Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Mup7-201ENSMUST00000079697 927 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
Smco3Q8BQM7 Mup19-201ENSMUST00000080606 927 ntAPPRIS P2 TSL 1 (best) BASIC5.27□□□□□ -1.57
Smco3Q8BQM7 Gm10247-201ENSMUST00000090395 333 ntBASIC5.27□□□□□ -1.57
Smco3Q8BQM7 Cx3cr1-202ENSMUST00000177637 3156 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Smco3Q8BQM7 Gm45548-201ENSMUST00000210076 3167 ntBASIC5.27□□□□□ -1.57
Smco3Q8BQM7 Taf13-204ENSMUST00000143054 2443 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Smco3Q8BQM7 3110067C02Rik-201ENSMUST00000120793 2117 ntBASIC5.27□□□□□ -1.57
Smco3Q8BQM7 Gm37079-201ENSMUST00000194114 2135 ntBASIC5.27□□□□□ -1.57
Smco3Q8BQM7 Gm30165-201ENSMUST00000218769 1961 ntTSL 5 BASIC5.27□□□□□ -1.57
Smco3Q8BQM7 Mboat2-204ENSMUST00000221952 6792 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
Smco3Q8BQM7 AC165260.6-206ENSMUST00000223884 3698 ntBASIC5.27□□□□□ -1.57
Smco3Q8BQM7 St18-212ENSMUST00000151281 3533 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Smco3Q8BQM7 Zranb1-205ENSMUST00000215716 2205 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
Smco3Q8BQM7 Zfp850-202ENSMUST00000180024 2070 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Smco3Q8BQM7 Gm36888-201ENSMUST00000195819 2945 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Smco3Q8BQM7 Soat1-201ENSMUST00000051396 2925 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Smco3Q8BQM7 Zfp35-201ENSMUST00000074941 3040 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Smco3Q8BQM7 1500004A13Rik-203ENSMUST00000183966 3743 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Smco3Q8BQM7 Olfr994-204ENSMUST00000217218 1460 ntAPPRIS P1 TSL 3 BASIC5.26□□□□□ -1.57
Smco3Q8BQM7 Ifi207-201ENSMUST00000042610 3422 ntAPPRIS P2 TSL 5 BASIC5.26□□□□□ -1.57
Smco3Q8BQM7 Gria2-201ENSMUST00000075316 10371 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
Smco3Q8BQM7 Gm9239-201ENSMUST00000186942 2557 ntBASIC5.26□□□□□ -1.57
Smco3Q8BQM7 Rpgr-201ENSMUST00000044598 3805 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
Smco3Q8BQM7 Olfr43-204ENSMUST00000215550 1854 ntAPPRIS P1 TSL 3 BASIC5.26□□□□□ -1.57
Smco3Q8BQM7 Myo1b-204ENSMUST00000114541 4616 ntTSL 5 BASIC5.26□□□□□ -1.57
Smco3Q8BQM7 Gm12018-201ENSMUST00000150694 3375 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Smco3Q8BQM7 Gm43526-201ENSMUST00000196666 1565 ntBASIC5.26□□□□□ -1.57
Smco3Q8BQM7 Matr3-ps2-201ENSMUST00000160839 1996 ntBASIC5.26□□□□□ -1.57
Smco3Q8BQM7 Scn9a-206ENSMUST00000164384 7530 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
Smco3Q8BQM7 Gm43874-201ENSMUST00000204853 2798 ntBASIC5.26□□□□□ -1.57
Smco3Q8BQM7 Gm22470-201ENSMUST00000104117 130 ntBASIC5.26□□□□□ -1.57
Smco3Q8BQM7 Lage3-202ENSMUST00000114152 746 ntTSL 2 BASIC5.26□□□□□ -1.57
