Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Gm32846-201ENSMUST00000205665 842 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Sox1P53783 Gm44730-201ENSMUST00000205902 716 ntTSL 3 BASIC7.54□□□□□ -1.2
Sox1P53783 Gm44717-201ENSMUST00000208133 578 ntTSL 5 BASIC7.54□□□□□ -1.2
Sox1P53783 Gm18414-201ENSMUST00000210858 694 ntBASIC7.54□□□□□ -1.2
Sox1P53783 Gm31036-201ENSMUST00000212925 521 ntTSL 3 BASIC7.54□□□□□ -1.2
Sox1P53783 4930520K02Rik-201ENSMUST00000219522 388 ntTSL 3 BASIC7.54□□□□□ -1.2
Sox1P53783 Atp8b3-202ENSMUST00000219648 524 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Sox1P53783 AC155236.1-201ENSMUST00000220591 923 ntTSL 5 BASIC7.54□□□□□ -1.2
Sox1P53783 Ninj2-201ENSMUST00000035244 823 ntAPPRIS ALT2 TSL 2 BASIC7.54□□□□□ -1.2
Sox1P53783 Olfr714-201ENSMUST00000054629 954 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
Sox1P53783 Gm5514-201ENSMUST00000060477 306 ntBASIC7.54□□□□□ -1.2
Sox1P53783 Olfr1503-ps1-201ENSMUST00000076614 803 ntBASIC7.54□□□□□ -1.2
Sox1P53783 Gm26063-201ENSMUST00000083378 107 ntBASIC7.54□□□□□ -1.2
Sox1P53783 Olfr606-201ENSMUST00000098200 960 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
Sox1P53783 Olfr988-201ENSMUST00000099928 1076 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
Sox1P53783 Slc2a9-205ENSMUST00000129099 3462 ntAPPRIS ALT2 TSL 5 BASIC7.54□□□□□ -1.2
Sox1P53783 Taf13-204ENSMUST00000143054 2443 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Sox1P53783 Sec16b-203ENSMUST00000111700 4369 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Sox1P53783 Dlg2-203ENSMUST00000107193 4910 ntAPPRIS ALT2 TSL 5 BASIC7.54□□□□□ -1.2
Sox1P53783 Galnt7-202ENSMUST00000110316 3413 ntAPPRIS ALT2 TSL 1 (best) BASIC7.54□□□□□ -1.2
Sox1P53783 Gm5316-202ENSMUST00000185734 3096 ntBASIC7.54□□□□□ -1.2
Sox1P53783 Slc12a3-205ENSMUST00000212134 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC7.54□□□□□ -1.2
Sox1P53783 Gucy1b2-201ENSMUST00000022501 2711 ntAPPRIS P3 TSL 1 (best) BASIC7.54□□□□□ -1.2
Sox1P53783 Lgi1-206ENSMUST00000198045 1483 ntTSL 5 BASIC7.54□□□□□ -1.2
Sox1P53783 Slc4a8-201ENSMUST00000023776 11790 ntAPPRIS P3 TSL 1 (best) BASIC7.54□□□□□ -1.2
Sox1P53783 Hdlbp-202ENSMUST00000170883 6231 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Sox1P53783 Phf3-201ENSMUST00000088310 7561 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Sox1P53783 Ncapg-201ENSMUST00000117396 3703 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
Sox1P53783 Slc1a3-201ENSMUST00000005493 4163 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Sox1P53783 Vmn2r120-201ENSMUST00000165781 2571 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
Sox1P53783 Atg4a-ps-201ENSMUST00000117271 2115 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
Sox1P53783 Celf2-223ENSMUST00000182851 3587 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Sox1P53783 Olfr380-202ENSMUST00000121209 1669 ntAPPRIS P1 TSL 3 BASIC7.54□□□□□ -1.2
Sox1P53783 Gm43528-201ENSMUST00000199492 1674 ntBASIC7.54□□□□□ -1.2
Sox1P53783 Trim21-202ENSMUST00000106913 2682 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Sox1P53783 Gm28651-202ENSMUST00000227968 2693 ntBASIC7.54□□□□□ -1.2
Sox1P53783 AC132474.1-201ENSMUST00000214407 3686 ntBASIC7.54□□□□□ -1.2
Sox1P53783 4930407I10Rik-201ENSMUST00000100396 4673 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Sox1P53783 5330417C22Rik-201ENSMUST00000048012 3321 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Sox1P53783 Tom1l1-202ENSMUST00000107867 2439 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Sox1P53783 Fmr1-203ENSMUST00000114654 4061 ntAPPRIS ALT1 TSL 5 BASIC7.53□□□□□ -1.2
Sox1P53783 Exd1-203ENSMUST00000171024 5290 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Sox1P53783 Sirpb1c-202ENSMUST00000108349 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
Sox1P53783 Mllt3-202ENSMUST00000126353 1956 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Sox1P53783 Gdap1-201ENSMUST00000026879 3949 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Sox1P53783 E330034G19Rik-203ENSMUST00000161740 1544 ntAPPRIS P2 TSL 1 (best) BASIC7.53□□□□□ -1.2
Sox1P53783 Olfr1283-202ENSMUST00000204064 1625 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
Sox1P53783 Cacna1e-201ENSMUST00000004214 12697 ntTSL 5 BASIC7.53□□□□□ -1.2
Sox1P53783 Gm37114-201ENSMUST00000195065 1804 ntBASIC7.53□□□□□ -1.2
