□□□□ -1.38
ClpbQ60649 Gm30676-202ENSMUST00000214464 793 ntTSL 5 BASIC6.41□□□□□ -1.38
ClpbQ60649 Gm7588-201ENSMUST00000216866 571 ntBASIC6.41□□□□□ -1.38
ClpbQ60649 AC132121.1-201ENSMUST00000220774 332 ntBASIC6.41□□□□□ -1.38
ClpbQ60649 AC154323.2-201ENSMUST00000226557 1151 ntBASIC6.41□□□□□ -1.38
ClpbQ60649 Vmn1r35-201ENSMUST00000071414 891 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
ClpbQ60649 n-R5s95-201ENSMUST00000082684 118 ntBASIC6.41□□□□□ -1.38
ClpbQ60649 Gm22005-201ENSMUST00000082795 141 ntBASIC6.41□□□□□ -1.38
ClpbQ60649 Gm24036-201ENSMUST00000082868 156 ntBASIC6.41□□□□□ -1.38
ClpbQ60649 Mir196a-1-201ENSMUST00000083612 102 ntBASIC6.41□□□□□ -1.38
ClpbQ60649 Olfr1085-201ENSMUST00000099879 942 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
ClpbQ60649 Cox11-202ENSMUST00000099960 773 ntAPPRIS ALT2 TSL 2 BASIC6.41□□□□□ -1.38
ClpbQ60649 Gm45297-201ENSMUST00000209893 3483 ntBASIC6.41□□□□□ -1.38
ClpbQ60649 Usp14-202ENSMUST00000116669 2019 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
ClpbQ60649 Gm38276-201ENSMUST00000192446 1343 ntBASIC6.41□□□□□ -1.38
ClpbQ60649 Lrriq3-203ENSMUST00000194376 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
ClpbQ60649 Gm31049-201ENSMUST00000201516 1302 ntBASIC6.41□□□□□ -1.38
ClpbQ60649 Gm10555-201ENSMUST00000193178 1791 ntBASIC6.41□□□□□ -1.38
ClpbQ60649 Gm46348-201ENSMUST00000222917 2151 ntTSL 5 BASIC6.41□□□□□ -1.38
ClpbQ60649 Fam196b-201ENSMUST00000093192 5031 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
ClpbQ60649 Olfr701-202ENSMUST00000166880 1444 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
ClpbQ60649 Scn8a-205ENSMUST00000108910 11232 ntAPPRIS ALT1 TSL 1 (best) BASIC6.41□□□□□ -1.38
ClpbQ60649 A830008E24Rik-202ENSMUST00000190485 5226 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
ClpbQ60649 Dsg1b-201ENSMUST00000076737 3965 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
ClpbQ60649 Gm5454-201ENSMUST00000052030 1453 ntBASIC6.41□□□□□ -1.38
ClpbQ60649 Gm42940-201ENSMUST00000200361 2362 ntBASIC6.4□□□□□ -1.38
ClpbQ60649 Gm29461-201ENSMUST00000189232 4176 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
ClpbQ60649 Oprk1-203ENSMUST00000160339 2481 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
ClpbQ60649 Gm6614-203ENSMUST00000181791 2450 ntAPPRIS P2 TSL 5 BASIC6.4□□□□□ -1.38
ClpbQ60649 Olfr1426-202ENSMUST00000208703 2546 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.38
ClpbQ60649 Olfr1278-203ENSMUST00000213727 6744 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
ClpbQ60649 4933421A08Rik-201ENSMUST00000135313 1638 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
ClpbQ60649 Mbnl3-204ENSMUST00000136404 1632 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.38
ClpbQ60649 Shroom4-201ENSMUST00000089520 8201 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
ClpbQ60649 Olfr432-203ENSMUST00000213381 4533 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
ClpbQ60649 Papola-215ENSMUST00000170002 2605 ntTSL 5 BASIC6.4□□□□□ -1.38
ClpbQ60649 Pcsk1-201ENSMUST00000022075 5040 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
ClpbQ60649 Zfp184-201ENSMUST00000006903 2214 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
ClpbQ60649 Mfap3-201ENSMUST00000020830 4839 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
ClpbQ60649 Gm12939-201ENSMUST00000117303 165 ntBASIC6.4□□□□□ -1.38
ClpbQ60649 Gm4992-201ENSMUST00000120256 768 ntBASIC6.4□□□□□ -1.38
ClpbQ60649 Gm14353-201ENSMUST00000122200 869 ntBASIC6.4□□□□□ -1.38
ClpbQ60649 Gm15991-201ENSMUST00000127631 942 ntTSL 5 BASIC6.4□□□□□ -1.38
ClpbQ60649 Gm13179-202ENSMUST00000151994 978 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
ClpbQ60649 Gm10364-202ENSMUST00000153034 1001 ntBASIC6.4□□□□□ -1.38
ClpbQ60649 Gm24682-201ENSMUST00000158764 137 ntBASIC6.4□□□□□ -1.38
ClpbQ60649 Gm16006-201ENSMUST00000160938 566 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
ClpbQ60649 Mir3471-2-201ENSMUST00000174896 102 ntBASIC6.4□□□□□ -1.38
ClpbQ60649 Gm24155-201ENSMUST00000175259 110 ntBASIC6.4□□□□□ -1.38
ClpbQ60649 Cyp2c53-ps-201ENSMUST00000175649 897 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
