Protein–RNA interactions for Protein: P03953

Cfd, Complement factor D, mousemouse

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CfdP03953 Bex6-201ENSMUST00000099990 764 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
CfdP03953 Nsun6-202ENSMUST00000076435 3042 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
CfdP03953 Gm37100-201ENSMUST00000193344 1353 ntBASIC5.37□□□□□ -1.55
CfdP03953 Rsrc2-203ENSMUST00000111515 4223 ntTSL 5 BASIC5.37□□□□□ -1.55
CfdP03953 Skint7-204ENSMUST00000163281 1423 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
CfdP03953 Rapgef6-204ENSMUST00000108894 3475 ntTSL 5 BASIC5.37□□□□□ -1.55
CfdP03953 Rhbdd1-202ENSMUST00000140020 3687 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CfdP03953 Gm5157-201ENSMUST00000185914 1581 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CfdP03953 Pde1a-203ENSMUST00000102652 1646 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CfdP03953 Tbx22-204ENSMUST00000168403 1715 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CfdP03953 Il18r1-206ENSMUST00000195684 2850 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
CfdP03953 Rgsl1-203ENSMUST00000141249 1752 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CfdP03953 Rapgef4-203ENSMUST00000102698 2982 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CfdP03953 Olfr446-203ENSMUST00000215686 4210 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
CfdP03953 Olfr446-204ENSMUST00000216199 4218 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
CfdP03953 Gm9602-201ENSMUST00000163325 2062 ntAPPRIS P5 TSL 1 (best) BASIC5.36□□□□□ -1.55
CfdP03953 Gm8356-201ENSMUST00000163636 2062 ntAPPRIS P5 TSL 5 BASIC5.36□□□□□ -1.55
CfdP03953 Gm42744-201ENSMUST00000196517 2147 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CfdP03953 Lilra6-201ENSMUST00000038176 2103 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CfdP03953 Ppargc1a-203ENSMUST00000132734 6464 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CfdP03953 Nxf7-202ENSMUST00000113163 2233 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CfdP03953 Gm38372-201ENSMUST00000194854 4028 ntBASIC5.36□□□□□ -1.55
CfdP03953 A930006L05Rik-201ENSMUST00000186821 2814 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CfdP03953 Itih4-204ENSMUST00000168782 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
CfdP03953 B530045E10Rik-204ENSMUST00000220146 3244 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CfdP03953 St18-208ENSMUST00000140079 5892 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CfdP03953 Gm26016-201ENSMUST00000104403 129 ntBASIC5.36□□□□□ -1.55
CfdP03953 Smpx-203ENSMUST00000112521 898 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CfdP03953 Gm12635-201ENSMUST00000117285 752 ntBASIC5.36□□□□□ -1.55
CfdP03953 Gm14070-201ENSMUST00000120773 428 ntBASIC5.36□□□□□ -1.55
CfdP03953 Xbp1-204ENSMUST00000149623 897 ntAPPRIS ALT2 TSL 2 BASIC5.36□□□□□ -1.55
CfdP03953 Gm15624-202ENSMUST00000154953 713 ntTSL 2 BASIC5.36□□□□□ -1.55
CfdP03953 Gm23822-201ENSMUST00000158739 128 ntBASIC5.36□□□□□ -1.55
CfdP03953 Igkv4-53-201ENSMUST00000166380 292 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
CfdP03953 Gm3242-201ENSMUST00000171273 485 ntBASIC5.36□□□□□ -1.55
CfdP03953 Gypc-201ENSMUST00000172434 612 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
CfdP03953 Gm9529-201ENSMUST00000177598 579 ntBASIC5.36□□□□□ -1.55
CfdP03953 Gm5930-202ENSMUST00000178002 489 ntTSL 5 BASIC5.36□□□□□ -1.55
CfdP03953 Gm26662-201ENSMUST00000181129 548 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CfdP03953 Gm26901-201ENSMUST00000181554 1193 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CfdP03953 Smpx-208ENSMUST00000190091 1087 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CfdP03953 Gm10640-202ENSMUST00000190947 1134 ntTSL 2 BASIC5.36□□□□□ -1.55
CfdP03953 1700066C05Rik-201ENSMUST00000191029 407 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CfdP03953 Gm19124-201ENSMUST00000191041 832 ntBASIC5.36□□□□□ -1.55
CfdP03953 Gm37376-201ENSMUST00000192176 453 ntBASIC5.36□□□□□ -1.55
CfdP03953 Gm37620-201ENSMUST00000192910 501 ntBASIC5.36□□□□□ -1.55
CfdP03953 Gm43147-201ENSMUST00000196944 542 ntBASIC5.36□□□□□ -1.55
CfdP03953 Gm20052-204ENSMUST00000202443 648 ntTSL 2 BASIC5.36□□□□□ -1.55
