Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 C1s1-203ENSMUST00000160505 2946 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Col18a1P39061 Sncaip-206ENSMUST00000178678 3724 ntAPPRIS ALT2 TSL 1 (best) BASIC8.7□□□□□ -1.02
Col18a1P39061 Gm37762-201ENSMUST00000194515 3561 ntBASIC8.7□□□□□ -1.02
Col18a1P39061 Sprr2a3-202ENSMUST00000193337 2880 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Col18a1P39061 Gas2l3-202ENSMUST00000105298 6305 ntAPPRIS P2 TSL 1 (best) BASIC8.7□□□□□ -1.02
Col18a1P39061 Rapgef5-206ENSMUST00000222185 5508 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Col18a1P39061 Skint10-201ENSMUST00000060327 1376 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Col18a1P39061 Mir466f-3-201ENSMUST00000104788 94 ntBASIC8.7□□□□□ -1.02
Col18a1P39061 Gm13887-201ENSMUST00000119009 344 ntBASIC8.7□□□□□ -1.02
Col18a1P39061 Platr28-201ENSMUST00000133824 1294 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Col18a1P39061 Gm23280-201ENSMUST00000157905 139 ntBASIC8.7□□□□□ -1.02
Col18a1P39061 Gm17142-201ENSMUST00000164933 645 ntBASIC8.7□□□□□ -1.02
Col18a1P39061 Gm26653-201ENSMUST00000181537 1214 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Col18a1P39061 Mir6362-201ENSMUST00000184329 107 ntBASIC8.7□□□□□ -1.02
Col18a1P39061 Ms4a12-201ENSMUST00000186228 792 ntAPPRIS P1 TSL 5 BASIC8.7□□□□□ -1.02
Col18a1P39061 Gm18752-201ENSMUST00000192876 608 ntBASIC8.7□□□□□ -1.02
Col18a1P39061 Mir6994-201ENSMUST00000198985 73 ntBASIC8.7□□□□□ -1.02
Col18a1P39061 Gm33601-201ENSMUST00000210001 961 ntBASIC8.7□□□□□ -1.02
Col18a1P39061 Gm17997-201ENSMUST00000211801 840 ntBASIC8.7□□□□□ -1.02
Col18a1P39061 Gm8863-201ENSMUST00000216630 926 ntBASIC8.7□□□□□ -1.02
Col18a1P39061 Spata9-201ENSMUST00000022081 1057 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Col18a1P39061 4930549C15Rik-201ENSMUST00000221235 1260 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Col18a1P39061 AC168056.2-201ENSMUST00000223591 269 ntBASIC8.7□□□□□ -1.02
Col18a1P39061 Mir337-201ENSMUST00000083592 97 ntBASIC8.7□□□□□ -1.02
Col18a1P39061 Gm20560-201ENSMUST00000204577 3513 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Col18a1P39061 Gm10778-202ENSMUST00000189672 4735 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Col18a1P39061 Gm37943-201ENSMUST00000194053 3944 ntBASIC8.7□□□□□ -1.02
Col18a1P39061 Edar-201ENSMUST00000003312 3637 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Col18a1P39061 Gm28231-201ENSMUST00000190118 2599 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Col18a1P39061 Musk-201ENSMUST00000081919 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC8.7□□□□□ -1.02
Col18a1P39061 Slc16a14-201ENSMUST00000027422 3207 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Col18a1P39061 P2ry12-201ENSMUST00000050360 2250 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Col18a1P39061 Klf12-205ENSMUST00000228216 5890 ntAPPRIS P1 BASIC8.7□□□□□ -1.02
Col18a1P39061 Naalad2-201ENSMUST00000001826 2831 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Col18a1P39061 AL670757.1-201ENSMUST00000223668 1959 ntBASIC8.69□□□□□ -1.02
Col18a1P39061 Magi2-207ENSMUST00000197553 3264 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Col18a1P39061 Apc-203ENSMUST00000115781 12346 ntAPPRIS ALT2 TSL 5 BASIC8.69□□□□□ -1.02
Col18a1P39061 Gm38155-201ENSMUST00000192285 2763 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Col18a1P39061 Thrb-201ENSMUST00000022303 4532 ntAPPRIS P1 TSL 5 BASIC8.69□□□□□ -1.02
Col18a1P39061 Gm19125-201ENSMUST00000188408 1383 ntBASIC8.69□□□□□ -1.02
Col18a1P39061 Star-201ENSMUST00000033979 4046 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Col18a1P39061 Defb47-201ENSMUST00000100492 359 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Col18a1P39061 Lrrc51-205ENSMUST00000106965 743 ntTSL 3 BASIC8.69□□□□□ -1.02
Col18a1P39061 Gm14267-201ENSMUST00000119751 496 ntBASIC8.69□□□□□ -1.02
Col18a1P39061 4930519D14Rik-201ENSMUST00000151471 1137 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Col18a1P39061 Wfdc15b-203ENSMUST00000164567 497 ntAPPRIS P1 TSL 2 BASIC8.69□□□□□ -1.02
Col18a1P39061 Gm22420-201ENSMUST00000178795 126 ntBASIC8.69□□□□□ -1.02
Col18a1P39061 Gm28017-201ENSMUST00000183434 126 ntBASIC8.69□□□□□ -1.02
Col18a1P39061 Gm29596-201ENSMUST00000185710 385 ntBASIC8.69□□□□□ -1.02
Col18a1P39061 4933404I11Rik-201ENSMUST00000190294 1202 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Col18a1P39061 Gm17838-201ENSMUST00000205872 876 ntBASIC8.69□□□□□ -1.02
