Protein–RNA interactions for Protein: P09631

Hoxa9, Homeobox protein Hox-A9, mousemouse

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa9P09631 Gm21731-201ENSMUST00000079524 489 ntBASIC6.71□□□□□ -1.34
Hoxa9P09631 Tppp2-201ENSMUST00000008957 742 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Hoxa9P09631 Olfr1106-201ENSMUST00000099867 939 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Hoxa9P09631 Slc22a26-202ENSMUST00000120522 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
Hoxa9P09631 Poln-201ENSMUST00000042954 2897 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.34
Hoxa9P09631 Med12-203ENSMUST00000117203 6816 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
Hoxa9P09631 Sirpb1b-201ENSMUST00000091319 1499 ntAPPRIS P2 TSL 1 (best) BASIC6.71□□□□□ -1.34
Hoxa9P09631 Btbd3-201ENSMUST00000075410 4940 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Hoxa9P09631 Specc1-201ENSMUST00000049836 6091 ntTSL 5 BASIC6.71□□□□□ -1.34
Hoxa9P09631 Gm6558-201ENSMUST00000191934 1973 ntBASIC6.71□□□□□ -1.34
Hoxa9P09631 Olfr1015-203ENSMUST00000215945 2479 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
Hoxa9P09631 Platr8-201ENSMUST00000146110 1349 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Hoxa9P09631 Smarca2-246ENSMUST00000209085 1841 ntTSL 5 BASIC6.71□□□□□ -1.34
Hoxa9P09631 Gm37423-201ENSMUST00000194246 3342 ntBASIC6.71□□□□□ -1.34
Hoxa9P09631 Gm37685-201ENSMUST00000193507 2177 ntBASIC6.71□□□□□ -1.34
Hoxa9P09631 AC155941.4-201ENSMUST00000219731 2705 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Hoxa9P09631 Sgms2-201ENSMUST00000090246 5801 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Hoxa9P09631 Cd244-201ENSMUST00000004829 3760 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Hoxa9P09631 Gsdmc-201ENSMUST00000110125 2405 ntAPPRIS P2 TSL 1 (best) BASIC6.7□□□□□ -1.34
Hoxa9P09631 Gm38394-201ENSMUST00000179598 10156 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Hoxa9P09631 Ube2v2-203ENSMUST00000115777 4207 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Hoxa9P09631 Slmap-202ENSMUST00000090359 4076 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
Hoxa9P09631 Sirpb1c-204ENSMUST00000108352 1436 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
Hoxa9P09631 Usp37-201ENSMUST00000044260 7111 ntTSL 5 BASIC6.7□□□□□ -1.34
Hoxa9P09631 Zfp874a-202ENSMUST00000075255 3238 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Hoxa9P09631 Fhl4-201ENSMUST00000059383 3402 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Hoxa9P09631 Mapk10-205ENSMUST00000128869 2518 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Hoxa9P09631 Olfr770-203ENSMUST00000204250 1644 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Hoxa9P09631 Tshr-204ENSMUST00000221216 1638 ntTSL 5 BASIC6.7□□□□□ -1.34
Hoxa9P09631 Gm5084-202ENSMUST00000224064 3609 ntBASIC6.7□□□□□ -1.34
Hoxa9P09631 Ighv1-16-201ENSMUST00000103501 294 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
Hoxa9P09631 Ighv1-24-201ENSMUST00000103509 294 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
Hoxa9P09631 Gm23311-201ENSMUST00000104152 134 ntBASIC6.7□□□□□ -1.34
Hoxa9P09631 Gm22374-201ENSMUST00000104583 132 ntBASIC6.7□□□□□ -1.34
Hoxa9P09631 Gm13772-201ENSMUST00000118431 317 ntBASIC6.7□□□□□ -1.34
Hoxa9P09631 Gm5319-201ENSMUST00000118965 873 ntBASIC6.7□□□□□ -1.34
Hoxa9P09631 Gm11879-201ENSMUST00000121885 702 ntBASIC6.7□□□□□ -1.34
Hoxa9P09631 Gm14212-201ENSMUST00000122023 826 ntBASIC6.7□□□□□ -1.34
Hoxa9P09631 Spata3-203ENSMUST00000125083 704 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Hoxa9P09631 Tbata-208ENSMUST00000143207 982 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Hoxa9P09631 Gm5125-201ENSMUST00000148614 624 ntBASIC6.7□□□□□ -1.34
Hoxa9P09631 Gm4997-201ENSMUST00000154056 360 ntBASIC6.7□□□□□ -1.34
Hoxa9P09631 Gm22552-201ENSMUST00000157796 337 ntBASIC6.7□□□□□ -1.34
Hoxa9P09631 Gm23386-201ENSMUST00000158585 144 ntBASIC6.7□□□□□ -1.34
Hoxa9P09631 1700129C05Rik-202ENSMUST00000159858 784 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
Hoxa9P09631 Fam47e-207ENSMUST00000176621 746 ntTSL 3 BASIC6.7□□□□□ -1.34
Hoxa9P09631 Platr5-202ENSMUST00000181016 479 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Hoxa9P09631 Gm27507-201ENSMUST00000184199 93 ntBASIC6.7□□□□□ -1.34
