Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Gabpb2-205ENSMUST00000136139 8661 ntAPPRIS P2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Usp47Q8BY87 Zim1-201ENSMUST00000002336 7693 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Usp47Q8BY87 Gm37057-201ENSMUST00000192624 1916 ntBASIC9.16□□□□□ -0.94
Usp47Q8BY87 Mbd5-201ENSMUST00000047413 8543 ntAPPRIS P3 TSL 1 (best) BASIC9.16□□□□□ -0.94
Usp47Q8BY87 AC129085.2-201ENSMUST00000223763 2800 ntBASIC9.16□□□□□ -0.94
Usp47Q8BY87 Fbxo3-202ENSMUST00000102565 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Usp47Q8BY87 4930547M16Rik-201ENSMUST00000181590 2400 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Usp47Q8BY87 Gm7982-202ENSMUST00000136313 1536 ntAPPRIS P5 TSL 5 BASIC9.16□□□□□ -0.94
Usp47Q8BY87 Gm42636-201ENSMUST00000197174 2239 ntBASIC9.16□□□□□ -0.94
Usp47Q8BY87 Ugt3a1-201ENSMUST00000022861 2244 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Usp47Q8BY87 Vmn2r16-201ENSMUST00000165180 2553 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
Usp47Q8BY87 Wdfy4-201ENSMUST00000061753 9681 ntAPPRIS P2 TSL 5 BASIC9.15□□□□□ -0.94
Usp47Q8BY87 Olfr947-ps1-203ENSMUST00000215471 2177 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Usp47Q8BY87 Trim43b-202ENSMUST00000189557 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Usp47Q8BY87 Gm43864-201ENSMUST00000204452 4028 ntBASIC9.15□□□□□ -0.94
Usp47Q8BY87 Gm14173-201ENSMUST00000117690 278 ntBASIC9.15□□□□□ -0.94
Usp47Q8BY87 Gm11972-201ENSMUST00000118514 389 ntBASIC9.15□□□□□ -0.94
Usp47Q8BY87 Gm8855-201ENSMUST00000118888 878 ntBASIC9.15□□□□□ -0.94
Usp47Q8BY87 Gm15618-201ENSMUST00000121610 452 ntBASIC9.15□□□□□ -0.94
Usp47Q8BY87 Serpina3e-ps-201ENSMUST00000165968 1228 ntBASIC9.15□□□□□ -0.94
Usp47Q8BY87 Gm21560-202ENSMUST00000177670 618 ntAPPRIS ALT2 TSL 5 BASIC9.15□□□□□ -0.94
Usp47Q8BY87 Gm3269-202ENSMUST00000178137 618 ntAPPRIS ALT2 TSL 5 BASIC9.15□□□□□ -0.94
Usp47Q8BY87 Gm3099-202ENSMUST00000178274 618 ntAPPRIS ALT2 TSL 5 BASIC9.15□□□□□ -0.94
Usp47Q8BY87 Gm3642-202ENSMUST00000179296 618 ntAPPRIS ALT2 TSL 5 BASIC9.15□□□□□ -0.94
Usp47Q8BY87 Gm3594-203ENSMUST00000179747 618 ntAPPRIS ALT2 TSL 5 BASIC9.15□□□□□ -0.94
Usp47Q8BY87 Gm27227-201ENSMUST00000183413 633 ntTSL 3 BASIC9.15□□□□□ -0.94
Usp47Q8BY87 Gm4332-201ENSMUST00000196114 346 ntBASIC9.15□□□□□ -0.94
Usp47Q8BY87 Gm42865-201ENSMUST00000197981 613 ntTSL 3 BASIC9.15□□□□□ -0.94
Usp47Q8BY87 Gm7492-201ENSMUST00000201745 725 ntBASIC9.15□□□□□ -0.94
Usp47Q8BY87 Gm45196-201ENSMUST00000206751 825 ntBASIC9.15□□□□□ -0.94
Usp47Q8BY87 AC104906.1-201ENSMUST00000218122 913 ntBASIC9.15□□□□□ -0.94
Usp47Q8BY87 Olfr532-201ENSMUST00000073226 930 ntAPPRIS P1 BASIC9.15□□□□□ -0.94
Usp47Q8BY87 Olfr771-201ENSMUST00000078914 954 ntAPPRIS P1 BASIC9.15□□□□□ -0.94