Col18a1P39061 Gm45820-201ENSMUST00000212068 362 ntTSL 3 BASIC8.69□□□□□ -1.02
Col18a1P39061 Olfr923-204ENSMUST00000219798 1068 ntBASIC8.69□□□□□ -1.02
Col18a1P39061 Gm8613-201ENSMUST00000220383 1077 ntBASIC8.69□□□□□ -1.02
Col18a1P39061 CT030194.1-201ENSMUST00000225507 532 ntBASIC8.69□□□□□ -1.02
Col18a1P39061 Olfr923-201ENSMUST00000051238 1068 ntAPPRIS P1 BASIC8.69□□□□□ -1.02
Col18a1P39061 Gm1604b-201ENSMUST00000089120 357 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Col18a1P39061 Spink13-201ENSMUST00000097557 796 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Col18a1P39061 Olfr556-201ENSMUST00000098219 1023 ntAPPRIS P1 BASIC8.69□□□□□ -1.02
Col18a1P39061 Papolg-201ENSMUST00000020513 3747 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Col18a1P39061 Cfhr2-201ENSMUST00000094489 1609 ntAPPRIS P2 TSL 1 (best) BASIC8.69□□□□□ -1.02
Col18a1P39061 Gm1965-202ENSMUST00000161362 2405 ntTSL 2 BASIC8.69□□□□□ -1.02
Col18a1P39061 Myh4-202ENSMUST00000170942 5912 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Col18a1P39061 Perm1-201ENSMUST00000105572 3901 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Col18a1P39061 Paqr8-201ENSMUST00000068880 4704 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Col18a1P39061 Wnk1-218ENSMUST00000161512 1426 ntBASIC8.69□□□□□ -1.02
Col18a1P39061 Olfr558-201ENSMUST00000094124 3041 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Col18a1P39061 Eif2ak4-204ENSMUST00000110870 5116 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Col18a1P39061 Son-202ENSMUST00000114037 8399 ntAPPRIS P2 TSL 1 (best) BASIC8.69□□□□□ -1.02
Col18a1P39061 Gm5431-203ENSMUST00000109212 3063 ntAPPRIS P1 TSL 5 BASIC8.69□□□□□ -1.02
Col18a1P39061 Slc6a18-202ENSMUST00000109679 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC8.69□□□□□ -1.02
Col18a1P39061 Psg16-202ENSMUST00000118367 2282 ntAPPRIS P3 TSL 1 (best) BASIC8.69□□□□□ -1.02
Col18a1P39061 1700071M16Rik-203ENSMUST00000169733 2504 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Col18a1P39061 Tom1l1-204ENSMUST00000107869 1826 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Col18a1P39061 Cldn12-202ENSMUST00000115445 3477 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Col18a1P39061 Gm26606-201ENSMUST00000181292 2439 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Col18a1P39061 Cyp4a10-202ENSMUST00000094886 2052 ntAPPRIS ALT2 TSL 2 BASIC8.69□□□□□ -1.02
Col18a1P39061 Krcc1-202ENSMUST00000168700 1749 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Col18a1P39061 Bdnf-210ENSMUST00000111051 4125 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Col18a1P39061 Epb41l2-202ENSMUST00000092645 4280 ntAPPRIS P2 TSL 5 BASIC8.69□□□□□ -1.02
Col18a1P39061 Ncoa2-203ENSMUST00000081713 8171 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Col18a1P39061 Gm13007-201ENSMUST00000121866 365 ntBASIC8.68□□□□□ -1.02
Col18a1P39061 Gimap4-205ENSMUST00000121957 775 ntTSL 2 BASIC8.68□□□□□ -1.02
Col18a1P39061 Gm2800-201ENSMUST00000122988 641 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Col18a1P39061 Olfr377-ps1-201ENSMUST00000134011 1136 ntAPPRIS P1 TSL 3 BASIC8.68□□□□□ -1.02
Col18a1P39061 Gm28438-201ENSMUST00000188299 345 ntBASIC8.68□□□□□ -1.02
Col18a1P39061 Gm7626-201ENSMUST00000195801 353 ntBASIC8.68□□□□□ -1.02
Col18a1P39061 Myo7b-201ENSMUST00000134663 6621 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Col18a1P39061 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC8.68□□□□□ -1.02
Col18a1P39061 Gm42397-205ENSMUST00000208692 1449 ntTSL 5 BASIC8.68□□□□□ -1.02
Col18a1P39061 Olfr495-201ENSMUST00000210990 1440 ntAPPRIS P1 BASIC8.68□□□□□ -1.02
Col18a1P39061 Rsrc2-219ENSMUST00000182955 1685 ntTSL 5 BASIC8.68□□□□□ -1.02
Col18a1P39061 Gm28704-201ENSMUST00000186589 2169 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Col18a1P39061 Gm29636-201ENSMUST00000188149 2169 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Col18a1P39061 Gm43292-201ENSMUST00000199580 2449 ntBASIC8.68□□□□□ -1.02
Col18a1P39061 Olfr1351-202ENSMUST00000216030 2489 ntAPPRIS P1 TSL 3 BASIC8.68□□□□□ -1.02
Col18a1P39061 Eml1-201ENSMUST00000054955 3879 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Col18a1P39061 Rp1l1-201ENSMUST00000058229 6684 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Col18a1P39061 Olfr11-202ENSMUST00000205631 3265 ntAPPRIS P1 TSL 3 BASIC8.68□□□□□ -1.02
Col18a1P39061 Vmn2r-ps26-201ENSMUST00000202039 2111 ntBASIC8.68□□□□□ -1.02
Retrieved 100 of 76,532 protein–RNA pairs in 67.8 ms