Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Gm44382-201ENSMUST00000198683 122 ntBASIC8.66□□□□□ -1.02
Col18a1P39061 AC151968.1-201ENSMUST00000214437 568 ntTSL 5 BASIC8.66□□□□□ -1.02
Col18a1P39061 AC151971.3-201ENSMUST00000214694 404 ntBASIC8.66□□□□□ -1.02
Col18a1P39061 AC154556.1-201ENSMUST00000224587 885 ntBASIC8.66□□□□□ -1.02
Col18a1P39061 Anxa10-202ENSMUST00000034054 1222 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Col18a1P39061 Pate4-201ENSMUST00000034610 1072 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Col18a1P39061 Mir143-201ENSMUST00000083511 63 ntBASIC8.66□□□□□ -1.02
Col18a1P39061 Gm3892-202ENSMUST00000178043 3539 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Col18a1P39061 Gm10593-201ENSMUST00000178906 3539 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Col18a1P39061 CT009757.6-201ENSMUST00000220661 2312 ntBASIC8.66□□□□□ -1.02
Col18a1P39061 Alpk1-201ENSMUST00000029662 4795 ntAPPRIS P1 TSL 5 BASIC8.66□□□□□ -1.02
Col18a1P39061 Zfp704-201ENSMUST00000041124 13834 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Col18a1P39061 Gm14373-201ENSMUST00000122467 2158 ntBASIC8.66□□□□□ -1.02
Col18a1P39061 Vmn2r8-201ENSMUST00000172140 2547 ntAPPRIS P1 TSL 5 BASIC8.66□□□□□ -1.02
Col18a1P39061 Sorbs1-211ENSMUST00000224667 4313 ntAPPRIS ALT2 BASIC8.66□□□□□ -1.02
Col18a1P39061 AC163296.2-201ENSMUST00000220177 1315 ntBASIC8.66□□□□□ -1.02
Col18a1P39061 Ccdc191-206ENSMUST00000178400 3643 ntAPPRIS P2 TSL 5 BASIC8.66□□□□□ -1.02
Col18a1P39061 4833423E24Rik-201ENSMUST00000099923 2272 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Col18a1P39061 Gm42972-201ENSMUST00000196937 5617 ntBASIC8.66□□□□□ -1.02
Col18a1P39061 Otud7b-203ENSMUST00000098849 8046 ntAPPRIS P1 TSL 5 BASIC8.66□□□□□ -1.02
Col18a1P39061 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC8.66□□□□□ -1.02
Col18a1P39061 Pcdh15-225ENSMUST00000149977 5843 ntAPPRIS ALT2 TSL 5 BASIC8.66□□□□□ -1.02
Col18a1P39061 Cacna2d4-201ENSMUST00000037434 5803 ntAPPRIS P3 TSL 2 BASIC8.66□□□□□ -1.02
Col18a1P39061 Gm7361-201ENSMUST00000074148 2995 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Col18a1P39061 Gm4952-201ENSMUST00000092931 2212 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Col18a1P39061 Amelx-204ENSMUST00000112120 727 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Col18a1P39061 Crem-207ENSMUST00000126578 915 ntTSL 5 BASIC8.66□□□□□ -1.02
Col18a1P39061 Crem-236ENSMUST00000154715 1167 ntTSL 5 BASIC8.66□□□□□ -1.02
Col18a1P39061 Gm15401-203ENSMUST00000156497 378 ntTSL 3 BASIC8.66□□□□□ -1.02
Col18a1P39061 4930519F24Rik-201ENSMUST00000185764 579 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Col18a1P39061 Gm21489-201ENSMUST00000189668 818 ntBASIC8.66□□□□□ -1.02
Col18a1P39061 Pilrb2-202ENSMUST00000196162 969 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
Col18a1P39061 Gm42707-201ENSMUST00000196620 322 ntTSL 5 BASIC8.66□□□□□ -1.02
