Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Prkd3-201ENSMUST00000003191 5517 ntAPPRIS P3 TSL 1 (best) BASIC8.41□□□□□ -1.06
Hoxc9P09633 Zmat4-206ENSMUST00000207301 4207 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Hoxc9P09633 Olfr466-202ENSMUST00000214214 4192 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
Hoxc9P09633 A930030B08Rik-201ENSMUST00000207625 3965 ntBASIC8.41□□□□□ -1.06
Hoxc9P09633 Macrod2os2-201ENSMUST00000143227 3566 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Hoxc9P09633 Cmtr2-201ENSMUST00000056972 3545 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Hoxc9P09633 AC121793.2-201ENSMUST00000217127 2728 ntTSL 5 BASIC8.41□□□□□ -1.06
Hoxc9P09633 Gm45554-203ENSMUST00000211410 2137 ntTSL 5 BASIC8.41□□□□□ -1.06
Hoxc9P09633 F930017D23Rik-201ENSMUST00000099888 1836 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Hoxc9P09633 9330111N05Rik-201ENSMUST00000180409 1407 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Hoxc9P09633 Cfap57-201ENSMUST00000071972 4020 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
Hoxc9P09633 Gm9519-201ENSMUST00000206108 1337 ntBASIC8.41□□□□□ -1.06
Hoxc9P09633 AC158388.2-201ENSMUST00000223665 1314 ntBASIC8.41□□□□□ -1.06
Hoxc9P09633 C87499-202ENSMUST00000107142 672 ntAPPRIS ALT2 TSL 2 BASIC8.41□□□□□ -1.06
Hoxc9P09633 Taf7l-202ENSMUST00000113223 1155 ntTSL 5 BASIC8.41□□□□□ -1.06
Hoxc9P09633 Gm8855-201ENSMUST00000118888 878 ntBASIC8.41□□□□□ -1.06
Hoxc9P09633 Gm13389-201ENSMUST00000142774 639 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Hoxc9P09633 Gm15511-201ENSMUST00000152570 557 ntTSL 5 BASIC8.41□□□□□ -1.06
Hoxc9P09633 Gm15956-201ENSMUST00000153352 502 ntTSL 2 BASIC8.41□□□□□ -1.06
Hoxc9P09633 Gm25057-201ENSMUST00000157366 88 ntBASIC8.41□□□□□ -1.06
Hoxc9P09633 Gm6611-201ENSMUST00000163830 1272 ntBASIC8.41□□□□□ -1.06
Hoxc9P09633 Gm38122-201ENSMUST00000192679 885 ntBASIC8.41□□□□□ -1.06
Hoxc9P09633 4930512P04Rik-201ENSMUST00000197000 424 ntBASIC8.41□□□□□ -1.06
Hoxc9P09633 Gm5065-202ENSMUST00000207531 807 ntAPPRIS P1 TSL 3 BASIC8.41□□□□□ -1.06
Hoxc9P09633 Gm45646-201ENSMUST00000210983 441 ntTSL 5 BASIC8.41□□□□□ -1.06
Hoxc9P09633 AC166574.7-201ENSMUST00000228502 704 ntBASIC8.41□□□□□ -1.06
Hoxc9P09633 Uqcrh-ps1-201ENSMUST00000038391 270 ntBASIC8.41□□□□□ -1.06
Hoxc9P09633 4930550C14Rik-201ENSMUST00000005262 1237 ntAPPRIS P2 TSL 1 (best) BASIC8.41□□□□□ -1.06
Hoxc9P09633 Olfr836-201ENSMUST00000074986 955 ntAPPRIS P2 BASIC8.41□□□□□ -1.06
Hoxc9P09633 Olfr771-201ENSMUST00000078914 954 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
Hoxc9P09633 Sox6-205ENSMUST00000169129 5122 ntAPPRIS ALT2 TSL 1 (best) BASIC8.41□□□□□ -1.06
Hoxc9P09633 Dlg1-206ENSMUST00000115205 4364 ntAPPRIS ALT2 TSL 1 (best) BASIC8.41□□□□□ -1.06
Hoxc9P09633 Gm1965-202ENSMUST00000161362 2405 ntTSL 2 BASIC8.41□□□□□ -1.06
