Protein–RNA interactions for Protein: P09631

Hoxa9, Homeobox protein Hox-A9, mousemouse

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa9P09631 Gm7961-201ENSMUST00000201338 1436 ntBASIC6.73□□□□□ -1.33
Hoxa9P09631 Ctsr-201ENSMUST00000021889 1414 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Hoxa9P09631 Scn3b-203ENSMUST00000171835 4024 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Hoxa9P09631 Gm11346-204ENSMUST00000149751 2893 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Hoxa9P09631 Rps15a-207ENSMUST00000172457 5130 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Hoxa9P09631 Tti1-201ENSMUST00000029179 3830 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Hoxa9P09631 Gm136-201ENSMUST00000095129 1311 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Hoxa9P09631 Triml1-201ENSMUST00000059692 1850 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Hoxa9P09631 Fbxw19-201ENSMUST00000076617 1483 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Hoxa9P09631 Kcnc2-202ENSMUST00000218445 4033 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Hoxa9P09631 Birc6-204ENSMUST00000182133 14604 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
Hoxa9P09631 Birc6-215ENSMUST00000182597 14649 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
Hoxa9P09631 Birc6-220ENSMUST00000182944 14610 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
Hoxa9P09631 Gm37755-201ENSMUST00000195880 2179 ntBASIC6.72□□□□□ -1.33
Hoxa9P09631 Itch-201ENSMUST00000029126 5159 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Hoxa9P09631 Vmn2r3-202ENSMUST00000176328 2748 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
Hoxa9P09631 Bank1-201ENSMUST00000041577 3268 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
Hoxa9P09631 Mllt10-202ENSMUST00000114669 3865 ntTSL 5 BASIC6.72□□□□□ -1.33
Hoxa9P09631 Spag9-203ENSMUST00000075695 6910 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Hoxa9P09631 Gm6811-201ENSMUST00000169389 1533 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Hoxa9P09631 Gm44186-201ENSMUST00000204118 2752 ntBASIC6.72□□□□□ -1.33
Hoxa9P09631 Hspg2-201ENSMUST00000030547 14187 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
Hoxa9P09631 Pcmtd2-202ENSMUST00000108754 3499 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Hoxa9P09631 Gm9894-201ENSMUST00000171257 2904 ntBASIC6.72□□□□□ -1.33
Hoxa9P09631 Thnsl1-203ENSMUST00000102952 1679 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Hoxa9P09631 Kirrel3os-201ENSMUST00000066604 3799 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Hoxa9P09631 Olfr633-202ENSMUST00000216006 3915 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Hoxa9P09631 Zwint-202ENSMUST00000105431 2676 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Hoxa9P09631 Gm24709-201ENSMUST00000104123 132 ntBASIC6.72□□□□□ -1.33
Hoxa9P09631 Gm7113-201ENSMUST00000120477 958 ntBASIC6.72□□□□□ -1.33
Hoxa9P09631 Gm12438-201ENSMUST00000122034 336 ntBASIC6.72□□□□□ -1.33
Hoxa9P09631 Gm24383-201ENSMUST00000122691 333 ntBASIC6.72□□□□□ -1.33
Hoxa9P09631 Gm15217-202ENSMUST00000141358 347 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
Hoxa9P09631 Gm13322-201ENSMUST00000152803 246 ntTSL 5 BASIC6.72□□□□□ -1.33
Hoxa9P09631 Gm17096-201ENSMUST00000172037 733 ntTSL 5 BASIC6.72□□□□□ -1.33
Hoxa9P09631 Gm27158-201ENSMUST00000183813 238 ntBASIC6.72□□□□□ -1.33
Hoxa9P09631 Ms4a5-202ENSMUST00000186937 816 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Hoxa9P09631 Gm18447-201ENSMUST00000187501 307 ntBASIC6.72□□□□□ -1.33
Hoxa9P09631 Snurf-201ENSMUST00000194059 216 ntAPPRIS P1 TSL 2 BASIC6.72□□□□□ -1.33
Hoxa9P09631 Gm43383-201ENSMUST00000195981 469 ntBASIC6.72□□□□□ -1.33
Hoxa9P09631 Gm9710-201ENSMUST00000198053 499 ntBASIC6.72□□□□□ -1.33
Hoxa9P09631 Tbc1d24-213ENSMUST00000201805 3806 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Hoxa9P09631 Gm32983-201ENSMUST00000208500 505 ntBASIC6.72□□□□□ -1.33
Hoxa9P09631 Gm7769-201ENSMUST00000212900 933 ntBASIC6.72□□□□□ -1.33
Hoxa9P09631 Gm8637-201ENSMUST00000212919 1085 ntBASIC6.72□□□□□ -1.33
Hoxa9P09631 AC157085.1-201ENSMUST00000216343 162 ntBASIC6.72□□□□□ -1.33
Hoxa9P09631 Gm35274-201ENSMUST00000217709 646 ntTSL 5 BASIC6.72□□□□□ -1.33
Hoxa9P09631 AC158750.1-201ENSMUST00000226163 634 ntBASIC6.72□□□□□ -1.33
