Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Gm43335-201ENSMUST00000198299 3276 ntBASIC7.12□□□□□ -1.27
Shmt1P50431 AC130831.1-201ENSMUST00000224546 1474 ntBASIC7.12□□□□□ -1.27
Shmt1P50431 A630001G21Rik-202ENSMUST00000159122 2053 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Shmt1P50431 Daw1-203ENSMUST00000113436 1351 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Shmt1P50431 Slc22a8-202ENSMUST00000170817 3398 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
Shmt1P50431 AC132465.1-201ENSMUST00000219938 1307 ntBASIC7.12□□□□□ -1.27
Shmt1P50431 Scn3a-202ENSMUST00000100069 8550 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
Shmt1P50431 Lrp1-201ENSMUST00000049149 14888 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Shmt1P50431 Gm44194-201ENSMUST00000204222 3229 ntBASIC7.12□□□□□ -1.27
Shmt1P50431 Gm29571-201ENSMUST00000191547 1909 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Shmt1P50431 Tex35-203ENSMUST00000119526 679 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
Shmt1P50431 Gm2030-201ENSMUST00000119590 1129 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
Shmt1P50431 Gm15596-201ENSMUST00000121139 784 ntBASIC7.12□□□□□ -1.27
Shmt1P50431 Rps19-ps14-201ENSMUST00000121832 269 ntBASIC7.12□□□□□ -1.27
Shmt1P50431 Gm15322-201ENSMUST00000142621 739 ntTSL 2 BASIC7.12□□□□□ -1.27
Shmt1P50431 C230035I16Rik-202ENSMUST00000153753 643 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Shmt1P50431 Gm17546-201ENSMUST00000168960 733 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Shmt1P50431 Gm18808-201ENSMUST00000173316 462 ntBASIC7.12□□□□□ -1.27
Shmt1P50431 Gm20691-201ENSMUST00000176889 333 ntBASIC7.12□□□□□ -1.27
Shmt1P50431 Gm9285-201ENSMUST00000177691 697 ntBASIC7.12□□□□□ -1.27
Shmt1P50431 4932441J04Rik-201ENSMUST00000180708 729 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Shmt1P50431 Gm27005-201ENSMUST00000182783 921 ntBASIC7.12□□□□□ -1.27
Shmt1P50431 Gm29464-201ENSMUST00000187692 513 ntBASIC7.12□□□□□ -1.27
Shmt1P50431 Gm38283-201ENSMUST00000193041 695 ntBASIC7.12□□□□□ -1.27
Shmt1P50431 Gm17895-201ENSMUST00000194028 874 ntBASIC7.12□□□□□ -1.27
Shmt1P50431 Gm31925-202ENSMUST00000194266 537 ntTSL 5 BASIC7.12□□□□□ -1.27
Shmt1P50431 4930526M16Rik-201ENSMUST00000197305 954 ntBASIC7.12□□□□□ -1.27
Shmt1P50431 Gm43538-201ENSMUST00000200416 849 ntTSL 3 BASIC7.12□□□□□ -1.27
Shmt1P50431 Gm43459-201ENSMUST00000202093 331 ntBASIC7.12□□□□□ -1.27
Shmt1P50431 Tas2r146-ps1-201ENSMUST00000203065 934 ntBASIC7.12□□□□□ -1.27
Shmt1P50431 4930417O13Rik-204ENSMUST00000205000 999 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Shmt1P50431 Gm44656-201ENSMUST00000208428 490 ntBASIC7.12□□□□□ -1.27
Shmt1P50431 AC164881.1-201ENSMUST00000215648 664 ntTSL 3 BASIC7.12□□□□□ -1.27
Shmt1P50431 Olfr153-201ENSMUST00000217113 1258 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
Shmt1P50431 Gm35188-201ENSMUST00000218869 535 ntTSL 3 BASIC7.12□□□□□ -1.27
Shmt1P50431 AC167202.1-201ENSMUST00000219027 331 ntBASIC7.12□□□□□ -1.27
Shmt1P50431 AC116724.1-201ENSMUST00000227900 972 ntBASIC7.12□□□□□ -1.27
Shmt1P50431 Olfr350-201ENSMUST00000055130 939 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
Shmt1P50431 Olfr147-201ENSMUST00000056364 1166 ntAPPRIS P2 TSL 2 BASIC7.12□□□□□ -1.27
Shmt1P50431 Sprr2b-201ENSMUST00000061038 784 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Shmt1P50431 Olfr177-201ENSMUST00000072853 930 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
Shmt1P50431 Olfr1469-201ENSMUST00000077538 930 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
Shmt1P50431 Mir196a-1-201ENSMUST00000083612 102 ntBASIC7.12□□□□□ -1.27
Shmt1P50431 Olfr461-201ENSMUST00000089490 942 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
Shmt1P50431 CT025566.1-202ENSMUST00000224800 2511 ntBASIC7.12□□□□□ -1.27
Shmt1P50431 Stat4-201ENSMUST00000027277 2982 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Shmt1P50431 Heph-201ENSMUST00000033553 4743 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Shmt1P50431 Gm43421-201ENSMUST00000200044 2905 ntBASIC7.12□□□□□ -1.27
Shmt1P50431 Gm45358-201ENSMUST00000209492 2305 ntBASIC7.12□□□□□ -1.27
Shmt1P50431 Gm45297-201ENSMUST00000209893 3483 ntBASIC7.12□□□□□ -1.27
Shmt1P50431 P2ry12-204ENSMUST00000199609 2157 ntAPPRIS P1 TSL 3 BASIC7.12□□□□□ -1.27
Shmt1P50431 D830026I12Rik-203ENSMUST00000151170 1607 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Shmt1P50431 Olfr525-202ENSMUST00000214594 5137 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
Shmt1P50431 Eif3e-201ENSMUST00000022960 1506 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Shmt1P50431 Gm15930-201ENSMUST00000156603 2037 ntBASIC7.11□□□□□ -1.27
Shmt1P50431 Gje1-201ENSMUST00000020016 1480 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Shmt1P50431 Btnl10-202ENSMUST00000069941 4400 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Shmt1P50431 Gm14418-201ENSMUST00000108955 1415 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Shmt1P50431 Ncoa2-202ENSMUST00000068304 8006 ntTSL 5 BASIC7.11□□□□□ -1.27
Shmt1P50431 Gm45112-201ENSMUST00000208576 5125 ntBASIC7.11□□□□□ -1.27
Shmt1P50431 Nsd2-202ENSMUST00000066854 6919 ntAPPRIS P4 TSL 2 BASIC7.11□□□□□ -1.27
Shmt1P50431 Gm26608-202ENSMUST00000181503 1362 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Shmt1P50431 Olfr1457-203ENSMUST00000214561 1829 ntTSL 5 BASIC7.11□□□□□ -1.27
Shmt1P50431 Cul5-202ENSMUST00000120122 5945 ntTSL 5 BASIC7.11□□□□□ -1.27
Shmt1P50431 Ogdh-203ENSMUST00000093350 4075 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Shmt1P50431 Dennd6a-203ENSMUST00000224111 2692 ntBASIC7.11□□□□□ -1.27
Shmt1P50431 Gm42636-201ENSMUST00000197174 2239 ntBASIC7.11□□□□□ -1.27
Shmt1P50431 C730045M19Rik-201ENSMUST00000201944 1315 ntBASIC7.11□□□□□ -1.27
Shmt1P50431 Trappc13-203ENSMUST00000141557 3502 ntAPPRIS ALT1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Shmt1P50431 Gm20043-201ENSMUST00000222267 2565 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Shmt1P50431 Mphosph9-201ENSMUST00000031344 7747 ntAPPRIS P3 TSL 5 BASIC7.11□□□□□ -1.27
Shmt1P50431 Igkv4-57-1-201ENSMUST00000103356 373 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
Shmt1P50431 Olfr1330-202ENSMUST00000105035 1027 ntAPPRIS P1 TSL 3 BASIC7.11□□□□□ -1.27
Shmt1P50431 Gm15933-201ENSMUST00000117215 616 ntBASIC7.11□□□□□ -1.27
Shmt1P50431 Gm14116-201ENSMUST00000117733 805 ntBASIC7.11□□□□□ -1.27
Shmt1P50431 Gm12447-201ENSMUST00000119110 470 ntBASIC7.11□□□□□ -1.27
Shmt1P50431 Gm12135-201ENSMUST00000119170 466 ntBASIC7.11□□□□□ -1.27
Shmt1P50431 Gm21990-201ENSMUST00000124692 383 ntBASIC7.11□□□□□ -1.27
Shmt1P50431 Gm16152-201ENSMUST00000131663 872 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Shmt1P50431 Gm13598-201ENSMUST00000147939 625 ntTSL 5 BASIC7.11□□□□□ -1.27
Shmt1P50431 Gm8356-202ENSMUST00000164917 984 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
Shmt1P50431 Obox1-205ENSMUST00000173443 835 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
Shmt1P50431 Obox2-204ENSMUST00000174305 834 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
Shmt1P50431 Gm10640-202ENSMUST00000190947 1134 ntTSL 2 BASIC7.11□□□□□ -1.27
Shmt1P50431 Gm38006-201ENSMUST00000192421 697 ntTSL 5 BASIC7.11□□□□□ -1.27
Shmt1P50431 Ighv8-1-201ENSMUST00000194897 291 ntBASIC7.11□□□□□ -1.27
Shmt1P50431 Trav13n-1-201ENSMUST00000198359 331 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
Shmt1P50431 Ighv1-83-201ENSMUST00000199643 351 ntBASIC7.11□□□□□ -1.27
Shmt1P50431 1700028E10Rik-204ENSMUST00000201853 767 ntTSL 5 BASIC7.11□□□□□ -1.27
Shmt1P50431 Ghrl-202ENSMUST00000203363 400 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Shmt1P50431 Gm34701-202ENSMUST00000204685 360 ntBASIC7.11□□□□□ -1.27
Shmt1P50431 Gm44830-201ENSMUST00000207667 584 ntBASIC7.11□□□□□ -1.27
Shmt1P50431 4930401A07Rik-201ENSMUST00000214657 746 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Shmt1P50431 Gm30933-201ENSMUST00000217174 381 ntTSL 2 BASIC7.11□□□□□ -1.27
Shmt1P50431 AC079680.1-202ENSMUST00000219835 654 ntTSL 5 BASIC7.11□□□□□ -1.27
Shmt1P50431 Gm19169-201ENSMUST00000220109 1246 ntBASIC7.11□□□□□ -1.27
Shmt1P50431 AC192334.1-201ENSMUST00000221832 1268 ntTSL 5 BASIC7.11□□□□□ -1.27
Shmt1P50431 Gm272-201ENSMUST00000222073 919 ntBASIC7.11□□□□□ -1.27
Shmt1P50431 9130015A21Rik-202ENSMUST00000222153 837 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Shmt1P50431 AC162934.3-201ENSMUST00000223015 841 ntBASIC7.11□□□□□ -1.27
Retrieved 100 of 76,532 protein–RNA pairs in 139.3 ms