Hoxa9P09631 Ktn1-202ENSMUST00000185343 3846 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
Hoxa9P09631 Ktn1-205ENSMUST00000186627 3840 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
Hoxa9P09631 Ktn1-213ENSMUST00000188330 3819 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
Hoxa9P09631 Gm28455-201ENSMUST00000189105 1290 ntBASIC6.7□□□□□ -1.34
Hoxa9P09631 Gm28586-201ENSMUST00000189857 456 ntBASIC6.7□□□□□ -1.34
Hoxa9P09631 Gm7270-201ENSMUST00000195818 1128 ntBASIC6.7□□□□□ -1.34
Hoxa9P09631 Gm45122-201ENSMUST00000206376 784 ntBASIC6.7□□□□□ -1.34
Hoxa9P09631 Gm44705-201ENSMUST00000206719 339 ntBASIC6.7□□□□□ -1.34
Hoxa9P09631 Gm34263-202ENSMUST00000214353 303 ntTSL 5 BASIC6.7□□□□□ -1.34
Hoxa9P09631 CT025579.4-201ENSMUST00000224598 627 ntBASIC6.7□□□□□ -1.34
Hoxa9P09631 AC113031.1-201ENSMUST00000227400 432 ntBASIC6.7□□□□□ -1.34
Hoxa9P09631 Ssmem1-202ENSMUST00000031798 1155 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Hoxa9P09631 4930555F03Rik-201ENSMUST00000033963 717 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Hoxa9P09631 1700109H08Rik-201ENSMUST00000008451 773 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Hoxa9P09631 Gm7731-201ENSMUST00000091759 470 ntBASIC6.7□□□□□ -1.34
Hoxa9P09631 Olfr1079-201ENSMUST00000099882 948 ntAPPRIS P2 BASIC6.7□□□□□ -1.34
Hoxa9P09631 Gm14615-201ENSMUST00000117575 1816 ntBASIC6.7□□□□□ -1.34
Hoxa9P09631 Gm3510-201ENSMUST00000180447 1455 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Hoxa9P09631 Serpina9-201ENSMUST00000058464 3571 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Hoxa9P09631 Cyp4a10-202ENSMUST00000094886 2052 ntAPPRIS ALT2 TSL 2 BASIC6.7□□□□□ -1.34
Hoxa9P09631 Gm30931-202ENSMUST00000211698 1320 ntTSL 3 BASIC6.7□□□□□ -1.34
Hoxa9P09631 AC138765.2-202ENSMUST00000228418 3435 ntBASIC6.7□□□□□ -1.34
Hoxa9P09631 Chl1-206ENSMUST00000205098 2464 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Hoxa9P09631 Gm18879-201ENSMUST00000221187 1537 ntBASIC6.7□□□□□ -1.34
Hoxa9P09631 Gm45073-201ENSMUST00000207688 4247 ntBASIC6.7□□□□□ -1.34
Hoxa9P09631 Gabpb2-202ENSMUST00000098873 8272 ntAPPRIS P2 TSL 5 BASIC6.7□□□□□ -1.34
Hoxa9P09631 Olfr1386-202ENSMUST00000204518 2553 ntAPPRIS P1 TSL 3 BASIC6.69□□□□□ -1.34
Hoxa9P09631 Utp20-201ENSMUST00000004470 8821 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
Hoxa9P09631 Gm37474-201ENSMUST00000194812 1814 ntBASIC6.69□□□□□ -1.34
Hoxa9P09631 Mef2c-227ENSMUST00000199432 3498 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Hoxa9P09631 AC135119.1-204ENSMUST00000228036 2663 ntBASIC6.69□□□□□ -1.34
Hoxa9P09631 Pkn2-210ENSMUST00000174422 2904 ntTSL 5 BASIC6.69□□□□□ -1.34
Hoxa9P09631 Gm4806-201ENSMUST00000222704 1690 ntBASIC6.69□□□□□ -1.34
Hoxa9P09631 Sytl2-207ENSMUST00000190837 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
Hoxa9P09631 Gm20877-201ENSMUST00000100105 1212 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
Hoxa9P09631 Trav8d-1-201ENSMUST00000103580 400 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
Hoxa9P09631 Traj18-201ENSMUST00000103723 66 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
Hoxa9P09631 Gm26422-201ENSMUST00000104276 132 ntBASIC6.69□□□□□ -1.34
Hoxa9P09631 Sirpb1c-205ENSMUST00000108354 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
Hoxa9P09631 Gm11271-201ENSMUST00000116054 440 ntBASIC6.69□□□□□ -1.34
Hoxa9P09631 Gm11799-201ENSMUST00000116110 460 ntBASIC6.69□□□□□ -1.34
Hoxa9P09631 4930503H13Rik-201ENSMUST00000118320 725 ntBASIC6.69□□□□□ -1.34
Hoxa9P09631 Gm4911-201ENSMUST00000119388 945 ntBASIC6.69□□□□□ -1.34
Hoxa9P09631 Gm11504-201ENSMUST00000120211 173 ntBASIC6.69□□□□□ -1.34
Hoxa9P09631 Gm3810-201ENSMUST00000122413 476 ntBASIC6.69□□□□□ -1.34
Hoxa9P09631 Scgn-202ENSMUST00000142826 470 ntTSL 5 BASIC6.69□□□□□ -1.34
Hoxa9P09631 Gm12867-201ENSMUST00000151216 457 ntTSL 3 BASIC6.69□□□□□ -1.34
Hoxa9P09631 Gm25374-201ENSMUST00000158158 101 ntBASIC6.69□□□□□ -1.34
Hoxa9P09631 Gm20432-201ENSMUST00000173716 250 ntBASIC6.69□□□□□ -1.34
Hoxa9P09631 Gm20917-201ENSMUST00000179922 990 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
Hoxa9P09631 Gm26820-201ENSMUST00000180764 1008 ntTSL 5 BASIC6.69□□□□□ -1.34
Hoxa9P09631 Gtpbp4-ps3-201ENSMUST00000184093 136 ntBASIC6.69□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 66.3 ms