Smco3Q8BQM7 Gm13311-201ENSMUST00000117863 379 ntBASIC5.26□□□□□ -1.57
Smco3Q8BQM7 Gm13265-201ENSMUST00000118090 421 ntBASIC5.26□□□□□ -1.57
Smco3Q8BQM7 Gm11976-201ENSMUST00000119236 295 ntBASIC5.26□□□□□ -1.57
Smco3Q8BQM7 Gm13438-201ENSMUST00000120100 573 ntBASIC5.26□□□□□ -1.57
Smco3Q8BQM7 Gm6451-201ENSMUST00000121488 717 ntBASIC5.26□□□□□ -1.57
Smco3Q8BQM7 Gm11688-201ENSMUST00000122145 308 ntBASIC5.26□□□□□ -1.57
Smco3Q8BQM7 Il4-204ENSMUST00000150568 605 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Smco3Q8BQM7 Gm15063-201ENSMUST00000152648 895 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Smco3Q8BQM7 Gm25969-201ENSMUST00000157166 132 ntBASIC5.26□□□□□ -1.57
Smco3Q8BQM7 Gm26183-201ENSMUST00000157685 139 ntBASIC5.26□□□□□ -1.57
Smco3Q8BQM7 Gm15809-201ENSMUST00000159361 661 ntTSL 5 BASIC5.26□□□□□ -1.57
Smco3Q8BQM7 Rnf32-211ENSMUST00000168460 1107 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Smco3Q8BQM7 Gm9047-201ENSMUST00000171317 682 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Smco3Q8BQM7 Gm20430-201ENSMUST00000172474 207 ntBASIC5.26□□□□□ -1.57
Smco3Q8BQM7 Znrd1as-203ENSMUST00000173814 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
Smco3Q8BQM7 Gm26381-201ENSMUST00000174895 92 ntBASIC5.26□□□□□ -1.57
Smco3Q8BQM7 Gm21392-201ENSMUST00000182950 972 ntBASIC5.26□□□□□ -1.57
Smco3Q8BQM7 Gm29650-201ENSMUST00000188485 742 ntBASIC5.26□□□□□ -1.57
Smco3Q8BQM7 Gm21301-201ENSMUST00000189476 699 ntBASIC5.26□□□□□ -1.57
Smco3Q8BQM7 Gm28341-201ENSMUST00000190883 472 ntBASIC5.26□□□□□ -1.57
Smco3Q8BQM7 Gm37506-201ENSMUST00000192008 143 ntBASIC5.26□□□□□ -1.57
Smco3Q8BQM7 Gm38164-201ENSMUST00000192810 330 ntBASIC5.26□□□□□ -1.57
Smco3Q8BQM7 Gm43141-201ENSMUST00000199695 274 ntBASIC5.26□□□□□ -1.57
Smco3Q8BQM7 Gm5305-201ENSMUST00000204010 746 ntBASIC5.26□□□□□ -1.57
Smco3Q8BQM7 Gm44931-201ENSMUST00000206056 545 ntBASIC5.26□□□□□ -1.57
Smco3Q8BQM7 Gm44692-201ENSMUST00000207441 901 ntTSL 3 BASIC5.26□□□□□ -1.57
Smco3Q8BQM7 Gm17997-201ENSMUST00000211801 840 ntBASIC5.26□□□□□ -1.57
Smco3Q8BQM7 Gm8804-201ENSMUST00000212292 798 ntBASIC5.26□□□□□ -1.57
Smco3Q8BQM7 Gm30132-202ENSMUST00000212825 819 ntTSL 3 BASIC5.26□□□□□ -1.57
Smco3Q8BQM7 Gm36435-201ENSMUST00000213341 1178 ntTSL 5 BASIC5.26□□□□□ -1.57
Smco3Q8BQM7 CT485607.3-201ENSMUST00000213361 672 ntBASIC5.26□□□□□ -1.57
Smco3Q8BQM7 Gm18914-201ENSMUST00000214625 616 ntBASIC5.26□□□□□ -1.57
Smco3Q8BQM7 Mobp-206ENSMUST00000214943 435 ntAPPRIS P1 TSL 3 BASIC5.26□□□□□ -1.57
Smco3Q8BQM7 4930486F22Rik-201ENSMUST00000218077 559 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Smco3Q8BQM7 AC151901.1-201ENSMUST00000218274 180 ntBASIC5.26□□□□□ -1.57
Smco3Q8BQM7 Gm3678-201ENSMUST00000218888 492 ntBASIC5.26□□□□□ -1.57
Smco3Q8BQM7 6030440G07Rik-201ENSMUST00000221849 1090 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Smco3Q8BQM7 AC157571.1-201ENSMUST00000222014 520 ntBASIC5.26□□□□□ -1.57
