Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Obox2-201ENSMUST00000036575 1459 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Sox3P53784 Dennd2c-202ENSMUST00000172288 4979 ntAPPRIS P2 TSL 1 (best) BASIC6.35□□□□□ -1.39
Sox3P53784 Clasp1-202ENSMUST00000070989 7767 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
Sox3P53784 Cfap221-201ENSMUST00000037840 2511 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Sox3P53784 Ms4a1-201ENSMUST00000169159 3075 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Sox3P53784 Ncoa6-202ENSMUST00000109669 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
Sox3P53784 Lrp1-201ENSMUST00000049149 14888 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Sox3P53784 Gm5600-202ENSMUST00000211589 2331 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Sox3P53784 Gm24790-201ENSMUST00000104285 132 ntBASIC6.35□□□□□ -1.39
Sox3P53784 Gm15765-201ENSMUST00000118407 910 ntBASIC6.35□□□□□ -1.39
Sox3P53784 Gm8812-201ENSMUST00000118496 412 ntBASIC6.35□□□□□ -1.39
Sox3P53784 Gm12438-201ENSMUST00000122034 336 ntBASIC6.35□□□□□ -1.39
Sox3P53784 4930480G23Rik-201ENSMUST00000125909 1013 ntTSL 5 BASIC6.35□□□□□ -1.39
Sox3P53784 Gm12107-201ENSMUST00000132857 889 ntTSL 5 BASIC6.35□□□□□ -1.39
Sox3P53784 Gm10913-201ENSMUST00000133732 463 ntBASIC6.35□□□□□ -1.39
Sox3P53784 Casp12-204ENSMUST00000151332 1065 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Sox3P53784 Gm25219-201ENSMUST00000157545 330 ntBASIC6.35□□□□□ -1.39
Sox3P53784 Rd3l-201ENSMUST00000170525 984 ntAPPRIS P1 TSL 2 BASIC6.35□□□□□ -1.39
Sox3P53784 4931403E22Rik-201ENSMUST00000177048 668 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Sox3P53784 Sbp-202ENSMUST00000181985 920 ntAPPRIS P1 TSL 3 BASIC6.35□□□□□ -1.39
Sox3P53784 Gm8192-201ENSMUST00000182196 958 ntBASIC6.35□□□□□ -1.39
Sox3P53784 Olr1-203ENSMUST00000182784 570 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
Sox3P53784 Gm29357-201ENSMUST00000186877 698 ntBASIC6.35□□□□□ -1.39
Sox3P53784 Scgb2b33-201ENSMUST00000187413 334 ntBASIC6.35□□□□□ -1.39
Sox3P53784 Frmd8os-202ENSMUST00000187697 516 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Sox3P53784 1700006H21Rik-201ENSMUST00000188490 627 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Sox3P53784 Gm44169-201ENSMUST00000205133 359 ntTSL 2 BASIC6.35□□□□□ -1.39
Sox3P53784 Gm44809-201ENSMUST00000208305 993 ntBASIC6.35□□□□□ -1.39
Sox3P53784 AC122034.1-201ENSMUST00000227641 595 ntBASIC6.35□□□□□ -1.39
Sox3P53784 Olfr836-201ENSMUST00000074986 955 ntAPPRIS P2 BASIC6.35□□□□□ -1.39
Sox3P53784 Olfr960-201ENSMUST00000077060 1067 ntAPPRIS P2 BASIC6.35□□□□□ -1.39
Sox3P53784 Olfr1307-202ENSMUST00000099606 939 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Sox3P53784 Gen1-201ENSMUST00000166117 5268 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Sox3P53784 Gm29461-201ENSMUST00000189232 4176 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Sox3P53784 3110043O21Rik-202ENSMUST00000108126 2644 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Sox3P53784 Mug4-ps-201ENSMUST00000203118 3578 ntBASIC6.35□□□□□ -1.39
Sox3P53784 Gm17203-201ENSMUST00000164379 4017 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Sox3P53784 AC163354.1-201ENSMUST00000220620 1630 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Sox3P53784 Gm37945-201ENSMUST00000192536 4367 ntBASIC6.35□□□□□ -1.39
Sox3P53784 Vmn1r11-202ENSMUST00000226968 2522 ntAPPRIS P2 BASIC6.35□□□□□ -1.39
Sox3P53784 Pomp-202ENSMUST00000201120 3850 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Sox3P53784 Olfr239-203ENSMUST00000214406 3773 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Sox3P53784 Magi2-207ENSMUST00000197553 3264 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Sox3P53784 Mpdz-202ENSMUST00000107258 7241 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
Sox3P53784 Vmn2r11-201ENSMUST00000164875 2586 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
Sox3P53784 Dennd1b-201ENSMUST00000094505 8073 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Sox3P53784 Gm15229-201ENSMUST00000146636 1398 ntBASIC6.34□□□□□ -1.39
Sox3P53784 Clrn3-201ENSMUST00000053716 3305 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Sox3P53784 Vmn2r14-201ENSMUST00000170341 2547 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
