Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Gatad2b-205ENSMUST00000199754 7438 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
Trim35Q8C006 Ttc39b-203ENSMUST00000102823 8831 ntAPPRIS P2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trim35Q8C006 Gm45718-201ENSMUST00000207577 3794 ntBASIC9.39□□□□□ -0.91
Trim35Q8C006 AC158981.2-201ENSMUST00000227565 1537 ntBASIC9.39□□□□□ -0.91
Trim35Q8C006 Dst-205ENSMUST00000182314 2643 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Trim35Q8C006 Slc2a9-202ENSMUST00000067872 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trim35Q8C006 Nde1-202ENSMUST00000115795 2335 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Trim35Q8C006 Vmn1r35-205ENSMUST00000227961 1789 ntBASIC9.39□□□□□ -0.91
Trim35Q8C006 Blm-202ENSMUST00000170315 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trim35Q8C006 Ctnnd1-214ENSMUST00000111688 6146 ntTSL 5 BASIC9.39□□□□□ -0.91
Trim35Q8C006 Fam221b-201ENSMUST00000056474 2045 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trim35Q8C006 Tango6-201ENSMUST00000048359 4409 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trim35Q8C006 Olfr19-202ENSMUST00000206365 1967 ntAPPRIS P1 TSL 3 BASIC9.39□□□□□ -0.91
Trim35Q8C006 AC124561.2-201ENSMUST00000226657 1973 ntBASIC9.39□□□□□ -0.91
Trim35Q8C006 Opcml-202ENSMUST00000115243 6676 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Trim35Q8C006 Nrf1-202ENSMUST00000069808 1658 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
Trim35Q8C006 AC142266.1-202ENSMUST00000227784 3733 ntBASIC9.39□□□□□ -0.91
Trim35Q8C006 Nebl-201ENSMUST00000028080 5780 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Trim35Q8C006 Gm37937-201ENSMUST00000194130 2168 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Trim35Q8C006 Rdh9-201ENSMUST00000052652 2698 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trim35Q8C006 Gm10113-201ENSMUST00000072437 3150 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Trim35Q8C006 Adra2b-201ENSMUST00000071902 3936 ntAPPRIS P2 BASIC9.38□□□□□ -0.91
Trim35Q8C006 Ttyh1-206ENSMUST00000129423 4355 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trim35Q8C006 Gm5512-201ENSMUST00000218013 1353 ntBASIC9.38□□□□□ -0.91
Trim35Q8C006 Mir124-2hg-201ENSMUST00000185804 3844 ntBASIC9.38□□□□□ -0.91
Trim35Q8C006 Mab21l3-201ENSMUST00000061831 3558 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trim35Q8C006 Triml2-204ENSMUST00000210136 1552 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trim35Q8C006 Upf2-201ENSMUST00000060092 5174 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trim35Q8C006 Ambra1-201ENSMUST00000045699 4690 ntTSL 5 BASIC9.38□□□□□ -0.91
Trim35Q8C006 A530041M06Rik-201ENSMUST00000199690 2288 ntBASIC9.38□□□□□ -0.91
Trim35Q8C006 Tectb-201ENSMUST00000025936 2725 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trim35Q8C006 Gm43544-201ENSMUST00000196474 2472 ntBASIC9.38□□□□□ -0.91
Trim35Q8C006 Fmo5-201ENSMUST00000029729 2453 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trim35Q8C006 5730455P16Rik-201ENSMUST00000103225 4554 ntAPPRIS P2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trim35Q8C006 Pnisr-203ENSMUST00000108229 2922 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Trim35Q8C006 Acpp-202ENSMUST00000112590 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trim35Q8C006 Phactr1-202ENSMUST00000110161 1950 ntTSL 5 BASIC9.38□□□□□ -0.91
Trim35Q8C006 Gm15267-201ENSMUST00000120888 464 ntBASIC9.38□□□□□ -0.91
Trim35Q8C006 Gm26350-201ENSMUST00000157531 288 ntBASIC9.38□□□□□ -0.91
Trim35Q8C006 Gm22097-201ENSMUST00000157929 278 ntBASIC9.38□□□□□ -0.91
Trim35Q8C006 R3hcc1l-202ENSMUST00000160107 950 ntAPPRIS ALT2 TSL 2 BASIC9.38□□□□□ -0.91
Trim35Q8C006 Vmn2r-ps34-201ENSMUST00000177433 904 ntBASIC9.38□□□□□ -0.91
Trim35Q8C006 Gm24618-201ENSMUST00000177718 94 ntBASIC9.38□□□□□ -0.91
Trim35Q8C006 Gm22584-201ENSMUST00000177935 92 ntBASIC9.38□□□□□ -0.91
Trim35Q8C006 Gm23953-201ENSMUST00000178214 94 ntBASIC9.38□□□□□ -0.91
Trim35Q8C006 Gm22616-201ENSMUST00000179783 100 ntBASIC9.38□□□□□ -0.91
Trim35Q8C006 Gm26332-201ENSMUST00000179813 94 ntBASIC9.38□□□□□ -0.91
Trim35Q8C006 Gm22863-201ENSMUST00000180265 94 ntBASIC9.38□□□□□ -0.91
Trim35Q8C006 Gm18552-201ENSMUST00000187425 538 ntBASIC9.38□□□□□ -0.91
Trim35Q8C006 Ighv5-18-201ENSMUST00000193834 326 ntBASIC9.38□□□□□ -0.91
Trim35Q8C006 1700013M08Rik-201ENSMUST00000197709 683 ntTSL 3 BASIC9.38□□□□□ -0.91
Trim35Q8C006 Gm43122-202ENSMUST00000202259 526 ntTSL 2 BASIC9.38□□□□□ -0.91