Hoxa9P09631 Ms4a5-201ENSMUST00000067673 1005 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Hoxa9P09631 Olfr687-201ENSMUST00000098154 938 ntBASIC6.72□□□□□ -1.33
Hoxa9P09631 Olfr1275-202ENSMUST00000216421 2418 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Hoxa9P09631 Aass-201ENSMUST00000031707 3701 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Hoxa9P09631 Gm38070-201ENSMUST00000191850 6480 ntBASIC6.72□□□□□ -1.33
Hoxa9P09631 Zfp157-201ENSMUST00000085856 5312 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Hoxa9P09631 C330024D21Rik-202ENSMUST00000202634 2020 ntTSL 2 BASIC6.72□□□□□ -1.33
Hoxa9P09631 Ttll6-201ENSMUST00000107680 3485 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
Hoxa9P09631 Gm8822-201ENSMUST00000118948 2347 ntBASIC6.72□□□□□ -1.33
Hoxa9P09631 Gm33167-201ENSMUST00000201933 2643 ntBASIC6.72□□□□□ -1.33
Hoxa9P09631 Ms4a1-201ENSMUST00000169159 3075 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Hoxa9P09631 Zmat3-201ENSMUST00000029199 7797 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Hoxa9P09631 Dnajc15-202ENSMUST00000226459 6193 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Hoxa9P09631 Ksr2-202ENSMUST00000180430 13125 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Hoxa9P09631 Gm13416-201ENSMUST00000117264 1612 ntBASIC6.72□□□□□ -1.33
Hoxa9P09631 Sp110-201ENSMUST00000093508 1921 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Hoxa9P09631 Gm15448-202ENSMUST00000108619 2097 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
Hoxa9P09631 Vmn1r52-204ENSMUST00000227578 2370 ntBASIC6.72□□□□□ -1.33
Hoxa9P09631 Golph3l-207ENSMUST00000177390 2836 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Hoxa9P09631 Olfr190-203ENSMUST00000216495 8240 ntAPPRIS P1 TSL 3 BASIC6.72□□□□□ -1.33
Hoxa9P09631 Add3-203ENSMUST00000111741 4520 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.33
Hoxa9P09631 Tcf7l2-209ENSMUST00000111656 3629 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.33
Hoxa9P09631 Gm9226-201ENSMUST00000188352 3489 ntBASIC6.71□□□□□ -1.33
Hoxa9P09631 Gm17354-201ENSMUST00000170933 3039 ntTSL 5 BASIC6.71□□□□□ -1.33
Hoxa9P09631 4732465J04Rik-202ENSMUST00000187483 2744 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
Hoxa9P09631 Vmn2r58-201ENSMUST00000171671 2589 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.33
Hoxa9P09631 Trim43b-202ENSMUST00000189557 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.33
Hoxa9P09631 Foxp2-209ENSMUST00000131414 1381 ntTSL 5 BASIC6.71□□□□□ -1.33
Hoxa9P09631 St18-212ENSMUST00000151281 3533 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
Hoxa9P09631 Olfr97-205ENSMUST00000214848 1861 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
Hoxa9P09631 Gm24069-201ENSMUST00000104512 127 ntBASIC6.71□□□□□ -1.34
Hoxa9P09631 Gm14018-201ENSMUST00000119042 455 ntBASIC6.71□□□□□ -1.34
Hoxa9P09631 Gm15502-201ENSMUST00000121449 208 ntBASIC6.71□□□□□ -1.34
Hoxa9P09631 Gm13642-201ENSMUST00000121697 381 ntBASIC6.71□□□□□ -1.34
Hoxa9P09631 Gm12833-201ENSMUST00000136112 477 ntBASIC6.71□□□□□ -1.34
Hoxa9P09631 Mir3471-2-201ENSMUST00000174896 102 ntBASIC6.71□□□□□ -1.34
Hoxa9P09631 Gm27348-201ENSMUST00000184511 170 ntBASIC6.71□□□□□ -1.34
Hoxa9P09631 Gm27998-201ENSMUST00000184902 361 ntBASIC6.71□□□□□ -1.34
Hoxa9P09631 1700006H21Rik-201ENSMUST00000188490 627 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Hoxa9P09631 Gm37068-201ENSMUST00000195168 640 ntTSL 3 BASIC6.71□□□□□ -1.34
Hoxa9P09631 Gm2602-201ENSMUST00000202112 571 ntBASIC6.71□□□□□ -1.34
Hoxa9P09631 1600020E01Rik-208ENSMUST00000205028 329 ntTSL 5 BASIC6.71□□□□□ -1.34
Hoxa9P09631 Mobp-206ENSMUST00000214943 435 ntAPPRIS P1 TSL 3 BASIC6.71□□□□□ -1.34
Hoxa9P09631 Gm46364-201ENSMUST00000218548 319 ntBASIC6.71□□□□□ -1.34
Hoxa9P09631 Gm40645-202ENSMUST00000219828 874 ntTSL 5 BASIC6.71□□□□□ -1.34
Hoxa9P09631 CT030175.1-201ENSMUST00000220822 408 ntBASIC6.71□□□□□ -1.34
Hoxa9P09631 AC131187.2-201ENSMUST00000223936 994 ntBASIC6.71□□□□□ -1.34
Hoxa9P09631 AC154573.2-201ENSMUST00000224174 378 ntBASIC6.71□□□□□ -1.34
Hoxa9P09631 AC156559.2-201ENSMUST00000224403 384 ntBASIC6.71□□□□□ -1.34
Hoxa9P09631 Cma2-202ENSMUST00000228263 857 ntBASIC6.71□□□□□ -1.34
Hoxa9P09631 AC154757.2-201ENSMUST00000228885 743 ntBASIC6.71□□□□□ -1.34
Hoxa9P09631 Olfr282-201ENSMUST00000075851 928 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 68.3 ms