Sox3P53784 Pfkfb2-203ENSMUST00000169659 2849 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.39
Sox3P53784 AC155234.1-201ENSMUST00000225610 2823 ntBASIC6.34□□□□□ -1.39
Sox3P53784 Bmx-201ENSMUST00000112263 2433 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
Sox3P53784 Gm9030-201ENSMUST00000218405 2410 ntBASIC6.34□□□□□ -1.39
Sox3P53784 Gm9029-201ENSMUST00000219232 2410 ntBASIC6.34□□□□□ -1.39
Sox3P53784 Gm33148-201ENSMUST00000210835 7227 ntTSL 5 BASIC6.34□□□□□ -1.39
Sox3P53784 Plek-201ENSMUST00000020321 3896 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Sox3P53784 Csde1-214ENSMUST00000199240 3457 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Sox3P53784 Gm12842-201ENSMUST00000117298 476 ntBASIC6.34□□□□□ -1.39
Sox3P53784 Gm14893-201ENSMUST00000117904 282 ntBASIC6.34□□□□□ -1.39
Sox3P53784 Gm11987-201ENSMUST00000118524 381 ntBASIC6.34□□□□□ -1.39
Sox3P53784 Gm16346-201ENSMUST00000129158 937 ntTSL 5 BASIC6.34□□□□□ -1.39
Sox3P53784 1700025D23Rik-201ENSMUST00000129365 846 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Sox3P53784 Crisp2-203ENSMUST00000131699 538 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Sox3P53784 Gm2709-201ENSMUST00000142979 350 ntBASIC6.34□□□□□ -1.39
Sox3P53784 Gm12963-203ENSMUST00000156271 388 ntTSL 5 BASIC6.34□□□□□ -1.39
Sox3P53784 Gm17096-201ENSMUST00000172037 733 ntTSL 5 BASIC6.34□□□□□ -1.39
Sox3P53784 Gm22655-201ENSMUST00000174949 96 ntBASIC6.34□□□□□ -1.39
Sox3P53784 Obox3-ps3-201ENSMUST00000177242 1004 ntBASIC6.34□□□□□ -1.39
Sox3P53784 2610528A11Rik-201ENSMUST00000179488 754 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Sox3P53784 Gm26654-201ENSMUST00000180455 256 ntTSL 3 BASIC6.34□□□□□ -1.39
Sox3P53784 1700003I22Rik-201ENSMUST00000186048 424 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Sox3P53784 Gm28846-201ENSMUST00000189161 368 ntBASIC6.34□□□□□ -1.39
Sox3P53784 Cd68-201ENSMUST00000018918 1230 ntAPPRIS P2 TSL 1 (best) BASIC6.34□□□□□ -1.39
Sox3P53784 1700108F19Rik-208ENSMUST00000191447 660 ntTSL 5 BASIC6.34□□□□□ -1.39
Sox3P53784 Gm43391-203ENSMUST00000198110 1001 ntTSL 5 BASIC6.34□□□□□ -1.39
Sox3P53784 Lncbate1-201ENSMUST00000211953 812 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Sox3P53784 Gm5055-201ENSMUST00000215697 581 ntBASIC6.34□□□□□ -1.39
Sox3P53784 Gm46332-202ENSMUST00000220320 516 ntTSL 3 BASIC6.34□□□□□ -1.39
Sox3P53784 CT030175.1-201ENSMUST00000220822 408 ntBASIC6.34□□□□□ -1.39
Sox3P53784 AC113125.2-201ENSMUST00000226837 362 ntBASIC6.34□□□□□ -1.39
Sox3P53784 AC154640.1-202ENSMUST00000227828 496 ntBASIC6.34□□□□□ -1.39
Sox3P53784 Gm22126-201ENSMUST00000083244 142 ntBASIC6.34□□□□□ -1.39
Sox3P53784 Pcdh15-208ENSMUST00000125006 4863 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Sox3P53784 Sirpb1c-202ENSMUST00000108349 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
Sox3P53784 Scn1a-202ENSMUST00000094951 5946 ntTSL 5 BASIC6.34□□□□□ -1.39
Sox3P53784 CT025619.1-201ENSMUST00000214294 2331 ntTSL 5 BASIC6.34□□□□□ -1.39
Sox3P53784 Rfc1-206ENSMUST00000204965 4751 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.39
Sox3P53784 Gm45786-201ENSMUST00000213021 2278 ntBASIC6.34□□□□□ -1.39
Sox3P53784 Cyp2j13-201ENSMUST00000030305 4374 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Sox3P53784 Asb4-201ENSMUST00000043294 3286 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Sox3P53784 E030032P16Rik-201ENSMUST00000198813 2931 ntBASIC6.34□□□□□ -1.39
Sox3P53784 Adgrl3-207ENSMUST00000118078 4871 ntTSL 5 BASIC6.34□□□□□ -1.39
Sox3P53784 Gm21781-201ENSMUST00000178920 4838 ntBASIC6.34□□□□□ -1.4
Sox3P53784 Cldn12-202ENSMUST00000115445 3477 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
Sox3P53784 Aox1-201ENSMUST00000001027 4423 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
Sox3P53784 Nudcd1-206ENSMUST00000227843 5077 ntAPPRIS P2 BASIC6.34□□□□□ -1.4
Sox3P53784 CAAA01119292.1-201ENSMUST00000226763 2766 ntBASIC6.34□□□□□ -1.4
Sox3P53784 Zfp638-202ENSMUST00000113835 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.4
Sox3P53784 Gm29123-201ENSMUST00000185808 3657 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
Sox3P53784 Ap4e1-201ENSMUST00000002063 4600 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 98.7 ms