ClpbQ60649 G530012D18Rik-201ENSMUST00000178024 420 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
ClpbQ60649 Gm21392-201ENSMUST00000182950 972 ntBASIC6.4□□□□□ -1.38
ClpbQ60649 Gm29470-201ENSMUST00000188007 696 ntBASIC6.4□□□□□ -1.38
ClpbQ60649 1700020G17Rik-203ENSMUST00000191286 723 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
ClpbQ60649 Gm20877-202ENSMUST00000191358 1222 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
ClpbQ60649 9430037O13Rik-201ENSMUST00000192556 1008 ntBASIC6.4□□□□□ -1.38
ClpbQ60649 2310046K23Rik-201ENSMUST00000193521 677 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
ClpbQ60649 Gm7019-201ENSMUST00000194122 369 ntBASIC6.4□□□□□ -1.38
ClpbQ60649 Gm4860-201ENSMUST00000200368 454 ntBASIC6.4□□□□□ -1.38
ClpbQ60649 Zfp799-202ENSMUST00000201499 651 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
ClpbQ60649 Olfr726-202ENSMUST00000206834 1256 ntAPPRIS P1 TSL 3 BASIC6.4□□□□□ -1.38
ClpbQ60649 Gm45241-201ENSMUST00000211237 634 ntTSL 5 BASIC6.4□□□□□ -1.38
ClpbQ60649 AC165349.1-201ENSMUST00000217896 424 ntBASIC6.4□□□□□ -1.38
ClpbQ60649 AC132954.2-201ENSMUST00000222400 403 ntBASIC6.4□□□□□ -1.38
ClpbQ60649 Mup14-202ENSMUST00000075206 925 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
ClpbQ60649 Mir135a-1-201ENSMUST00000083473 90 ntBASIC6.4□□□□□ -1.38
ClpbQ60649 Gtsf1l-201ENSMUST00000094653 822 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
ClpbQ60649 Plek-201ENSMUST00000020321 3896 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
ClpbQ60649 Rsrc2-201ENSMUST00000050827 2344 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
ClpbQ60649 Gm10845-202ENSMUST00000228217 3389 ntBASIC6.4□□□□□ -1.38
ClpbQ60649 AC159196.3-201ENSMUST00000224307 1841 ntBASIC6.4□□□□□ -1.38
ClpbQ60649 Gm38368-201ENSMUST00000193181 1335 ntBASIC6.4□□□□□ -1.39
ClpbQ60649 Foxp1-204ENSMUST00000113322 7177 ntTSL 5 BASIC6.4□□□□□ -1.39
ClpbQ60649 4930402F06Rik-202ENSMUST00000113010 1372 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.39
ClpbQ60649 4933400F21Rik-203ENSMUST00000187295 2633 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
ClpbQ60649 Magi2-207ENSMUST00000197553 3264 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
ClpbQ60649 Ptprd-219ENSMUST00000174531 4509 ntTSL 5 BASIC6.4□□□□□ -1.39
ClpbQ60649 Gm37685-201ENSMUST00000193507 2177 ntBASIC6.4□□□□□ -1.39
ClpbQ60649 Gm37730-201ENSMUST00000192432 2211 ntBASIC6.4□□□□□ -1.39
ClpbQ60649 Olfr1390-202ENSMUST00000215014 2875 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
ClpbQ60649 Fam47c-201ENSMUST00000105110 1639 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
ClpbQ60649 Pcdh15-203ENSMUST00000105424 6932 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
ClpbQ60649 Pcdh15-202ENSMUST00000092420 6917 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
ClpbQ60649 AC103672.2-201ENSMUST00000228146 1687 ntBASIC6.39□□□□□ -1.39
ClpbQ60649 Klhl13-203ENSMUST00000115316 3064 ntTSL 5 BASIC6.39□□□□□ -1.39
ClpbQ60649 Ptbp2-207ENSMUST00000197464 1742 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
ClpbQ60649 Lum-201ENSMUST00000038160 2448 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
ClpbQ60649 Olfr458-202ENSMUST00000216650 1799 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
ClpbQ60649 Spata1-206ENSMUST00000197980 1807 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
ClpbQ60649 Vmn1r218-202ENSMUST00000226692 10430 ntAPPRIS P2 BASIC6.39□□□□□ -1.39
ClpbQ60649 Vmn2r4-202ENSMUST00000175724 2742 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
ClpbQ60649 Vmn2r6-202ENSMUST00000176481 2742 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
ClpbQ60649 Tnr-202ENSMUST00000192069 12202 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
ClpbQ60649 Fam196b-202ENSMUST00000165963 5371 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
ClpbQ60649 Kpna2-201ENSMUST00000018506 2054 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
ClpbQ60649 Olfr1338-202ENSMUST00000214922 2947 ntAPPRIS ALT1 TSL 5 BASIC6.39□□□□□ -1.39
ClpbQ60649 2610524H06Rik-201ENSMUST00000100850 947 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
ClpbQ60649 Gm12401-201ENSMUST00000118435 228 ntBASIC6.39□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 86.6 ms