Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 AC165256.1-201ENSMUST00000216687 670 ntTSL 2 BASIC6.29□□□□□ -1.4
Cdx2P43241 Dcx-201ENSMUST00000033642 9074 ntAPPRIS ALT1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Cdx2P43241 Olfr691-201ENSMUST00000057528 969 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Cdx2P43241 Olfr481-201ENSMUST00000067143 939 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Cdx2P43241 Prl8a6-202ENSMUST00000080762 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Cdx2P43241 Cep112it-201ENSMUST00000143781 4813 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Cdx2P43241 Csde1-201ENSMUST00000029446 4318 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
Cdx2P43241 Spam1-203ENSMUST00000202569 2107 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Cdx2P43241 Stat4-201ENSMUST00000027277 2982 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Cdx2P43241 Prrg1-201ENSMUST00000114024 3900 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
Cdx2P43241 Eya4-202ENSMUST00000092665 5304 ntAPPRIS P2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Cdx2P43241 Adamts12-201ENSMUST00000061318 8579 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Cdx2P43241 7420700N18Rik-201ENSMUST00000209524 1644 ntTSL 5 BASIC6.28□□□□□ -1.4
Cdx2P43241 Poln-201ENSMUST00000042954 2897 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
Cdx2P43241 Add3-203ENSMUST00000111741 4520 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
Cdx2P43241 Nudcd1-206ENSMUST00000227843 5077 ntAPPRIS P2 BASIC6.28□□□□□ -1.4
Cdx2P43241 Rftn2-201ENSMUST00000027121 3677 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Cdx2P43241 Olfr54-202ENSMUST00000215409 4782 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Cdx2P43241 E230015B07Rik-202ENSMUST00000159884 2822 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Cdx2P43241 Gm28856-201ENSMUST00000189150 2828 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Cdx2P43241 Spire1-201ENSMUST00000045105 5033 ntAPPRIS P2 TSL 5 BASIC6.28□□□□□ -1.4
Cdx2P43241 Olfr671-203ENSMUST00000217091 3225 ntTSL 5 BASIC6.28□□□□□ -1.4
Cdx2P43241 Mbnl1-211ENSMUST00000192807 2906 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Cdx2P43241 Vmn1r218-204ENSMUST00000227160 9558 ntAPPRIS ALT2 BASIC6.28□□□□□ -1.4
Cdx2P43241 Serpina3c-201ENSMUST00000085050 2213 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Cdx2P43241 Foxp2-202ENSMUST00000115469 1293 ntTSL 5 BASIC6.28□□□□□ -1.4
Cdx2P43241 Gm14870-201ENSMUST00000118414 156 ntBASIC6.28□□□□□ -1.4
Cdx2P43241 Gm16511-201ENSMUST00000120019 564 ntBASIC6.28□□□□□ -1.4
Cdx2P43241 Calr-ps-201ENSMUST00000121776 485 ntBASIC6.28□□□□□ -1.4
Cdx2P43241 Olfr1021-ps1-201ENSMUST00000121914 1042 ntAPPRIS P1 TSL 3 BASIC6.28□□□□□ -1.4
Cdx2P43241 Fam229b-202ENSMUST00000124941 721 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Cdx2P43241 Gm13389-201ENSMUST00000142774 639 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Cdx2P43241 AI662270-203ENSMUST00000145461 592 ntTSL 5 BASIC6.28□□□□□ -1.4
Cdx2P43241 Gm14640-201ENSMUST00000145800 437 ntTSL 5 BASIC6.28□□□□□ -1.4
Cdx2P43241 1700109G15Rik-201ENSMUST00000150735 384 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Cdx2P43241 Igkv4-53-201ENSMUST00000166380 292 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Cdx2P43241 Gm22548-201ENSMUST00000174899 78 ntBASIC6.28□□□□□ -1.4
Cdx2P43241 Obox4-ps23-201ENSMUST00000175738 1137 ntBASIC6.28□□□□□ -1.4
Cdx2P43241 Obox4-ps33-201ENSMUST00000176649 1139 ntBASIC6.28□□□□□ -1.4
Cdx2P43241 Obox4-ps22-201ENSMUST00000179602 1137 ntBASIC6.28□□□□□ -1.4
Cdx2P43241 Obox4-ps13-201ENSMUST00000180123 1137 ntBASIC6.28□□□□□ -1.4
Cdx2P43241 Mir7020-201ENSMUST00000183787 70 ntBASIC6.28□□□□□ -1.4
Cdx2P43241 Mir6361-201ENSMUST00000185079 101 ntBASIC6.28□□□□□ -1.4
Cdx2P43241 1700003I22Rik-201ENSMUST00000186048 424 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Cdx2P43241 1700064J06Rik-201ENSMUST00000187551 386 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Cdx2P43241 Gm21721-202ENSMUST00000189253 1225 ntAPPRIS P1 TSL 3 BASIC6.28□□□□□ -1.4
Cdx2P43241 Gm7891-201ENSMUST00000190284 843 ntBASIC6.28□□□□□ -1.4
Cdx2P43241 Igkv4-83-201ENSMUST00000196933 334 ntBASIC6.28□□□□□ -1.4
Cdx2P43241 Gm42880-201ENSMUST00000198028 459 ntTSL 3 BASIC6.28□□□□□ -1.4
Cdx2P43241 BC049739-201ENSMUST00000202626 660 ntBASIC6.28□□□□□ -1.4
Cdx2P43241 Gm44312-201ENSMUST00000203536 469 ntBASIC6.28□□□□□ -1.4