CfdP03953 Gm18838-201ENSMUST00000204855 886 ntBASIC5.36□□□□□ -1.55
CfdP03953 Gm45156-201ENSMUST00000207255 439 ntBASIC5.36□□□□□ -1.55
CfdP03953 E230032D23Rik-202ENSMUST00000207959 451 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CfdP03953 E230032D23Rik-203ENSMUST00000208797 856 ntBASIC5.36□□□□□ -1.55
CfdP03953 Gm16475-202ENSMUST00000209033 528 ntBASIC5.36□□□□□ -1.55
CfdP03953 Gm36435-201ENSMUST00000213341 1178 ntTSL 5 BASIC5.36□□□□□ -1.55
CfdP03953 AC154573.2-201ENSMUST00000224174 378 ntBASIC5.36□□□□□ -1.55
CfdP03953 AC091237.1-201ENSMUST00000224911 637 ntBASIC5.36□□□□□ -1.55
CfdP03953 AC125064.1-201ENSMUST00000225801 295 ntBASIC5.36□□□□□ -1.55
CfdP03953 Tmem265-201ENSMUST00000084563 1054 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CfdP03953 Rpl23a-ps1-201ENSMUST00000085632 465 ntBASIC5.36□□□□□ -1.55
CfdP03953 Olfr1087-202ENSMUST00000214141 3861 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
CfdP03953 Dtna-203ENSMUST00000220904 3860 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CfdP03953 Gm26645-201ENSMUST00000181076 1316 ntBASIC5.36□□□□□ -1.55
CfdP03953 Gm43302-201ENSMUST00000050011 4310 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CfdP03953 Gm28673-201ENSMUST00000186562 1498 ntTSL 5 BASIC5.36□□□□□ -1.55
CfdP03953 Gm37344-203ENSMUST00000195490 1498 ntTSL 5 BASIC5.36□□□□□ -1.55
CfdP03953 Gm29198-201ENSMUST00000190102 1512 ntTSL 5 BASIC5.36□□□□□ -1.55
CfdP03953 Ifi205-201ENSMUST00000059226 1613 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CfdP03953 Gm10258-201ENSMUST00000091270 2123 ntBASIC5.36□□□□□ -1.55
CfdP03953 Gm38118-201ENSMUST00000192052 2222 ntBASIC5.36□□□□□ -1.55
CfdP03953 Spata6-203ENSMUST00000084354 2239 ntTSL 5 BASIC5.36□□□□□ -1.55
CfdP03953 Skil-201ENSMUST00000029194 6717 ntAPPRIS P3 TSL 5 BASIC5.36□□□□□ -1.55
CfdP03953 9430062P05Rik-201ENSMUST00000192703 3345 ntBASIC5.36□□□□□ -1.55
CfdP03953 Trhr-201ENSMUST00000038856 3608 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CfdP03953 Atp8b4-202ENSMUST00000040149 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CfdP03953 Gm43611-201ENSMUST00000196656 4352 ntBASIC5.36□□□□□ -1.55
CfdP03953 Erc2-208ENSMUST00000210924 4871 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CfdP03953 Vmn1r220-204ENSMUST00000227950 6238 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
CfdP03953 Gm10825-201ENSMUST00000180537 4478 ntTSL 2 BASIC5.35□□□□□ -1.55
CfdP03953 Gm26581-201ENSMUST00000181953 4479 ntTSL 2 BASIC5.35□□□□□ -1.55
CfdP03953 Gm5415-201ENSMUST00000171322 3609 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
CfdP03953 Csde1-214ENSMUST00000199240 3457 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CfdP03953 Lrrtm4-203ENSMUST00000126399 3050 ntAPPRIS ALT1 TSL 5 BASIC5.35□□□□□ -1.55
CfdP03953 Gm5427-201ENSMUST00000217680 2591 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CfdP03953 Cnga1-204ENSMUST00000169997 2251 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
CfdP03953 Cep57l1-202ENSMUST00000105505 2071 ntAPPRIS P3 TSL 5 BASIC5.35□□□□□ -1.55
CfdP03953 Gm18701-201ENSMUST00000188281 1536 ntBASIC5.35□□□□□ -1.55
CfdP03953 4930517E11Rik-201ENSMUST00000129584 1457 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CfdP03953 Fbxw25-201ENSMUST00000163839 1490 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CfdP03953 Csde1-215ENSMUST00000199420 4185 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
CfdP03953 Pcdh15-203ENSMUST00000105424 6932 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
CfdP03953 Pcdh15-202ENSMUST00000092420 6917 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
CfdP03953 Il1b-201ENSMUST00000028881 1356 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CfdP03953 Ifi44l-201ENSMUST00000046739 1376 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CfdP03953 Gm23529-201ENSMUST00000104562 132 ntBASIC5.35□□□□□ -1.55
CfdP03953 Gm14382-201ENSMUST00000117374 437 ntBASIC5.35□□□□□ -1.55
CfdP03953 Gm13311-201ENSMUST00000117863 379 ntBASIC5.35□□□□□ -1.55
CfdP03953 Gm12331-201ENSMUST00000119927 622 ntBASIC5.35□□□□□ -1.55
CfdP03953 Gm12115-201ENSMUST00000119969 447 ntBASIC5.35□□□□□ -1.55
CfdP03953 Gm15743-201ENSMUST00000129645 242 ntTSL 3 BASIC5.35□□□□□ -1.55
CfdP03953 Gm11444-201ENSMUST00000146433 575 ntAPPRIS P1 TSL 3 BASIC5.35□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 80.9 ms