Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 Kcnj16-206ENSMUST00000180023 3701 ntAPPRIS P1 TSL 3 BASIC5.99□□□□□ -1.45
Cdh11P55288 Triqk-203ENSMUST00000183345 3545 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
Cdh11P55288 Itch-201ENSMUST00000029126 5159 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Cdh11P55288 Cep70-201ENSMUST00000093795 2606 ntAPPRIS P2 TSL 1 (best) BASIC5.99□□□□□ -1.45
Cdh11P55288 Rfx3-201ENSMUST00000046898 4274 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Cdh11P55288 Cnep1r1-203ENSMUST00000121097 2209 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Cdh11P55288 Gramd1c-204ENSMUST00000214098 2046 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
Cdh11P55288 A2m-201ENSMUST00000032203 4605 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Cdh11P55288 Ftx-205ENSMUST00000156211 4215 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Cdh11P55288 Prr14l-201ENSMUST00000120129 9959 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
Cdh11P55288 Map2-201ENSMUST00000024639 5195 ntTSL 5 BASIC5.99□□□□□ -1.45
Cdh11P55288 Dock7-205ENSMUST00000127417 6796 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
Cdh11P55288 Vmn1r181-204ENSMUST00000227637 4587 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
Cdh11P55288 Eif3e-201ENSMUST00000022960 1506 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Cdh11P55288 Dnase1l1-202ENSMUST00000075821 1511 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Cdh11P55288 Vps50-203ENSMUST00000170873 3687 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Cdh11P55288 Olfr645-201ENSMUST00000057104 3677 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
Cdh11P55288 Mug4-ps-201ENSMUST00000203118 3578 ntBASIC5.98□□□□□ -1.45
Cdh11P55288 Rbms3-206ENSMUST00000111773 7908 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
Cdh11P55288 Olfr1275-203ENSMUST00000217539 1661 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Cdh11P55288 Rnd3-203ENSMUST00000154545 2967 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Cdh11P55288 Add3-201ENSMUST00000025999 4334 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
Cdh11P55288 Vmn2r114-201ENSMUST00000168033 2571 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Cdh11P55288 Mtus1-205ENSMUST00000118835 6426 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Cdh11P55288 Gm20489-201ENSMUST00000117736 1350 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Cdh11P55288 Gm30655-202ENSMUST00000222732 2808 ntTSL 5 BASIC5.98□□□□□ -1.45
Cdh11P55288 Gm25877-201ENSMUST00000104326 129 ntBASIC5.98□□□□□ -1.45
Cdh11P55288 Gm12468-201ENSMUST00000116189 404 ntBASIC5.98□□□□□ -1.45
Cdh11P55288 Olfr1118-201ENSMUST00000121296 996 ntAPPRIS P2 BASIC5.98□□□□□ -1.45
Cdh11P55288 Ndufb5-203ENSMUST00000122290 625 ntTSL 2 BASIC5.98□□□□□ -1.45
Cdh11P55288 1700025O08Rik-201ENSMUST00000123729 456 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Cdh11P55288 Gm12629-201ENSMUST00000145751 711 ntTSL 3 BASIC5.98□□□□□ -1.45
Cdh11P55288 Sumo2-207ENSMUST00000153892 1051 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Cdh11P55288 Gm25556-201ENSMUST00000158077 144 ntBASIC5.98□□□□□ -1.45
Cdh11P55288 Mpped2-201ENSMUST00000016530 1217 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Cdh11P55288 Pantr1-203ENSMUST00000176154 514 ntTSL 5 BASIC5.98□□□□□ -1.45
Cdh11P55288 AA465934-205ENSMUST00000177533 308 ntTSL 2 BASIC5.98□□□□□ -1.45
Cdh11P55288 1810053B23Rik-202ENSMUST00000185364 590 ntTSL 3 BASIC5.98□□□□□ -1.45
Cdh11P55288 Gm29353-201ENSMUST00000185801 620 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Cdh11P55288 Gm29529-201ENSMUST00000187154 714 ntTSL 3 BASIC5.98□□□□□ -1.45
Cdh11P55288 Gm28186-201ENSMUST00000187447 679 ntBASIC5.98□□□□□ -1.45
Cdh11P55288 Gm4856-201ENSMUST00000192696 1091 ntBASIC5.98□□□□□ -1.45
Cdh11P55288 1700102P08Rik-202ENSMUST00000192995 658 ntTSL 3 BASIC5.98□□□□□ -1.45
Cdh11P55288 4930533L02Rik-201ENSMUST00000194425 1160 ntBASIC5.98□□□□□ -1.45
Cdh11P55288 Gm43388-201ENSMUST00000197818 1225 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Cdh11P55288 Gm44227-201ENSMUST00000203576 241 ntBASIC5.98□□□□□ -1.45
Cdh11P55288 4933430N04Rik-202ENSMUST00000208031 1146 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Cdh11P55288 Gm44565-201ENSMUST00000208194 269 ntBASIC5.98□□□□□ -1.45
Cdh11P55288 Tecr-214ENSMUST00000212990 648 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Cdh11P55288 Gm30676-202ENSMUST00000214464 793 ntTSL 5 BASIC5.98□□□□□ -1.45