Sox1P53783 Olfr1324-202ENSMUST00000215270 5679 ntAPPRIS ALT2 TSL 2 BASIC7.53□□□□□ -1.2
Sox1P53783 Rpgr-206ENSMUST00000115534 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
Sox1P53783 Fpr3-202ENSMUST00000115565 1220 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
Sox1P53783 Gm22032-201ENSMUST00000116946 116 ntBASIC7.53□□□□□ -1.2
Sox1P53783 Gm12392-201ENSMUST00000118014 938 ntBASIC7.53□□□□□ -1.2
Sox1P53783 Gm13359-201ENSMUST00000119000 695 ntBASIC7.53□□□□□ -1.2
Sox1P53783 Gm13357-201ENSMUST00000120528 537 ntBASIC7.53□□□□□ -1.2
Sox1P53783 Gm13459-201ENSMUST00000121558 646 ntBASIC7.53□□□□□ -1.2
Sox1P53783 Gm16336-201ENSMUST00000126011 380 ntTSL 2 BASIC7.53□□□□□ -1.2
Sox1P53783 Gm14547-201ENSMUST00000138341 371 ntTSL 5 BASIC7.53□□□□□ -1.2
Sox1P53783 Gm26410-201ENSMUST00000157670 261 ntBASIC7.53□□□□□ -1.2
Sox1P53783 Spink10-206ENSMUST00000162511 684 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Sox1P53783 Vmn1r101-201ENSMUST00000164245 924 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
Sox1P53783 Vmn1r119-201ENSMUST00000164683 924 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
Sox1P53783 Vmn1r149-201ENSMUST00000165916 924 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
Sox1P53783 Olfr92-201ENSMUST00000168659 939 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
Sox1P53783 Vmn1r113-201ENSMUST00000168794 894 ntTSL 5 BASIC7.53□□□□□ -1.2
Sox1P53783 Obox1-202ENSMUST00000172463 783 ntAPPRIS P1 TSL 3 BASIC7.53□□□□□ -1.2
Sox1P53783 Gm4152-201ENSMUST00000172675 259 ntBASIC7.53□□□□□ -1.2
Sox1P53783 Gm16451-201ENSMUST00000173484 924 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
Sox1P53783 Vmn1r158-201ENSMUST00000174643 924 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
Sox1P53783 1110008L16Rik-203ENSMUST00000183654 943 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Sox1P53783 Gm28556-201ENSMUST00000187489 673 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Sox1P53783 1700111N16Rik-201ENSMUST00000188663 1133 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Sox1P53783 Amd-ps5-201ENSMUST00000198406 989 ntBASIC7.53□□□□□ -1.2
Sox1P53783 Gm34149-201ENSMUST00000203547 304 ntBASIC7.53□□□□□ -1.2
Sox1P53783 4930528H21Rik-201ENSMUST00000204264 495 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Sox1P53783 Gm44118-201ENSMUST00000204665 229 ntBASIC7.53□□□□□ -1.2
Sox1P53783 Gm36816-201ENSMUST00000204824 493 ntTSL 3 BASIC7.53□□□□□ -1.2
Sox1P53783 Gm44169-201ENSMUST00000205133 359 ntTSL 2 BASIC7.53□□□□□ -1.2
Sox1P53783 Gm4872-201ENSMUST00000205210 1299 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Sox1P53783 Olfr187-201ENSMUST00000206428 978 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
Sox1P53783 4930435C17Rik-202ENSMUST00000210759 974 ntTSL 5 BASIC7.53□□□□□ -1.2
Sox1P53783 Gm4556-201ENSMUST00000217808 355 ntBASIC7.53□□□□□ -1.2
Sox1P53783 Gm8290-201ENSMUST00000218202 477 ntBASIC7.53□□□□□ -1.2
Sox1P53783 Gm8137-201ENSMUST00000218997 463 ntBASIC7.53□□□□□ -1.2
Sox1P53783 Olfr1496-203ENSMUST00000219412 1067 ntAPPRIS P2 BASIC7.53□□□□□ -1.2
Sox1P53783 5033421B08Rik-202ENSMUST00000219595 1194 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Sox1P53783 Spata31-202ENSMUST00000221202 814 ntTSL 5 BASIC7.53□□□□□ -1.2
Sox1P53783 AC155305.1-201ENSMUST00000222207 319 ntBASIC7.53□□□□□ -1.2
Sox1P53783 AC164294.1-201ENSMUST00000224682 688 ntBASIC7.53□□□□□ -1.2
Sox1P53783 Olfr1496-201ENSMUST00000057390 1067 ntAPPRIS ALT1 BASIC7.53□□□□□ -1.2
Sox1P53783 Olfr792-201ENSMUST00000076575 936 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
Sox1P53783 Gm16442-201ENSMUST00000079099 924 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
Sox1P53783 Inpp5d-211ENSMUST00000170300 3942 ntTSL 2 BASIC7.53□□□□□ -1.2
Sox1P53783 Nlrp3-201ENSMUST00000079476 3933 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Sox1P53783 Krba1-204ENSMUST00000114572 4323 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Sox1P53783 Olfr1532-ps1-202ENSMUST00000207492 2414 ntAPPRIS P1 TSL 2 BASIC7.53□□□□□ -1.2
Sox1P53783 Mapk14-203ENSMUST00000114752 3148 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Sox1P53783 Gm44800-201ENSMUST00000207510 1855 ntBASIC7.53□□□□□ -1.2
Sox1P53783 Fer1l6-203ENSMUST00000161028 5714 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
Retrieved 100 of 76,532 protein–RNA pairs in 80.8 ms