Trim35Q8C006 Gm3428-204ENSMUST00000214488 1020 ntTSL 5 BASIC9.38□□□□□ -0.91
Trim35Q8C006 Gm29674-201ENSMUST00000218791 1139 ntTSL 5 BASIC9.38□□□□□ -0.91
Trim35Q8C006 AC165092.4-201ENSMUST00000225025 679 ntBASIC9.38□□□□□ -0.91
Trim35Q8C006 Rhox11-201ENSMUST00000054147 811 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trim35Q8C006 Defb35-201ENSMUST00000076786 267 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trim35Q8C006 Gm25937-201ENSMUST00000083912 107 ntBASIC9.38□□□□□ -0.91
Trim35Q8C006 1700008P02Rik-201ENSMUST00000091364 783 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trim35Q8C006 Rims2-201ENSMUST00000042917 4719 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trim35Q8C006 Zeb2-214ENSMUST00000177302 4020 ntAPPRIS P2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trim35Q8C006 Parva-201ENSMUST00000033030 4454 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trim35Q8C006 Stra6-214ENSMUST00000170397 3077 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Trim35Q8C006 Aftph-209ENSMUST00000177543 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trim35Q8C006 Cxcr1-202ENSMUST00000190313 1451 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
Trim35Q8C006 Srgap2-201ENSMUST00000097588 8026 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Trim35Q8C006 Patj-205ENSMUST00000107030 2104 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Trim35Q8C006 Zfp457-201ENSMUST00000049705 2117 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Trim35Q8C006 Supt7l-202ENSMUST00000200721 1657 ntTSL 5 BASIC9.38□□□□□ -0.91
Trim35Q8C006 Myo6-212ENSMUST00000184480 4139 ntTSL 5 BASIC9.38□□□□□ -0.91
Trim35Q8C006 Magt1-201ENSMUST00000033583 4115 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trim35Q8C006 Dclre1b-201ENSMUST00000029435 4345 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trim35Q8C006 Gm38336-201ENSMUST00000193040 2549 ntBASIC9.38□□□□□ -0.91
Trim35Q8C006 Gm38095-201ENSMUST00000192896 1402 ntBASIC9.38□□□□□ -0.91
Trim35Q8C006 Aldoart1-201ENSMUST00000078617 2052 ntBASIC9.38□□□□□ -0.91
Trim35Q8C006 D430042O09Rik-201ENSMUST00000069660 6148 ntAPPRIS P2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Trim35Q8C006 Olfr293-203ENSMUST00000215280 2683 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Trim35Q8C006 Pcsk2-201ENSMUST00000028905 4723 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trim35Q8C006 Gm37332-201ENSMUST00000195853 2844 ntBASIC9.37□□□□□ -0.91
Trim35Q8C006 Dsc3-201ENSMUST00000115848 5333 ntAPPRIS ALT2 TSL 2 BASIC9.37□□□□□ -0.91
Trim35Q8C006 Nt5c1b-202ENSMUST00000118657 1792 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trim35Q8C006 Nt5c1b-220ENSMUST00000223534 1798 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
Trim35Q8C006 Gykl1-201ENSMUST00000066193 1990 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
Trim35Q8C006 Gm28315-201ENSMUST00000189948 2168 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Trim35Q8C006 Kdelc1-202ENSMUST00000065767 2359 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trim35Q8C006 Pde8b-210ENSMUST00000162412 4035 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Trim35Q8C006 Pilra-201ENSMUST00000058897 2578 ntAPPRIS P2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trim35Q8C006 Lias-201ENSMUST00000031101 2996 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Trim35Q8C006 Gm5533-201ENSMUST00000070987 1343 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Trim35Q8C006 Nos1-202ENSMUST00000102557 4591 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
Trim35Q8C006 Trcg1-201ENSMUST00000093837 2701 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
Trim35Q8C006 Pcx-201ENSMUST00000068004 4148 ntAPPRIS ALT1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trim35Q8C006 Helz2-203ENSMUST00000121484 10063 ntTSL 5 BASIC9.37□□□□□ -0.91
Trim35Q8C006 Ccr9-204ENSMUST00000168910 2888 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trim35Q8C006 Gm42856-201ENSMUST00000200848 2852 ntBASIC9.37□□□□□ -0.91
Trim35Q8C006 Apol11b-202ENSMUST00000180949 2261 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Trim35Q8C006 1700008H02Rik-201ENSMUST00000201220 1684 ntBASIC9.37□□□□□ -0.91
Trim35Q8C006 Bdp1-204ENSMUST00000109379 7567 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
Trim35Q8C006 Akap2-204ENSMUST00000102902 6993 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Trim35Q8C006 Elavl2-206ENSMUST00000107116 1282 ntTSL 5 BASIC9.37□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 86.2 ms