Hoxc9P09633 4930471D02Rik-201ENSMUST00000180815 2075 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Hoxc9P09633 Pcdh15-217ENSMUST00000134009 3300 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Hoxc9P09633 Olfr303-205ENSMUST00000216409 4106 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.06
Hoxc9P09633 Gm42523-201ENSMUST00000199378 2872 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Hoxc9P09633 Bdnf-209ENSMUST00000111050 3965 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Hoxc9P09633 Ccdc127-201ENSMUST00000022063 9559 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Hoxc9P09633 Vwa5a-202ENSMUST00000118144 3502 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Hoxc9P09633 Carf-209ENSMUST00000187978 5463 ntAPPRIS P3 TSL 1 (best) BASIC8.4□□□□□ -1.06
Hoxc9P09633 Clasp1-203ENSMUST00000165223 7207 ntAPPRIS ALT2 TSL 5 BASIC8.4□□□□□ -1.06
Hoxc9P09633 Gm44737-201ENSMUST00000206950 2355 ntTSL 5 BASIC8.4□□□□□ -1.06
Hoxc9P09633 Rdx-203ENSMUST00000163153 4131 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Hoxc9P09633 Hmgn3-203ENSMUST00000185315 1391 ntAPPRIS ALT2 TSL 2 BASIC8.4□□□□□ -1.06
Hoxc9P09633 Prkacb-203ENSMUST00000106137 4061 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Hoxc9P09633 Aox4-201ENSMUST00000040442 4973 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Hoxc9P09633 Nlrp3-202ENSMUST00000101148 4021 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Hoxc9P09633 4930518I15Rik-201ENSMUST00000099141 1331 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
Hoxc9P09633 Mup-ps16-201ENSMUST00000120085 596 ntBASIC8.4□□□□□ -1.06
Hoxc9P09633 Gm15194-201ENSMUST00000120453 434 ntBASIC8.4□□□□□ -1.06
Hoxc9P09633 Gm26665-201ENSMUST00000181378 839 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Hoxc9P09633 Mir6971-201ENSMUST00000183497 63 ntBASIC8.4□□□□□ -1.06
Hoxc9P09633 Gm27240-201ENSMUST00000183616 677 ntTSL 3 BASIC8.4□□□□□ -1.06
Hoxc9P09633 Gm5717-201ENSMUST00000198243 1062 ntBASIC8.4□□□□□ -1.06
Hoxc9P09633 Gm43382-201ENSMUST00000198954 838 ntBASIC8.4□□□□□ -1.06
Hoxc9P09633 Gm42886-201ENSMUST00000199214 466 ntBASIC8.4□□□□□ -1.06
Hoxc9P09633 Gm43263-201ENSMUST00000201619 560 ntTSL 5 BASIC8.4□□□□□ -1.06
Hoxc9P09633 Gm44930-201ENSMUST00000207545 489 ntTSL 5 BASIC8.4□□□□□ -1.06
Hoxc9P09633 AC079681.1-201ENSMUST00000219437 639 ntTSL 3 BASIC8.4□□□□□ -1.06
Hoxc9P09633 Gm19195-201ENSMUST00000222018 511 ntBASIC8.4□□□□□ -1.06
Hoxc9P09633 CT030254.1-201ENSMUST00000225450 1078 ntBASIC8.4□□□□□ -1.06
Hoxc9P09633 Osbpl9-219ENSMUST00000194478 2903 ntTSL 5 BASIC8.4□□□□□ -1.06
Hoxc9P09633 AC155941.4-201ENSMUST00000219731 2705 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Hoxc9P09633 Frmpd4-201ENSMUST00000112145 7924 ntAPPRIS P3 TSL 1 (best) BASIC8.4□□□□□ -1.07
Hoxc9P09633 Olfr11-202ENSMUST00000205631 3265 ntAPPRIS P1 TSL 3 BASIC8.4□□□□□ -1.07
Hoxc9P09633 Vangl1-202ENSMUST00000159388 3207 ntTSL 5 BASIC8.4□□□□□ -1.07