Cdx2P43241 Gm34066-201ENSMUST00000210156 825 ntTSL 5 BASIC6.28□□□□□ -1.4
Cdx2P43241 Gm39329-201ENSMUST00000215849 798 ntTSL 5 BASIC6.28□□□□□ -1.4
Cdx2P43241 Gm9535-201ENSMUST00000218499 768 ntBASIC6.28□□□□□ -1.4
Cdx2P43241 AC154718.1-201ENSMUST00000226676 250 ntBASIC6.28□□□□□ -1.4
Cdx2P43241 AC152394.1-201ENSMUST00000227360 1086 ntBASIC6.28□□□□□ -1.4
Cdx2P43241 1700013H16Rik-201ENSMUST00000067940 1224 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Cdx2P43241 Klrc3-201ENSMUST00000071149 715 ntAPPRIS P2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Cdx2P43241 Olfr960-201ENSMUST00000077060 1067 ntAPPRIS P2 BASIC6.28□□□□□ -1.4
Cdx2P43241 Olfr461-201ENSMUST00000089490 942 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Cdx2P43241 Ctps2-202ENSMUST00000101095 1665 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Cdx2P43241 Bglap3-202ENSMUST00000107542 2051 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Cdx2P43241 Zfp935-204ENSMUST00000223247 1949 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Cdx2P43241 Olfr458-202ENSMUST00000216650 1799 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Cdx2P43241 Cntn1-202ENSMUST00000068378 3964 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Cdx2P43241 Crnn-201ENSMUST00000107300 1628 ntAPPRIS P1 TSL 3 BASIC6.28□□□□□ -1.4
Cdx2P43241 Gm36799-202ENSMUST00000215783 1634 ntTSL 5 BASIC6.28□□□□□ -1.4
Cdx2P43241 Zmat3-201ENSMUST00000029199 7797 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Cdx2P43241 Adcy10-203ENSMUST00000111440 5078 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
Cdx2P43241 Olfr239-203ENSMUST00000214406 3773 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Cdx2P43241 Olfr259-204ENSMUST00000216088 4023 ntAPPRIS P1 TSL 3 BASIC6.28□□□□□ -1.4
Cdx2P43241 Ddx24-201ENSMUST00000044923 2850 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
Cdx2P43241 Lrrcc1-206ENSMUST00000169079 5638 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
Cdx2P43241 Gm45250-201ENSMUST00000209414 3592 ntBASIC6.27□□□□□ -1.41
Cdx2P43241 4930511M06Rik-203ENSMUST00000137603 2651 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Cdx2P43241 4930550L24Rik-202ENSMUST00000118305 1684 ntAPPRIS P1 TSL 3 BASIC6.27□□□□□ -1.41
Cdx2P43241 Gm14635-202ENSMUST00000146535 1409 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Cdx2P43241 Grip1-208ENSMUST00000138410 3532 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
Cdx2P43241 Vmn2r14-201ENSMUST00000170341 2547 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Cdx2P43241 Grm8-202ENSMUST00000115323 3856 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
Cdx2P43241 Slc15a1-201ENSMUST00000088386 3121 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Cdx2P43241 Gm18796-201ENSMUST00000190440 1767 ntBASIC6.27□□□□□ -1.41
Cdx2P43241 Tmod2-206ENSMUST00000215036 1797 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Cdx2P43241 Dnah17-204ENSMUST00000132685 13612 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
Cdx2P43241 Cdh8-203ENSMUST00000128860 4594 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Cdx2P43241 Inpp5f-203ENSMUST00000118605 3220 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Cdx2P43241 Mapk8-205ENSMUST00000111945 5756 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Cdx2P43241 Gm3033-201ENSMUST00000112792 438 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Cdx2P43241 Gm13114-201ENSMUST00000117605 106 ntBASIC6.27□□□□□ -1.41
Cdx2P43241 Gm15621-201ENSMUST00000119162 364 ntBASIC6.27□□□□□ -1.41
Cdx2P43241 Gm2800-201ENSMUST00000122988 641 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Cdx2P43241 Gm12409-201ENSMUST00000147231 646 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Cdx2P43241 AA645442-201ENSMUST00000156020 285 ntTSL 2 BASIC6.27□□□□□ -1.41
Cdx2P43241 Gm22820-201ENSMUST00000157205 329 ntBASIC6.27□□□□□ -1.41
Cdx2P43241 Gm16226-201ENSMUST00000159950 760 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Cdx2P43241 Gm26665-201ENSMUST00000181378 839 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Cdx2P43241 Gm29082-201ENSMUST00000185207 448 ntTSL 5 BASIC6.27□□□□□ -1.41
Cdx2P43241 Gm29060-201ENSMUST00000185339 457 ntTSL 5 BASIC6.27□□□□□ -1.41
Cdx2P43241 Gm28887-201ENSMUST00000186065 294 ntTSL 5 BASIC6.27□□□□□ -1.41
Cdx2P43241 Gm28664-201ENSMUST00000186118 457 ntTSL 5 BASIC6.27□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 96.5 ms