Smco3Q8BQM7 AC136376.1-201ENSMUST00000228496 950 ntBASIC5.26□□□□□ -1.57
Smco3Q8BQM7 Crisp4-201ENSMUST00000026876 1252 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
Smco3Q8BQM7 n-R5s56-201ENSMUST00000082521 105 ntBASIC5.26□□□□□ -1.57
Smco3Q8BQM7 Snora9-201ENSMUST00000082579 133 ntBASIC5.26□□□□□ -1.57
Smco3Q8BQM7 Defb18-201ENSMUST00000097818 258 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Smco3Q8BQM7 Rabep1-207ENSMUST00000178245 2460 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Smco3Q8BQM7 Gm16170-201ENSMUST00000156882 3754 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Smco3Q8BQM7 Tlr11-202ENSMUST00000185091 3207 ntAPPRIS P2 TSL 2 BASIC5.26□□□□□ -1.57
Smco3Q8BQM7 Nlrp1b-204ENSMUST00000108516 4134 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
Smco3Q8BQM7 Gm20754-202ENSMUST00000192642 1357 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Smco3Q8BQM7 Ifi44l-201ENSMUST00000046739 1376 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Smco3Q8BQM7 Ssbp1-202ENSMUST00000114779 4398 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Smco3Q8BQM7 Gm26544-201ENSMUST00000181404 2763 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Smco3Q8BQM7 Vmn1r90-202ENSMUST00000226264 7796 ntAPPRIS P2 BASIC5.26□□□□□ -1.57
Smco3Q8BQM7 Mbnl1-214ENSMUST00000193517 5151 ntAPPRIS ALT1 TSL 5 BASIC5.26□□□□□ -1.57
Smco3Q8BQM7 Sytl5-202ENSMUST00000086165 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
Smco3Q8BQM7 Spag17os-202ENSMUST00000145279 3219 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Smco3Q8BQM7 Nfatc3-206ENSMUST00000212742 3207 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
Smco3Q8BQM7 Gm37876-201ENSMUST00000194490 1591 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Smco3Q8BQM7 4921534H16Rik-202ENSMUST00000162911 2838 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Smco3Q8BQM7 Gm21846-201ENSMUST00000179257 3073 ntBASIC5.25□□□□□ -1.57
Smco3Q8BQM7 Gm10310-202ENSMUST00000213667 4661 ntAPPRIS P5 TSL 5 BASIC5.25□□□□□ -1.57
Smco3Q8BQM7 Lpp-203ENSMUST00000115314 14854 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Smco3Q8BQM7 Ampd1-202ENSMUST00000155034 2913 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Smco3Q8BQM7 Pkn2-210ENSMUST00000174422 2904 ntTSL 5 BASIC5.25□□□□□ -1.57
Smco3Q8BQM7 Prkag2os2-201ENSMUST00000123610 1432 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Smco3Q8BQM7 Olfr542-ps1-202ENSMUST00000218525 4039 ntTSL 5 BASIC5.25□□□□□ -1.57
Smco3Q8BQM7 Tmem167b-202ENSMUST00000106622 2752 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Smco3Q8BQM7 Npy2r-201ENSMUST00000029633 3364 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
Smco3Q8BQM7 Gm19084-201ENSMUST00000222939 1762 ntBASIC5.25□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms