Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Ktn1-205ENSMUST00000186627 3840 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
Sox3P53784 Ktn1-213ENSMUST00000188330 3819 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
Sox3P53784 Aox4-201ENSMUST00000040442 4973 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Sox3P53784 AC152922.2-201ENSMUST00000213353 3879 ntBASIC6.39□□□□□ -1.39
Sox3P53784 Zc3h12b-201ENSMUST00000082183 2831 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Sox3P53784 Pkn2-210ENSMUST00000174422 2904 ntTSL 5 BASIC6.39□□□□□ -1.39
Sox3P53784 4930444G20Rik-201ENSMUST00000092672 1773 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Sox3P53784 Il1rapl1-201ENSMUST00000078875 2091 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Sox3P53784 C530050E15Rik-201ENSMUST00000181373 3837 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Sox3P53784 Gm43187-201ENSMUST00000200652 2397 ntBASIC6.38□□□□□ -1.39
Sox3P53784 Olfr462-203ENSMUST00000213928 5598 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Sox3P53784 Fmr1-204ENSMUST00000114655 4199 ntAPPRIS P5 TSL 5 BASIC6.38□□□□□ -1.39
Sox3P53784 A830082K12Rik-207ENSMUST00000183171 4176 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Sox3P53784 Cyld-202ENSMUST00000098519 7954 ntAPPRIS ALT1 TSL 5 BASIC6.38□□□□□ -1.39
Sox3P53784 Trps1-204ENSMUST00000183757 6202 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
Sox3P53784 Slamf1-201ENSMUST00000015460 2693 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Sox3P53784 Zfp78-203ENSMUST00000207314 4675 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
Sox3P53784 Gm8700-201ENSMUST00000222187 3054 ntBASIC6.38□□□□□ -1.39
Sox3P53784 Ikzf3-201ENSMUST00000103141 3658 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Sox3P53784 Tcrg-V7-201ENSMUST00000103553 368 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Sox3P53784 Lrrc51-208ENSMUST00000106968 766 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
Sox3P53784 B4galt4-202ENSMUST00000114708 734 ntTSL 2 BASIC6.38□□□□□ -1.39
Sox3P53784 Gm13835-201ENSMUST00000118459 685 ntBASIC6.38□□□□□ -1.39
Sox3P53784 Gm14018-201ENSMUST00000119042 455 ntBASIC6.38□□□□□ -1.39
Sox3P53784 Gm7700-201ENSMUST00000120273 970 ntBASIC6.38□□□□□ -1.39
Sox3P53784 Gm16079-201ENSMUST00000149065 578 ntTSL 3 BASIC6.38□□□□□ -1.39
Sox3P53784 Gm25435-201ENSMUST00000158277 267 ntBASIC6.38□□□□□ -1.39
Sox3P53784 Gm17059-201ENSMUST00000168284 519 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Sox3P53784 Gm17048-201ENSMUST00000179266 847 ntBASIC6.38□□□□□ -1.39
Sox3P53784 Gm5345-201ENSMUST00000183076 1014 ntBASIC6.38□□□□□ -1.39
Sox3P53784 Gm27227-201ENSMUST00000183413 633 ntTSL 3 BASIC6.38□□□□□ -1.39
Sox3P53784 Gm27960-201ENSMUST00000183445 184 ntBASIC6.38□□□□□ -1.39
Sox3P53784 Gm28998-201ENSMUST00000186194 919 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Sox3P53784 Gm28237-201ENSMUST00000186563 641 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Sox3P53784 Gm28576-201ENSMUST00000189007 919 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Sox3P53784 Gm28425-202ENSMUST00000191542 621 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Sox3P53784 Gm6077-201ENSMUST00000196008 499 ntBASIC6.38□□□□□ -1.39
Sox3P53784 Gm36840-201ENSMUST00000202688 250 ntTSL 3 BASIC6.38□□□□□ -1.39
Sox3P53784 Gm7706-201ENSMUST00000209946 388 ntTSL 3 BASIC6.38□□□□□ -1.39
Sox3P53784 Gm39317-201ENSMUST00000213360 1138 ntTSL 5 BASIC6.38□□□□□ -1.39
Sox3P53784 Gm9869-202ENSMUST00000214999 679 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Sox3P53784 Gm5119-201ENSMUST00000215858 634 ntBASIC6.38□□□□□ -1.39
Sox3P53784 AC160138.1-201ENSMUST00000217965 588 ntTSL 3 BASIC6.38□□□□□ -1.39
Sox3P53784 D830013O20Rik-202ENSMUST00000221180 683 ntTSL 2 BASIC6.38□□□□□ -1.39
Sox3P53784 AC124595.1-201ENSMUST00000221799 646 ntTSL 3 BASIC6.38□□□□□ -1.39
Sox3P53784 Vmn1r41-202ENSMUST00000226337 888 ntBASIC6.38□□□□□ -1.39
Sox3P53784 Vmn1r41-203ENSMUST00000226562 1046 ntBASIC6.38□□□□□ -1.39
Sox3P53784 Mlip-201ENSMUST00000034910 1227 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Sox3P53784 Olfr267-201ENSMUST00000059608 944 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Sox3P53784 Olfr195-201ENSMUST00000075381 995 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Sox3P53784 Clec2g-202ENSMUST00000075789 729 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Sox3P53784 Tcl1b2-201ENSMUST00000081379 1009 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Sox3P53784 Gm16020-201ENSMUST00000084281 210 ntBASIC6.38□□□□□ -1.39
Sox3P53784 Olfr1306-201ENSMUST00000099607 939 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Sox3P53784 Olfr1055-203ENSMUST00000213564 1444 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Sox3P53784 Wdr35-202ENSMUST00000111113 4312 ntAPPRIS ALT1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Sox3P53784 Gm18359-201ENSMUST00000173024 1459 ntBASIC6.38□□□□□ -1.39
Sox3P53784 Gm40987-202ENSMUST00000221856 1588 ntTSL 5 BASIC6.38□□□□□ -1.39
Sox3P53784 Scn8a-205ENSMUST00000108910 11232 ntAPPRIS ALT1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Sox3P53784 Cyp2c68-201ENSMUST00000099472 1724 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Sox3P53784 Psg18-202ENSMUST00000098783 1783 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Sox3P53784 Gabpb1-201ENSMUST00000039978 1991 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Sox3P53784 Gm42763-201ENSMUST00000199595 2087 ntBASIC6.38□□□□□ -1.39
Sox3P53784 Cyp4a10-202ENSMUST00000094886 2052 ntAPPRIS ALT2 TSL 2 BASIC6.38□□□□□ -1.39
Sox3P53784 Lipk-201ENSMUST00000054260 2125 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Sox3P53784 Amot-202ENSMUST00000112836 6957 ntAPPRIS P2 TSL 5 BASIC6.38□□□□□ -1.39
Sox3P53784 1810064F22Rik-203ENSMUST00000188595 2307 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Sox3P53784 Gm42940-201ENSMUST00000200361 2362 ntBASIC6.38□□□□□ -1.39
Sox3P53784 Dennd6a-204ENSMUST00000224248 2775 ntBASIC6.38□□□□□ -1.39
Sox3P53784 Ctage5-209ENSMUST00000175912 2885 ntTSL 5 BASIC6.38□□□□□ -1.39
Sox3P53784 Dnah17-203ENSMUST00000106308 14973 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
Sox3P53784 Gm19667-201ENSMUST00000188984 3334 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Sox3P53784 Gm44677-201ENSMUST00000209151 3739 ntBASIC6.38□□□□□ -1.39
Sox3P53784 Ezh1-203ENSMUST00000107285 4193 ntAPPRIS P2 TSL 1 (best) BASIC6.38□□□□□ -1.39
Sox3P53784 Pde1c-206ENSMUST00000166890 4728 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Sox3P53784 Pik3r3-201ENSMUST00000030464 5257 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Sox3P53784 Zfp799-205ENSMUST00000202988 6012 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Sox3P53784 Rabgap1l-202ENSMUST00000028052 6338 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Sox3P53784 Mrpl48-208ENSMUST00000150042 4285 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Sox3P53784 Sema6a-202ENSMUST00000076043 4123 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Sox3P53784 Tmprss15-202ENSMUST00000060402 3681 ntAPPRIS ALT2 TSL 2 BASIC6.37□□□□□ -1.39
Sox3P53784 Pum2-204ENSMUST00000163569 3560 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
Sox3P53784 Haus2-202ENSMUST00000110706 3055 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Sox3P53784 Ptpra-202ENSMUST00000077303 3066 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Sox3P53784 A4gnt-201ENSMUST00000042553 2757 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Sox3P53784 Olfr90-206ENSMUST00000217397 2680 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Sox3P53784 Gm42711-201ENSMUST00000197060 2302 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Sox3P53784 Gm3752-201ENSMUST00000164366 1817 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Sox3P53784 Gm8878-201ENSMUST00000173552 1725 ntBASIC6.37□□□□□ -1.39
Sox3P53784 Gm5175-201ENSMUST00000218458 1703 ntTSL 5 BASIC6.37□□□□□ -1.39
Sox3P53784 Cyp2c67-201ENSMUST00000067328 1732 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Sox3P53784 Fam227b-202ENSMUST00000110448 1693 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
Sox3P53784 Fbxw28-202ENSMUST00000112040 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
Sox3P53784 Olfr571-202ENSMUST00000214160 4999 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Sox3P53784 Gm13416-201ENSMUST00000117264 1612 ntBASIC6.37□□□□□ -1.39
Sox3P53784 Gm5512-202ENSMUST00000220222 1522 ntBASIC6.37□□□□□ -1.39
Sox3P53784 Olfr770-204ENSMUST00000204712 1460 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Sox3P53784 Pcdh15-205ENSMUST00000105429 6719 ntTSL 5 BASIC6.37□□□□□ -1.39
Sox3P53784 Hnrnpc-207ENSMUST00000227536 1301 ntBASIC6.37□□□□□ -1.39
Sox3P53784 Mir674-201ENSMUST00000102421 100 ntBASIC6.37□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 52.1 ms