Col18a1P39061 1700016F12Rik-201ENSMUST00000198159 655 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Col18a1P39061 Gm43456-201ENSMUST00000202519 457 ntBASIC8.66□□□□□ -1.02
Col18a1P39061 Gm33242-201ENSMUST00000212130 1057 ntBASIC8.66□□□□□ -1.02
Col18a1P39061 Tmem45b-204ENSMUST00000217007 783 ntTSL 2 BASIC8.66□□□□□ -1.02
Col18a1P39061 AC170810.1-201ENSMUST00000228267 672 ntBASIC8.66□□□□□ -1.02
Col18a1P39061 Magea3-201ENSMUST00000079867 963 ntAPPRIS P1 BASIC8.66□□□□□ -1.02
Col18a1P39061 Tpbpb-201ENSMUST00000080766 850 ntAPPRIS P2 TSL 1 (best) BASIC8.66□□□□□ -1.02
Col18a1P39061 Olfr441-201ENSMUST00000095954 933 ntAPPRIS P1 BASIC8.66□□□□□ -1.02
Col18a1P39061 Alcam-203ENSMUST00000164728 1885 ntTSL 5 BASIC8.66□□□□□ -1.02
Col18a1P39061 Gm37953-201ENSMUST00000195293 1884 ntBASIC8.66□□□□□ -1.02
Col18a1P39061 Gm14565-201ENSMUST00000140021 2494 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Col18a1P39061 Gon4l-201ENSMUST00000081695 7440 ntAPPRIS P2 TSL 5 BASIC8.66□□□□□ -1.02
Col18a1P39061 Gon4l-202ENSMUST00000090942 7443 ntAPPRIS ALT2 TSL 5 BASIC8.66□□□□□ -1.02
Col18a1P39061 Cwc22-202ENSMUST00000111818 3255 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
Col18a1P39061 Son-201ENSMUST00000114036 7945 ntTSL 5 BASIC8.65□□□□□ -1.02
Col18a1P39061 5430419D17Rik-203ENSMUST00000208921 7948 ntAPPRIS P1 TSL 5 BASIC8.65□□□□□ -1.02
Col18a1P39061 Slc4a4-203ENSMUST00000130041 3335 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Col18a1P39061 Deptor-201ENSMUST00000023056 3300 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.02
Col18a1P39061 Zfp663-201ENSMUST00000073062 3157 ntAPPRIS P1 TSL 5 BASIC8.65□□□□□ -1.02
Col18a1P39061 Col6a6-203ENSMUST00000166431 7098 ntAPPRIS ALT2 TSL 5 BASIC8.65□□□□□ -1.02
Col18a1P39061 Pcdh15-208ENSMUST00000125006 4863 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Col18a1P39061 Pcdh15-232ENSMUST00000177420 4878 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Col18a1P39061 Myo15-203ENSMUST00000094135 11715 ntAPPRIS ALT2 TSL 5 BASIC8.65□□□□□ -1.02
Col18a1P39061 St3gal1-201ENSMUST00000092640 4985 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Col18a1P39061 Rnf43-209ENSMUST00000165679 4310 ntAPPRIS P1 TSL 5 BASIC8.65□□□□□ -1.02
Col18a1P39061 Olfr1026-203ENSMUST00000219615 1465 ntAPPRIS P1 TSL 5 BASIC8.65□□□□□ -1.02
Col18a1P39061 Gm26899-201ENSMUST00000181963 3328 ntTSL 5 BASIC8.65□□□□□ -1.02
Col18a1P39061 Gm25507-201ENSMUST00000116981 144 ntBASIC8.65□□□□□ -1.02
Col18a1P39061 Ufm1-202ENSMUST00000122330 637 ntTSL 2 BASIC8.65□□□□□ -1.02
Col18a1P39061 Gm11197-201ENSMUST00000145158 839 ntBASIC8.65□□□□□ -1.02
Col18a1P39061 Gm16226-203ENSMUST00000161197 395 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Col18a1P39061 Gm6541-201ENSMUST00000165542 561 ntBASIC8.65□□□□□ -1.02
Col18a1P39061 Mirt2-201ENSMUST00000175179 285 ntBASIC8.65□□□□□ -1.02
Col18a1P39061 Gm5885-201ENSMUST00000178578 648 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Col18a1P39061 Ank3-228ENSMUST00000182692 3833 ntTSL 5 BASIC8.65□□□□□ -1.02