Cdh11P55288 Gm3678-201ENSMUST00000218888 492 ntBASIC5.98□□□□□ -1.45
Cdh11P55288 CT030170.6-203ENSMUST00000222523 1295 ntTSL 5 BASIC5.98□□□□□ -1.45
Cdh11P55288 Gm33489-201ENSMUST00000223171 673 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Cdh11P55288 AC154618.2-201ENSMUST00000228299 452 ntBASIC5.98□□□□□ -1.45
Cdh11P55288 Dusp21-201ENSMUST00000026018 845 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
Cdh11P55288 4930522N08Rik-201ENSMUST00000031274 916 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Cdh11P55288 Mup14-202ENSMUST00000075206 925 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Cdh11P55288 Gm23238-201ENSMUST00000083007 164 ntBASIC5.98□□□□□ -1.45
Cdh11P55288 Olfr517-201ENSMUST00000084753 1055 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
Cdh11P55288 Olfr461-201ENSMUST00000089490 942 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
Cdh11P55288 Olfr1131-201ENSMUST00000090712 930 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
Cdh11P55288 Olfr1471-201ENSMUST00000096203 945 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
Cdh11P55288 Faddos-201ENSMUST00000097928 1053 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Cdh11P55288 Sgip1-203ENSMUST00000080728 3712 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
Cdh11P55288 Dclre1c-201ENSMUST00000061852 7075 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
Cdh11P55288 Gm43211-201ENSMUST00000196901 1899 ntBASIC5.98□□□□□ -1.45
Cdh11P55288 Gm13749-201ENSMUST00000133244 1432 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Cdh11P55288 Fmn1-202ENSMUST00000099576 11817 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
Cdh11P55288 Gm35028-201ENSMUST00000215400 2587 ntTSL 5 BASIC5.98□□□□□ -1.45
Cdh11P55288 March1-208ENSMUST00000110259 3181 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Cdh11P55288 Rgs22-203ENSMUST00000172831 4006 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
Cdh11P55288 Gm26742-201ENSMUST00000181829 3340 ntTSL 5 BASIC5.97□□□□□ -1.45
Cdh11P55288 Lgi1-209ENSMUST00000199812 2262 ntTSL 5 BASIC5.97□□□□□ -1.45
Cdh11P55288 Psg-ps1-202ENSMUST00000206181 1943 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Cdh11P55288 Robo2-203ENSMUST00000117785 8124 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Cdh11P55288 Fanci-201ENSMUST00000036865 4645 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
Cdh11P55288 Gm5546-201ENSMUST00000056145 2777 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Cdh11P55288 9930038B18Rik-201ENSMUST00000151816 3966 ntTSL 5 BASIC5.97□□□□□ -1.45
Cdh11P55288 Lifr-203ENSMUST00000171588 9655 ntAPPRIS P3 TSL 5 BASIC5.97□□□□□ -1.45
Cdh11P55288 Gm7690-201ENSMUST00000190885 1399 ntBASIC5.97□□□□□ -1.45
Cdh11P55288 Gm20275-201ENSMUST00000215963 1387 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Cdh11P55288 Nexn-201ENSMUST00000046045 2564 ntAPPRIS P2 TSL 1 (best) BASIC5.97□□□□□ -1.45
Cdh11P55288 Vmn2r111-201ENSMUST00000092491 2574 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Cdh11P55288 Gla-201ENSMUST00000033621 3172 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Cdh11P55288 Atp13a5-203ENSMUST00000143373 3789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
Cdh11P55288 Klkb1-201ENSMUST00000026907 5249 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Cdh11P55288 Gm45457-201ENSMUST00000209931 3089 ntBASIC5.97□□□□□ -1.45
Cdh11P55288 Speer5-ps1-203ENSMUST00000217649 7431 ntTSL 5 BASIC5.97□□□□□ -1.45
Cdh11P55288 Nfib-201ENSMUST00000050872 8770 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Cdh11P55288 2610524H06Rik-201ENSMUST00000100850 947 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Cdh11P55288 Olfr446-201ENSMUST00000101461 927 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
Cdh11P55288 Trdv4-201ENSMUST00000103679 444 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
Cdh11P55288 Gm2178-201ENSMUST00000104927 357 ntBASIC5.97□□□□□ -1.45
Cdh11P55288 Gm12939-201ENSMUST00000117303 165 ntBASIC5.97□□□□□ -1.45
Cdh11P55288 Gm13566-201ENSMUST00000117428 1142 ntBASIC5.97□□□□□ -1.45
Cdh11P55288 Gm14755-201ENSMUST00000118037 384 ntBASIC5.97□□□□□ -1.45
Cdh11P55288 Gm5601-201ENSMUST00000118909 972 ntBASIC5.97□□□□□ -1.45
Cdh11P55288 Gm5843-201ENSMUST00000121631 476 ntBASIC5.97□□□□□ -1.45
Cdh11P55288 Gm11581-201ENSMUST00000122024 763 ntBASIC5.97□□□□□ -1.45
Cdh11P55288 Gm15743-201ENSMUST00000129645 242 ntTSL 3 BASIC5.97□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 74.5 ms