Hoxc9P09633 Vmn1r181-208ENSMUST00000228842 4491 ntAPPRIS P1 BASIC8.4□□□□□ -1.07
Hoxc9P09633 Cep85-202ENSMUST00000121566 3748 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.07
Hoxc9P09633 Il1rl1-201ENSMUST00000053043 5053 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
Hoxc9P09633 Vmn2r-ps103-201ENSMUST00000222960 2349 ntBASIC8.4□□□□□ -1.07
Hoxc9P09633 Vmn1r176-204ENSMUST00000227129 2955 ntAPPRIS P1 BASIC8.4□□□□□ -1.07
Hoxc9P09633 Vmn1r176-207ENSMUST00000228793 2959 ntAPPRIS P1 BASIC8.4□□□□□ -1.07
Hoxc9P09633 1810011H11Rik-201ENSMUST00000039191 1489 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Hoxc9P09633 Satb1-214ENSMUST00000176669 4407 ntAPPRIS P2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Hoxc9P09633 Tti1-201ENSMUST00000029179 3830 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Hoxc9P09633 Rnf180-202ENSMUST00000224011 3785 ntAPPRIS P2 BASIC8.39□□□□□ -1.07
Hoxc9P09633 Pdlim5-205ENSMUST00000170361 2010 ntTSL 5 BASIC8.39□□□□□ -1.07
Hoxc9P09633 Olfr701-202ENSMUST00000166880 1444 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Hoxc9P09633 Depdc1a-202ENSMUST00000106041 1971 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Hoxc9P09633 Ptch1-202ENSMUST00000192155 7002 ntAPPRIS ALT2 TSL 5 BASIC8.39□□□□□ -1.07
Hoxc9P09633 Mbtd1-204ENSMUST00000107852 1930 ntTSL 5 BASIC8.39□□□□□ -1.07
Hoxc9P09633 Gm8872-201ENSMUST00000197475 1341 ntBASIC8.39□□□□□ -1.07
Hoxc9P09633 Srek1ip1-201ENSMUST00000022230 2365 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Hoxc9P09633 Ifi207-201ENSMUST00000042610 3422 ntAPPRIS P2 TSL 5 BASIC8.39□□□□□ -1.07
Hoxc9P09633 Phactr4-202ENSMUST00000084249 2349 ntAPPRIS ALT2 TSL 5 BASIC8.39□□□□□ -1.07
Hoxc9P09633 Gm12099-201ENSMUST00000118660 750 ntBASIC8.39□□□□□ -1.07
Hoxc9P09633 Gm16074-201ENSMUST00000119524 444 ntBASIC8.39□□□□□ -1.07
Hoxc9P09633 M6pr-ps-201ENSMUST00000120481 830 ntBASIC8.39□□□□□ -1.07
Hoxc9P09633 Gm14325-202ENSMUST00000150650 310 ntTSL 2 BASIC8.39□□□□□ -1.07
Hoxc9P09633 Gm16161-201ENSMUST00000162239 290 ntTSL 2 BASIC8.39□□□□□ -1.07
Hoxc9P09633 Mup7-203ENSMUST00000166098 1033 ntAPPRIS P3 TSL 5 BASIC8.39□□□□□ -1.07
Hoxc9P09633 Gm6918-201ENSMUST00000167622 1222 ntBASIC8.39□□□□□ -1.07
Hoxc9P09633 Adam3-210ENSMUST00000171611 1202 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Hoxc9P09633 Gm29160-201ENSMUST00000190094 699 ntBASIC8.39□□□□□ -1.07
Hoxc9P09633 Ighv1-27-201ENSMUST00000194473 340 ntBASIC8.39□□□□□ -1.07
Hoxc9P09633 Gm31887-201ENSMUST00000197661 501 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Hoxc9P09633 CT025667.1-201ENSMUST00000225872 382 ntBASIC8.39□□□□□ -1.07
Hoxc9P09633 Mup4-201ENSMUST00000075973 922 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Hoxc9P09633 Gm24454-201ENSMUST00000083349 132 ntBASIC8.39□□□□□ -1.07
Retrieved 100 of 76,532 protein–RNA pairs in 102.5 ms