Col18a1P39061 V1rg10-201ENSMUST00000183378 937 ntBASIC8.65□□□□□ -1.02
Col18a1P39061 Gm8502-201ENSMUST00000185708 901 ntBASIC8.65□□□□□ -1.02
Col18a1P39061 1700010H22Rik-202ENSMUST00000187592 1003 ntTSL 5 BASIC8.65□□□□□ -1.02
Col18a1P39061 Gm38384-201ENSMUST00000195413 1122 ntBASIC8.65□□□□□ -1.02
Col18a1P39061 Gm43132-201ENSMUST00000199106 792 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Col18a1P39061 AC134537.2-201ENSMUST00000217770 575 ntBASIC8.65□□□□□ -1.02
Col18a1P39061 A930023M06Rik-201ENSMUST00000223270 1093 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Col18a1P39061 AC122251.2-201ENSMUST00000227341 603 ntBASIC8.65□□□□□ -1.02
Col18a1P39061 Bicd1-201ENSMUST00000003544 2928 ntAPPRIS ALT1 TSL 5 BASIC8.65□□□□□ -1.03
Col18a1P39061 Mthfsd-201ENSMUST00000047282 8312 ntAPPRIS P3 TSL 1 (best) BASIC8.65□□□□□ -1.03
Col18a1P39061 Gm29670-201ENSMUST00000190228 2491 ntBASIC8.65□□□□□ -1.03
Col18a1P39061 Pik3c2g-215ENSMUST00000218528 2712 ntTSL 5 BASIC8.65□□□□□ -1.03
Col18a1P39061 Tial1-211ENSMUST00000165023 2003 ntAPPRIS ALT1 TSL 5 BASIC8.65□□□□□ -1.03
Col18a1P39061 Gm43876-201ENSMUST00000203831 3229 ntBASIC8.65□□□□□ -1.03
Col18a1P39061 Mef2c-222ENSMUST00000199019 4441 ntTSL 5 BASIC8.65□□□□□ -1.03
Col18a1P39061 A130050O07Rik-201ENSMUST00000191963 3023 ntBASIC8.65□□□□□ -1.03
Col18a1P39061 Tiam1-201ENSMUST00000002588 7290 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
Col18a1P39061 Gm37548-201ENSMUST00000194519 3814 ntBASIC8.65□□□□□ -1.03
Col18a1P39061 Tceal8-204ENSMUST00000163584 2358 ntAPPRIS P1 TSL 3 BASIC8.65□□□□□ -1.03
Col18a1P39061 Agtpbp1-201ENSMUST00000022040 8174 ntAPPRIS P3 TSL 1 (best) BASIC8.65□□□□□ -1.03
Col18a1P39061 Gm26563-202ENSMUST00000181152 1931 ntTSL 5 BASIC8.64□□□□□ -1.03
Col18a1P39061 Gm36908-201ENSMUST00000218080 1662 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Col18a1P39061 Zfp78-201ENSMUST00000086323 1443 ntAPPRIS ALT2 TSL 5 BASIC8.64□□□□□ -1.03
Col18a1P39061 Klhl1-201ENSMUST00000022666 6645 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Col18a1P39061 Tti1-202ENSMUST00000109522 3765 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Col18a1P39061 Serpinb8-202ENSMUST00000112706 4581 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Col18a1P39061 Dclk1-208ENSMUST00000198437 4315 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Col18a1P39061 Stra6l-201ENSMUST00000030011 3606 ntAPPRIS P3 TSL 1 (best) BASIC8.64□□□□□ -1.03
Col18a1P39061 Pcbp2-202ENSMUST00000078404 2829 ntTSL 2 BASIC8.64□□□□□ -1.03
Col18a1P39061 F930017D23Rik-201ENSMUST00000099888 1836 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Col18a1P39061 Gm9752-201ENSMUST00000048965 2659 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Col18a1P39061 Il17ra-201ENSMUST00000002976 7752 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Retrieved 100 of 76,532 protein–RNA pairs in 92.5 ms