Usp47Q8BY87 Gm12763-201ENSMUST00000151344 1939 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Usp47Q8BY87 Olfr1338-202ENSMUST00000214922 2947 ntAPPRIS ALT1 TSL 5 BASIC9.15□□□□□ -0.94
Usp47Q8BY87 Ddx24-201ENSMUST00000044923 2850 ntAPPRIS P3 TSL 1 (best) BASIC9.15□□□□□ -0.94
Usp47Q8BY87 Gm29461-201ENSMUST00000189232 4176 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Usp47Q8BY87 Chn1-202ENSMUST00000102677 3760 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Usp47Q8BY87 Gm28874-201ENSMUST00000190917 3134 ntBASIC9.15□□□□□ -0.95
Usp47Q8BY87 Zfp263-207ENSMUST00000162207 2452 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
Usp47Q8BY87 Zfa-ps-202ENSMUST00000180673 3420 ntBASIC9.15□□□□□ -0.95
Usp47Q8BY87 Gm44271-201ENSMUST00000204525 2600 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
Usp47Q8BY87 Tpp1-201ENSMUST00000033184 3558 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Usp47Q8BY87 F930017D23Rik-201ENSMUST00000099888 1836 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
Usp47Q8BY87 Cnr1-202ENSMUST00000084736 5761 ntAPPRIS P1 TSL 2 BASIC9.15□□□□□ -0.95
Usp47Q8BY87 BC080695-201ENSMUST00000105765 2102 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Usp47Q8BY87 Olfr994-204ENSMUST00000217218 1460 ntAPPRIS P1 TSL 3 BASIC9.15□□□□□ -0.95
Usp47Q8BY87 Mapk1ip1l-201ENSMUST00000164235 4531 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Usp47Q8BY87 Rps15a-207ENSMUST00000172457 5130 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Usp47Q8BY87 Lix1-201ENSMUST00000115576 3116 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Usp47Q8BY87 Snora35-201ENSMUST00000104579 128 ntBASIC9.14□□□□□ -0.95
Usp47Q8BY87 Zfp973-201ENSMUST00000108985 1295 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
Usp47Q8BY87 Gm14640-201ENSMUST00000145800 437 ntTSL 5 BASIC9.14□□□□□ -0.95
Usp47Q8BY87 Lrrc3b-202ENSMUST00000163937 1424 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Usp47Q8BY87 Gm17137-202ENSMUST00000165729 957 ntBASIC9.14□□□□□ -0.95
Usp47Q8BY87 Olfr701-202ENSMUST00000166880 1444 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Usp47Q8BY87 Rnf32-211ENSMUST00000168460 1107 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Usp47Q8BY87 BC035044-202ENSMUST00000178918 466 ntAPPRIS ALT2 TSL 2 BASIC9.14□□□□□ -0.95
Usp47Q8BY87 Rpl31-ps23-201ENSMUST00000180440 388 ntBASIC9.14□□□□□ -0.95
Usp47Q8BY87 Gm26820-201ENSMUST00000180764 1008 ntTSL 5 BASIC9.14□□□□□ -0.95
Usp47Q8BY87 Gm29282-201ENSMUST00000190720 473 ntTSL 5 BASIC9.14□□□□□ -0.95
Usp47Q8BY87 Gm7048-201ENSMUST00000199395 1891 ntBASIC9.14□□□□□ -0.95
Usp47Q8BY87 Gm2602-201ENSMUST00000202112 571 ntBASIC9.14□□□□□ -0.95
Usp47Q8BY87 Mgam-206ENSMUST00000202779 3821 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Usp47Q8BY87 Stx3-206ENSMUST00000211047 870 ntTSL 5 BASIC9.14□□□□□ -0.95
Usp47Q8BY87 AC151904.3-201ENSMUST00000219266 895 ntBASIC9.14□□□□□ -0.95
Usp47Q8BY87 AC105407.1-201ENSMUST00000225684 614 ntBASIC9.14□□□□□ -0.95
Usp47Q8BY87 Vmn1r38-203ENSMUST00000227694 909 ntAPPRIS P1 BASIC9.14□□□□□ -0.95
Usp47Q8BY87 Snrpd1-201ENSMUST00000002551 837 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Usp47Q8BY87 Ssmem1-202ENSMUST00000031798 1155 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Usp47Q8BY87 Olfr282-201ENSMUST00000075851 928 ntAPPRIS P1 BASIC9.14□□□□□ -0.95
Usp47Q8BY87 Tns4-201ENSMUST00000017751 4755 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Usp47Q8BY87 Zfp157-201ENSMUST00000085856 5312 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Usp47Q8BY87 C130075A20Rik-201ENSMUST00000198178 4176 ntBASIC9.14□□□□□ -0.95
Usp47Q8BY87 Gm26742-201ENSMUST00000181829 3340 ntTSL 5 BASIC9.14□□□□□ -0.95
Usp47Q8BY87 Fgf10-201ENSMUST00000022246 4114 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Usp47Q8BY87 Vmn2r-ps133-201ENSMUST00000176979 2569 ntBASIC9.14□□□□□ -0.95
Usp47Q8BY87 Shprh-202ENSMUST00000054814 7225 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Usp47Q8BY87 Sptlc3-202ENSMUST00000110083 2227 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Usp47Q8BY87 Gm13578-201ENSMUST00000120849 590 ntBASIC9.13□□□□□ -0.95
Usp47Q8BY87 Gm14216-201ENSMUST00000136046 409 ntTSL 3 BASIC9.13□□□□□ -0.95
Usp47Q8BY87 1700026D11Rik-203ENSMUST00000144501 535 ntTSL 3 BASIC9.13□□□□□ -0.95
Usp47Q8BY87 Gm23894-201ENSMUST00000158107 313 ntBASIC9.13□□□□□ -0.95
Usp47Q8BY87 Gm7008-203ENSMUST00000171356 476 ntTSL 2 BASIC9.13□□□□□ -0.95
Usp47Q8BY87 0610031O16Rik-204ENSMUST00000185122 825 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Usp47Q8BY87 Gm29586-201ENSMUST00000185225 1104 ntTSL 5 BASIC9.13□□□□□ -0.95
Usp47Q8BY87 Gm28253-201ENSMUST00000186071 712 ntTSL 5 BASIC9.13□□□□□ -0.95
Usp47Q8BY87 Gm29178-203ENSMUST00000186312 1104 ntTSL 5 BASIC9.13□□□□□ -0.95
Usp47Q8BY87 Gm29234-201ENSMUST00000187452 1262 ntBASIC9.13□□□□□ -0.95
Usp47Q8BY87 Gm29587-201ENSMUST00000189898 332 ntTSL 5 BASIC9.13□□□□□ -0.95
Usp47Q8BY87 Gm29624-202ENSMUST00000190185 1104 ntTSL 5 BASIC9.13□□□□□ -0.95
Usp47Q8BY87 Gm28996-201ENSMUST00000190316 721 ntBASIC9.13□□□□□ -0.95
Usp47Q8BY87 Gm29179-209ENSMUST00000190621 1100 ntTSL 5 BASIC9.13□□□□□ -0.95
Usp47Q8BY87 4930480K02Rik-201ENSMUST00000203679 1054 ntBASIC9.13□□□□□ -0.95
Usp47Q8BY87 Gm20426-202ENSMUST00000204789 399 ntTSL 5 BASIC9.13□□□□□ -0.95
Usp47Q8BY87 Gm44571-201ENSMUST00000208092 533 ntBASIC9.13□□□□□ -0.95
Usp47Q8BY87 Gm30694-201ENSMUST00000209278 1230 ntBASIC9.13□□□□□ -0.95
Usp47Q8BY87 Gm7780-201ENSMUST00000214787 406 ntBASIC9.13□□□□□ -0.95
Usp47Q8BY87 AC122290.1-201ENSMUST00000225631 1078 ntBASIC9.13□□□□□ -0.95
Usp47Q8BY87 Vmn1r30-201ENSMUST00000078890 1053 ntAPPRIS P1 BASIC9.13□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 63.9 ms